RNA–Protein interactions for RNA: ENST00000470575.5

SFMBT1-202, Transcript of Scm like with four mbt domains 1, humanhuman

TSL 2

Gene SFMBT1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-202ENST00000470575 RNF123Q5XPI4 1314 aa23.88■■□□□ 1.41
SFMBT1-202ENST00000470575 IQCA1LA6NCM1 817 aa23.88■■□□□ 1.41
SFMBT1-202ENST00000470575 TCERG1O14776 1098 aaKnown RBP23.88■■□□□ 1.41
SFMBT1-202ENST00000470575 NTSR2O95665 410 aa23.88■■□□□ 1.41
SFMBT1-202ENST00000470575 EAPPQ56P03 285 aaPredicted RBP23.88■■□□□ 1.41
SFMBT1-202ENST00000470575 LRP10Q7Z4F1 713 aa23.88■■□□□ 1.41
SFMBT1-202ENST00000470575 RPGRQ92834 1020 aaKnown RBP23.88■■□□□ 1.41
SFMBT1-202ENST00000470575 MKRN1Q9UHC7 482 aaKnown RBP23.88■■□□□ 1.41
SFMBT1-202ENST00000470575 SCN4AP35499 1836 aa23.88■■□□□ 1.41
SFMBT1-202ENST00000470575 PDIA6Q15084 440 aa23.87■■□□□ 1.41
SFMBT1-202ENST00000470575 CCDC146Q8IYE0 955 aa23.87■■□□□ 1.41
SFMBT1-202ENST00000470575 ZNF34Q8IZ26 560 aa23.87■■□□□ 1.41
SFMBT1-202ENST00000470575 NECTIN2Q92692 538 aa23.87■■□□□ 1.41
SFMBT1-202ENST00000470575 ERBB4Q15303 1308 aa23.86■■□□□ 1.41
SFMBT1-202ENST00000470575 RIC1Q4ADV7 1423 aa23.86■■□□□ 1.41
SFMBT1-202ENST00000470575 GIGYF2Q6Y7W6 1299 aaKnown RBP23.86■■□□□ 1.41
SFMBT1-202ENST00000470575 LDHDQ86WU2 507 aa23.86■■□□□ 1.41
SFMBT1-202ENST00000470575 TMPOP42166 694 aaKnown RBP23.85■■□□□ 1.41
SFMBT1-202ENST00000470575 CREBZFQ9NS37 354 aa23.85■■□□□ 1.41
SFMBT1-202ENST00000470575 FZD9O00144 591 aa23.84■■□□□ 1.41
SFMBT1-202ENST00000470575 NEUROD2Q15784 382 aa23.84■■□□□ 1.41
SFMBT1-202ENST00000470575 KRT24Q2M2I5 525 aa23.84■■□□□ 1.41
SFMBT1-202ENST00000470575 HACL1Q9UJ83 578 aa23.84■■□□□ 1.41
SFMBT1-202ENST00000470575 PASKQ96RG2 1323 aa23.84■■□□□ 1.41
SFMBT1-202ENST00000470575 ADAMTSL1Q8N6G6 1762 aa23.83■■□□□ 1.41
SFMBT1-202ENST00000470575 PPEF1O14829 653 aaPredicted RBP23.83■■□□□ 1.41
SFMBT1-202ENST00000470575 EPHX2P34913 555 aa23.83■■□□□ 1.41
SFMBT1-202ENST00000470575 PSMD1Q99460 953 aa23.83■■□□□ 1.41
SFMBT1-202ENST00000470575 HOXA10P31260 410 aaPredicted RBP23.82■■□□□ 1.4
SFMBT1-202ENST00000470575 ZNF428Q96B54 188 aa23.82■■□□□ 1.4
SFMBT1-202ENST00000470575 AIMP1Q12904 312 aaKnown RBP23.81■■□□□ 1.4
SFMBT1-202ENST00000470575 PPP1R42Q7Z4L9 355 aa23.81■■□□□ 1.4
SFMBT1-202ENST00000470575 RBM17Q96I25 401 aaKnown RBP23.81■■□□□ 1.4
SFMBT1-202ENST00000470575 CLEC11AQ9Y240 323 aa23.81■■□□□ 1.4
SFMBT1-202ENST00000470575 GJA3Q9Y6H8 435 aa23.81■■□□□ 1.4
SFMBT1-202ENST00000470575 LTBP1Q14766 1721 aa23.81■■□□□ 1.4
SFMBT1-202ENST00000470575 DIEXFQ68CQ4 756 aaKnown RBP23.8■■□□□ 1.4
SFMBT1-202ENST00000470575 JDP2Q8WYK2 163 aa23.8■■□□□ 1.4
SFMBT1-202ENST00000470575 ANKRD36CQ5JPF3 1778 aa23.8■■□□□ 1.4
SFMBT1-202ENST00000470575 CAPN15O75808 1086 aa23.79■■□□□ 1.4
SFMBT1-202ENST00000470575 LMOD3Q0VAK6 560 aa23.79■■□□□ 1.4
SFMBT1-202ENST00000470575 PARP10Q53GL7 1025 aa23.79■■□□□ 1.4
SFMBT1-202ENST00000470575 GPC2Q8N158 579 aa23.79■■□□□ 1.4
SFMBT1-202ENST00000470575 XAGE3Q8WTP9 111 aa23.79■■□□□ 1.4
SFMBT1-202ENST00000470575 CRAMP1Q96RY5 1269 aa23.79■■□□□ 1.4
SFMBT1-202ENST00000470575 UTP14AQ9BVJ6 771 aaKnown RBP23.79■■□□□ 1.4
SFMBT1-202ENST00000470575 LAS1LQ9Y4W2 734 aaKnown RBP23.79■■□□□ 1.4
SFMBT1-202ENST00000470575 CNTNAP1P78357 1384 aa23.78■■□□□ 1.4
SFMBT1-202ENST00000470575 ITGBL1O95965 494 aaPredicted RBP23.78■■□□□ 1.4
SFMBT1-202ENST00000470575 MAP1SQ66K74 1059 aaPredicted RBP23.78■■□□□ 1.4
SFMBT1-202ENST00000470575 CC2D2BQ6DHV5 1058 aa23.78■■□□□ 1.4
SFMBT1-202ENST00000470575 COPS6Q7L5N1 327 aa23.78■■□□□ 1.4
SFMBT1-202ENST00000470575 TNS4Q8IZW8 715 aa23.78■■□□□ 1.4
SFMBT1-202ENST00000470575 LARGE2Q8N3Y3 721 aa23.78■■□□□ 1.4
SFMBT1-202ENST00000470575 LAMB2P55268 1798 aa23.78■■□□□ 1.4
SFMBT1-202ENST00000470575 EIF6P56537 245 aaKnown RBP23.77■■□□□ 1.4
SFMBT1-202ENST00000470575 NLRP3Q96P20 1036 aa23.77■■□□□ 1.4
SFMBT1-202ENST00000470575 ABCC4O15439 1325 aa23.77■■□□□ 1.4
SFMBT1-202ENST00000470575 CCDC184Q52MB2 194 aa23.76■■□□□ 1.39
SFMBT1-202ENST00000470575 HCLS1P14317 486 aaPredicted RBP23.75■■□□□ 1.39
SFMBT1-202ENST00000470575 WDR43Q15061 677 aaKnown RBP eCLIP23.75■■□□□ 1.39
SFMBT1-202ENST00000470575 AOC3Q16853 763 aa23.75■■□□□ 1.39
SFMBT1-202ENST00000470575 BABAM1Q9NWV8 329 aa23.75■■□□□ 1.39
SFMBT1-202ENST00000470575 TRIM35Q9UPQ4 493 aa23.75■■□□□ 1.39
SFMBT1-202ENST00000470575 TMEM88BA6NKF7 163 aa23.74■■□□□ 1.39
SFMBT1-202ENST00000470575 PPIP5K2O43314 1243 aa23.74■■□□□ 1.39
SFMBT1-202ENST00000470575 SCNN1DP51172 638 aa23.74■■□□□ 1.39
SFMBT1-202ENST00000470575 NLRP10Q86W26 655 aa23.74■■□□□ 1.39
SFMBT1-202ENST00000470575 CHPF2Q9P2E5 772 aa23.74■■□□□ 1.39
SFMBT1-202ENST00000470575 PNMA8AQ86V59 439 aaPredicted RBP23.73■■□□□ 1.39
SFMBT1-202ENST00000470575 NIM1KQ8IY84 436 aa23.73■■□□□ 1.39
SFMBT1-202ENST00000470575 CNTROBQ8N137 903 aa23.73■■□□□ 1.39
SFMBT1-202ENST00000470575 MRS2Q9HD23 443 aa23.73■■□□□ 1.39
SFMBT1-202ENST00000470575 CHL1O00533 1208 aa23.72■■□□□ 1.39
SFMBT1-202ENST00000470575 EPS15P42566 896 aa23.72■■□□□ 1.39
SFMBT1-202ENST00000470575 SLC10A5Q5PT55 438 aa23.72■■□□□ 1.39
SFMBT1-202ENST00000470575 DDX21Q9NR30 783 aaKnown RBP eCLIP23.72■■□□□ 1.39
SFMBT1-202ENST00000470575 ATP6V0A2Q9Y487 856 aa23.72■■□□□ 1.39
SFMBT1-202ENST00000470575 LMOD1P29536 600 aaPredicted RBP23.71■■□□□ 1.39
SFMBT1-202ENST00000470575 VEGFBP49765 207 aa23.71■■□□□ 1.39
SFMBT1-202ENST00000470575 FMR1Q06787 632 aaKnown RBP eCLIP23.71■■□□□ 1.39
SFMBT1-202ENST00000470575 HSP90AB3PQ58FF7 597 aa23.71■■□□□ 1.39
SFMBT1-202ENST00000470575 RUNDC1Q96C34 613 aa23.71■■□□□ 1.39
SFMBT1-202ENST00000470575 ADAMTS8Q9UP79 889 aa23.71■■□□□ 1.39
SFMBT1-202ENST00000470575 TCIRG1Q13488 830 aa23.7■■□□□ 1.38
SFMBT1-202ENST00000470575 TRMT112Q9UI30 125 aaKnown RBP23.7■■□□□ 1.38
SFMBT1-202ENST00000470575 TAF1P21675 1872 aa23.69■■□□□ 1.38
SFMBT1-202ENST00000470575 FOXN1O15353 648 aa23.69■■□□□ 1.38
SFMBT1-202ENST00000470575 GRIPAP1Q4V328 841 aa23.69■■□□□ 1.38
SFMBT1-202ENST00000470575 HDGFL1Q5TGJ6 251 aa23.69■■□□□ 1.38
SFMBT1-202ENST00000470575 SH3TC1Q8TE82 1336 aa23.68■■□□□ 1.38
SFMBT1-202ENST00000470575 TMX4Q9H1E5 349 aaPredicted RBP23.68■■□□□ 1.38
SFMBT1-202ENST00000470575 DDX60Q8IY21 1712 aaKnown RBP23.67■■□□□ 1.38
SFMBT1-202ENST00000470575 COL4A1P02462 1669 aa23.67■■□□□ 1.38
SFMBT1-202ENST00000470575 DUOX1Q9NRD9 1551 aa23.66■■□□□ 1.38
SFMBT1-202ENST00000470575 DPP8Q6V1X1 898 aaPredicted RBP23.66■■□□□ 1.38
SFMBT1-202ENST00000470575 ABT1Q9ULW3 272 aaKnown RBP23.66■■□□□ 1.38
SFMBT1-202ENST00000470575 ATP5J2-PTCD1G3V325 749 aa23.65■■□□□ 1.38
SFMBT1-202ENST00000470575 GRAPQ13588 217 aa23.65■■□□□ 1.38
SFMBT1-202ENST00000470575 DDX46Q7L014 1031 aaKnown RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms