RNA–Protein interactions for RNA: ENST00000468948.1

ITGA4-205, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 393 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-205ENST00000468948 PRR20BP86481 221 aa11.86□□□□□ -0.51
ITGA4-205ENST00000468948 PRR20AP86496 221 aa11.86□□□□□ -0.51
ITGA4-205ENST00000468948 BMP2P12643 396 aa11.85□□□□□ -0.51
ITGA4-205ENST00000468948 NAALADL2Q58DX5 795 aa11.85□□□□□ -0.51
ITGA4-205ENST00000468948 TRIM67Q6ZTA4 783 aa11.85□□□□□ -0.51
ITGA4-205ENST00000468948 FRMD6Q96NE9 622 aa11.85□□□□□ -0.51
ITGA4-205ENST00000468948 USP20Q9Y2K6 914 aa11.85□□□□□ -0.51
ITGA4-205ENST00000468948 CPNE3O75131 537 aaKnown RBP11.84□□□□□ -0.51
ITGA4-205ENST00000468948 ARSDP51689 593 aa11.84□□□□□ -0.51
ITGA4-205ENST00000468948 SREK1Q8WXA9 508 aaKnown RBP11.84□□□□□ -0.51
ITGA4-205ENST00000468948 DRC1Q96MC2 740 aa11.84□□□□□ -0.51
ITGA4-205ENST00000468948 FNDC3AQ9Y2H6 1198 aaKnown RBP11.84□□□□□ -0.51
ITGA4-205ENST00000468948 ARSJQ5FYB0 599 aaPredicted RBP11.83□□□□□ -0.52
ITGA4-205ENST00000468948 WDR44Q5JSH3 913 aa11.83□□□□□ -0.52
ITGA4-205ENST00000468948 C6orf118Q5T5N4 469 aa11.83□□□□□ -0.52
ITGA4-205ENST00000468948 LYSMD3Q7Z3D4 306 aa11.83□□□□□ -0.52
ITGA4-205ENST00000468948 CMTR1Q8N1G2 835 aaKnown RBP11.83□□□□□ -0.52
ITGA4-205ENST00000468948 RNF217Q8TC41 542 aa11.83□□□□□ -0.52
ITGA4-205ENST00000468948 RNF34Q969K3 372 aa11.83□□□□□ -0.52
ITGA4-205ENST00000468948 ZIC5Q96T25 663 aa11.83□□□□□ -0.52
ITGA4-205ENST00000468948 AK5Q9Y6K8 562 aa11.83□□□□□ -0.52
ITGA4-205ENST00000468948 ATP4AP20648 1035 aa11.82□□□□□ -0.52
ITGA4-205ENST00000468948 INPP5BP32019 993 aa11.82□□□□□ -0.52
ITGA4-205ENST00000468948 LRRC69Q6ZNQ3 347 aa11.82□□□□□ -0.52
ITGA4-205ENST00000468948 BTLAQ7Z6A9 289 aa11.82□□□□□ -0.52
ITGA4-205ENST00000468948 METTL5Q9NRN9 209 aaKnown RBP11.82□□□□□ -0.52
ITGA4-205ENST00000468948 SPG7Q9UQ90 795 aa11.82□□□□□ -0.52
ITGA4-205ENST00000468948 RTCBQ9Y3I0 505 aaKnown RBP11.82□□□□□ -0.52
ITGA4-205ENST00000468948 FANCCQ00597 558 aa11.81□□□□□ -0.52
ITGA4-205ENST00000468948 XKR5Q6UX68 686 aa11.81□□□□□ -0.52
ITGA4-205ENST00000468948 ZNF438Q7Z4V0 828 aa11.81□□□□□ -0.52
ITGA4-205ENST00000468948 METTL16Q86W50 562 aaKnown RBP11.81□□□□□ -0.52
ITGA4-205ENST00000468948 NT5DC4Q86YG4 428 aa11.81□□□□□ -0.52
ITGA4-205ENST00000468948 TIMMDC1Q9NPL8 285 aa11.81□□□□□ -0.52
ITGA4-205ENST00000468948 FOXD3Q9UJU5 478 aaPredicted RBP11.81□□□□□ -0.52
ITGA4-205ENST00000468948 UBAP1LF5GYI3 381 aa11.8□□□□□ -0.52
ITGA4-205ENST00000468948 TNFRSF21O75509 655 aa11.8□□□□□ -0.52
ITGA4-205ENST00000468948 MSX1P28360 303 aa11.8□□□□□ -0.52
ITGA4-205ENST00000468948 ZNF76P36508 570 aa11.8□□□□□ -0.52
ITGA4-205ENST00000468948 A0A1B0GTH6 734 aa11.79□□□□□ -0.52
ITGA4-205ENST00000468948 RHOQP17081 205 aa11.79□□□□□ -0.52
ITGA4-205ENST00000468948 RAD51AP2Q09MP3 1159 aa11.79□□□□□ -0.52
ITGA4-205ENST00000468948 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.79□□□□□ -0.52
ITGA4-205ENST00000468948 EIF4BP23588 611 aaKnown RBP11.78□□□□□ -0.52
ITGA4-205ENST00000468948 TRIP4Q15650 581 aaPredicted RBP11.78□□□□□ -0.52
ITGA4-205ENST00000468948 USPL1Q5W0Q7 1092 aa11.78□□□□□ -0.52
ITGA4-205ENST00000468948 PDE12Q6L8Q7 609 aaKnown RBP11.78□□□□□ -0.52
ITGA4-205ENST00000468948 MRPL14Q6P1L8 145 aaKnown RBP11.78□□□□□ -0.52
ITGA4-205ENST00000468948 SNX29Q8TEQ0 813 aa11.78□□□□□ -0.52
ITGA4-205ENST00000468948 CCDC74AQ96AQ1 378 aa11.78□□□□□ -0.52
ITGA4-205ENST00000468948 KCNMB2Q9Y691 235 aa11.78□□□□□ -0.52
ITGA4-205ENST00000468948 A0A1W2PNR3 127 aa11.77□□□□□ -0.53
ITGA4-205ENST00000468948 CRELD1Q96HD1 420 aa11.77□□□□□ -0.53
ITGA4-205ENST00000468948 ELP3Q9H9T3 547 aa11.77□□□□□ -0.53
ITGA4-205ENST00000468948 ZFYVE28Q9HCC9 887 aa11.77□□□□□ -0.53
ITGA4-205ENST00000468948 GJA3Q9Y6H8 435 aa11.77□□□□□ -0.53
ITGA4-205ENST00000468948 CTSHP09668 335 aa11.76□□□□□ -0.53
ITGA4-205ENST00000468948 FIGNL2A6NMB9 653 aa11.75□□□□□ -0.53
ITGA4-205ENST00000468948 TTLL8A6PVC2 850 aa11.75□□□□□ -0.53
ITGA4-205ENST00000468948 PHACTR2O75167 634 aa11.75□□□□□ -0.53
ITGA4-205ENST00000468948 EPB42P16452 691 aa11.75□□□□□ -0.53
ITGA4-205ENST00000468948 SF3A1Q15459 793 aaKnown RBP11.75□□□□□ -0.53
ITGA4-205ENST00000468948 EPS8L3Q8TE67 593 aaKnown RBP11.75□□□□□ -0.53
ITGA4-205ENST00000468948 CEP63Q96MT8 703 aa11.75□□□□□ -0.53
ITGA4-205ENST00000468948 TGIF2Q9GZN2 237 aa11.75□□□□□ -0.53
ITGA4-205ENST00000468948 NLRP2Q9NX02 1062 aa11.75□□□□□ -0.53
ITGA4-205ENST00000468948 PPP1R1BQ9UD71 204 aaPredicted RBP11.75□□□□□ -0.53
ITGA4-205ENST00000468948 GIPC1O14908 333 aa11.74□□□□□ -0.53
ITGA4-205ENST00000468948 IRS1P35568 1242 aa11.74□□□□□ -0.53
ITGA4-205ENST00000468948 SCARF1Q14162 830 aa11.74□□□□□ -0.53
ITGA4-205ENST00000468948 PI16Q6UXB8 463 aa11.74□□□□□ -0.53
ITGA4-205ENST00000468948 TMEM63CQ9P1W3 806 aa11.74□□□□□ -0.53
ITGA4-205ENST00000468948 TYRO3Q06418 890 aa11.73□□□□□ -0.53
ITGA4-205ENST00000468948 OSBPL7Q9BZF2 842 aa11.73□□□□□ -0.53
ITGA4-205ENST00000468948 C12orf49Q9H741 205 aa11.73□□□□□ -0.53
ITGA4-205ENST00000468948 CCSER2Q9H7U1 834 aa11.73□□□□□ -0.53
ITGA4-205ENST00000468948 GPAMQ9HCL2 828 aa11.72□□□□□ -0.53
ITGA4-205ENST00000468948 XYLBO75191 536 aa11.71□□□□□ -0.53
ITGA4-205ENST00000468948 POLR3DP05423 398 aaPredicted RBP11.71□□□□□ -0.53
ITGA4-205ENST00000468948 GRNP28799 593 aaKnown RBP11.71□□□□□ -0.53
ITGA4-205ENST00000468948 RUBCNLQ9H714 662 aa11.71□□□□□ -0.53
ITGA4-205ENST00000468948 SOS2Q07890 1332 aaPredicted RBP11.7□□□□□ -0.54
ITGA4-205ENST00000468948 PGBD3Q8N328 593 aa11.7□□□□□ -0.54
ITGA4-205ENST00000468948 CRISPLD1Q9H336 500 aa11.7□□□□□ -0.54
ITGA4-205ENST00000468948 CAPN10Q9HC96 672 aa11.7□□□□□ -0.54
ITGA4-205ENST00000468948 UBXN4Q92575 508 aa11.69□□□□□ -0.54
ITGA4-205ENST00000468948 NPHS2Q9NP85 383 aa11.69□□□□□ -0.54
ITGA4-205ENST00000468948 PDZRN3Q9UPQ7 1066 aa11.69□□□□□ -0.54
ITGA4-205ENST00000468948 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.69□□□□□ -0.54
ITGA4-205ENST00000468948 F11P03951 625 aa11.68□□□□□ -0.54
ITGA4-205ENST00000468948 BMP1P13497 986 aa11.68□□□□□ -0.54
ITGA4-205ENST00000468948 NLRP13Q86W25 1043 aa11.68□□□□□ -0.54
ITGA4-205ENST00000468948 C1orf127Q8N9H9 656 aa11.68□□□□□ -0.54
ITGA4-205ENST00000468948 GAS2L1Q99501 681 aaPredicted RBP11.68□□□□□ -0.54
ITGA4-205ENST00000468948 CHRDQ9H2X0 955 aa11.68□□□□□ -0.54
ITGA4-205ENST00000468948 ACBD3Q9H3P7 528 aa11.68□□□□□ -0.54
ITGA4-205ENST00000468948 BRD7Q9NPI1 651 aa11.68□□□□□ -0.54
ITGA4-205ENST00000468948 CNTN3Q9P232 1028 aa11.68□□□□□ -0.54
ITGA4-205ENST00000468948 DYRK1BQ9Y463 629 aa11.68□□□□□ -0.54
ITGA4-205ENST00000468948 USP31Q70CQ4 1352 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms