RNA–Protein interactions for RNA: ENST00000468948.1

ITGA4-205, Transcript of integrin subunit alpha 4, humanhuman

TSL 3

Gene ITGA4, Length 393 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-205ENST00000468948 CHIC1Q5VXU3 224 aa29.96■■■□□ 2.39
ITGA4-205ENST00000468948 AEBP2Q6ZN18 517 aaPredicted RBP29.78■■■□□ 2.36
ITGA4-205ENST00000468948 PHF23Q9BUL5 403 aaPredicted RBP26.46■■□□□ 1.83
ITGA4-205ENST00000468948 SENP3Q9H4L4 574 aaPredicted RBP25.11■■□□□ 1.61
ITGA4-205ENST00000468948 PLPPR3Q6T4P5 718 aa24.75■■□□□ 1.55
ITGA4-205ENST00000468948 FOXD1Q16676 465 aa23.21■■□□□ 1.31
ITGA4-205ENST00000468948 ADRA2BP18089 450 aa23.18■■□□□ 1.3
ITGA4-205ENST00000468948 PPP6R1Q9UPN7 881 aa23.06■■□□□ 1.28
ITGA4-205ENST00000468948 KCNA4P22459 653 aa22.46■■□□□ 1.19
ITGA4-205ENST00000468948 PIAS4Q8N2W9 510 aaPredicted RBP22.12■■□□□ 1.13
ITGA4-205ENST00000468948 EHMT2Q96KQ7 1210 aa22.03■■□□□ 1.12
ITGA4-205ENST00000468948 PPP4R3CPQ6ZMV5 832 aa21.94■■□□□ 1.1
ITGA4-205ENST00000468948 NCBP3Q53F19 620 aaKnown RBP21.63■■□□□ 1.05
ITGA4-205ENST00000468948 SLC4A1APQ9BWU0 796 aaKnown RBP21.57■■□□□ 1.04
ITGA4-205ENST00000468948 CSRNP3Q8WYN3 585 aa21.32■■□□□ 1
ITGA4-205ENST00000468948 NPM3O75607 178 aaKnown RBP21.3■■□□□ 1
ITGA4-205ENST00000468948 SCAF1Q9H7N4 1312 aaKnown RBP21.13■□□□□ 0.97
ITGA4-205ENST00000468948 CNKSR2Q8WXI2 1034 aa21.11■□□□□ 0.97
ITGA4-205ENST00000468948 MSH5O43196 834 aa21.03■□□□□ 0.96
ITGA4-205ENST00000468948 MAPK8IP2Q13387 824 aaPredicted RBP20.7■□□□□ 0.9
ITGA4-205ENST00000468948 ZBTB22O15209 634 aa20.68■□□□□ 0.9
ITGA4-205ENST00000468948 DNAJC5BQ9UF47 199 aa20.48■□□□□ 0.87
ITGA4-205ENST00000468948 RNF216Q9NWF9 866 aaPredicted RBP20.46■□□□□ 0.87
ITGA4-205ENST00000468948 FOXD4L1Q9NU39 408 aa20.4■□□□□ 0.86
ITGA4-205ENST00000468948 DMRT2Q9Y5R5 561 aa20.19■□□□□ 0.82
ITGA4-205ENST00000468948 HOXD11P31277 338 aaPredicted RBP20.13■□□□□ 0.81
ITGA4-205ENST00000468948 SLC4A2P04920 1241 aa19.89■□□□□ 0.77
ITGA4-205ENST00000468948 MYCNP04198 464 aaPredicted RBP19.66■□□□□ 0.74
ITGA4-205ENST00000468948 ATXN8OSP0DMR3 200 aa19.6■□□□□ 0.73
ITGA4-205ENST00000468948 DCAF8L1A6NGE4 600 aa19.34■□□□□ 0.69
ITGA4-205ENST00000468948 FKBP8Q14318 412 aa19.24■□□□□ 0.67
ITGA4-205ENST00000468948 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.23■□□□□ 0.67
ITGA4-205ENST00000468948 AMER1Q5JTC6 1135 aaPredicted RBP19.12■□□□□ 0.65
ITGA4-205ENST00000468948 RTN4Q9NQC3 1192 aaKnown RBP19.11■□□□□ 0.65
ITGA4-205ENST00000468948 ATF5Q9Y2D1 282 aaPredicted RBP19.09■□□□□ 0.65
ITGA4-205ENST00000468948 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.05■□□□□ 0.64
ITGA4-205ENST00000468948 HNRNPUL2Q1KMD3 747 aaKnown RBP19.05■□□□□ 0.64
ITGA4-205ENST00000468948 SAMD1Q6SPF0 538 aaPredicted RBP19.03■□□□□ 0.64
ITGA4-205ENST00000468948 U3KPZ7 1027 aaPredicted RBP18.99■□□□□ 0.63
ITGA4-205ENST00000468948 SLC24A1O60721 1099 aa18.76■□□□□ 0.59
ITGA4-205ENST00000468948 ZNF219Q9P2Y4 722 aaPredicted RBP18.68■□□□□ 0.58
ITGA4-205ENST00000468948 APLP2Q06481 763 aa18.65■□□□□ 0.58
ITGA4-205ENST00000468948 SPDYE4A6NLX3 237 aa18.34■□□□□ 0.53
ITGA4-205ENST00000468948 MKRN4PQ13434 485 aaPredicted RBP18.29■□□□□ 0.52
ITGA4-205ENST00000468948 FBXO3Q9UK99 471 aa18.29■□□□□ 0.52
ITGA4-205ENST00000468948 TRHP20396 242 aaPredicted RBP18.25■□□□□ 0.51
ITGA4-205ENST00000468948 FBLN2P98095 1184 aa18.23■□□□□ 0.51
ITGA4-205ENST00000468948 SPINK5Q9NQ38 1064 aaPredicted RBP18.21■□□□□ 0.51
ITGA4-205ENST00000468948 POLA2Q14181 598 aa18.15■□□□□ 0.5
ITGA4-205ENST00000468948 CAPN15O75808 1086 aa18.11■□□□□ 0.49
ITGA4-205ENST00000468948 PROM2Q8N271 834 aa18.11■□□□□ 0.49
ITGA4-205ENST00000468948 RNF39Q9H2S5 420 aa18.1■□□□□ 0.49
ITGA4-205ENST00000468948 VASPP50552 380 aaPredicted RBP18.01■□□□□ 0.47
ITGA4-205ENST00000468948 C1QBPQ07021 282 aaKnown RBP17.94■□□□□ 0.46
ITGA4-205ENST00000468948 ZBTB12Q9Y330 459 aaPredicted RBP17.88■□□□□ 0.45
ITGA4-205ENST00000468948 ABCB7O75027 752 aa17.86■□□□□ 0.45
ITGA4-205ENST00000468948 IFNLR1Q8IU57 520 aaPredicted RBP17.84■□□□□ 0.45
ITGA4-205ENST00000468948 POTEDQ86YR6 584 aa17.66■□□□□ 0.42
ITGA4-205ENST00000468948 DCAF8L2P0C7V8 631 aa17.65■□□□□ 0.42
ITGA4-205ENST00000468948 PLCB2Q00722 1185 aa17.63■□□□□ 0.41
ITGA4-205ENST00000468948 PKD2Q13563 968 aa17.59■□□□□ 0.41
ITGA4-205ENST00000468948 ZNF692Q9BU19 519 aaPredicted RBP17.59■□□□□ 0.41
ITGA4-205ENST00000468948 DSG3P32926 999 aa17.55■□□□□ 0.4
ITGA4-205ENST00000468948 KLHL34Q8N239 644 aa17.54■□□□□ 0.4
ITGA4-205ENST00000468948 SPOCK2Q92563 424 aa17.49■□□□□ 0.39
ITGA4-205ENST00000468948 STAG3Q9UJ98 1225 aa17.49■□□□□ 0.39
ITGA4-205ENST00000468948 SPDYE2BA6NHP3 402 aa17.48■□□□□ 0.39
ITGA4-205ENST00000468948 SPDYE6P0CI01 402 aa17.48■□□□□ 0.39
ITGA4-205ENST00000468948 SPDYE2Q495Y8 402 aa17.48■□□□□ 0.39
ITGA4-205ENST00000468948 OSCARQ8IYS5 282 aa17.48■□□□□ 0.39
ITGA4-205ENST00000468948 HAP1P54257 671 aaPredicted RBP17.43■□□□□ 0.38
ITGA4-205ENST00000468948 SSUH2Q9Y2M2 353 aa17.43■□□□□ 0.38
ITGA4-205ENST00000468948 PLCD3Q8N3E9 789 aa17.39■□□□□ 0.37
ITGA4-205ENST00000468948 PABPN1Q86U42 306 aaKnown RBP eCLIP17.38■□□□□ 0.37
ITGA4-205ENST00000468948 ECM2O94769 699 aaPredicted RBP17.34■□□□□ 0.37
ITGA4-205ENST00000468948 MIER1Q8N108 512 aa17.32■□□□□ 0.36
ITGA4-205ENST00000468948 BBXQ8WY36 941 aaPredicted RBP17.2■□□□□ 0.34
ITGA4-205ENST00000468948 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.2■□□□□ 0.34
ITGA4-205ENST00000468948 VSIG10Q8N0Z9 540 aa17.16■□□□□ 0.34
ITGA4-205ENST00000468948 NPM1P06748 294 aaKnown RBP eCLIP17.15■□□□□ 0.34
ITGA4-205ENST00000468948 PLEKHG5O94827 1062 aa17.14■□□□□ 0.33
ITGA4-205ENST00000468948 RGL2O15211 777 aa17.13■□□□□ 0.33
ITGA4-205ENST00000468948 ZBTB47Q9UFB7 747 aaPredicted RBP17.1■□□□□ 0.33
ITGA4-205ENST00000468948 CIZ1Q9ULV3 898 aaPredicted RBP17.09■□□□□ 0.33
ITGA4-205ENST00000468948 PAXIP1Q6ZW49 1069 aaPredicted RBP17.08■□□□□ 0.32
ITGA4-205ENST00000468948 CFAP44Q96MT7 982 aa17.05■□□□□ 0.32
ITGA4-205ENST00000468948 BCANQ96GW7 911 aa17.04■□□□□ 0.32
ITGA4-205ENST00000468948 CACNB1Q02641 598 aaPredicted RBP17.01■□□□□ 0.31
ITGA4-205ENST00000468948 SPRYD3Q8NCJ5 442 aa16.94■□□□□ 0.3
ITGA4-205ENST00000468948 CHGAP10645 457 aaKnown RBP16.92■□□□□ 0.3
ITGA4-205ENST00000468948 KDM2AQ9Y2K7 1162 aa16.92■□□□□ 0.3
ITGA4-205ENST00000468948 TRIM41Q8WV44 630 aa16.91■□□□□ 0.3
ITGA4-205ENST00000468948 GSE1Q14687 1217 aa16.81■□□□□ 0.28
ITGA4-205ENST00000468948 TSHZ2Q9NRE2 1034 aa16.8■□□□□ 0.28
ITGA4-205ENST00000468948 SPDYE1Q8NFV5 336 aaPredicted RBP16.76■□□□□ 0.27
ITGA4-205ENST00000468948 TAOK2Q9UL54 1235 aa16.76■□□□□ 0.27
ITGA4-205ENST00000468948 PRKCSHP14314 528 aaPredicted RBP16.74■□□□□ 0.27
ITGA4-205ENST00000468948 NUBP1P53384 320 aa16.74■□□□□ 0.27
ITGA4-205ENST00000468948 HS6ST3Q8IZP7 471 aa16.74■□□□□ 0.27
ITGA4-205ENST00000468948 DCAF8Q5TAQ9 597 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms