RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 EIF2S2P20042 333 aaKnown RBP22.7■■□□□ 1.22
CYTH3-205ENST00000466543 TMPOP42166 694 aaKnown RBP22.7■■□□□ 1.22
CYTH3-205ENST00000466543 ERBB4Q15303 1308 aa22.7■■□□□ 1.22
CYTH3-205ENST00000466543 PASKQ96RG2 1323 aa22.69■■□□□ 1.22
CYTH3-205ENST00000466543 IQCA1LA6NCM1 817 aa22.69■■□□□ 1.22
CYTH3-205ENST00000466543 PSMD1Q99460 953 aa22.69■■□□□ 1.22
CYTH3-205ENST00000466543 LTBP1Q14766 1721 aa22.68■■□□□ 1.22
CYTH3-205ENST00000466543 HSPA1AP0DMV8 641 aaKnown RBP22.68■■□□□ 1.22
CYTH3-205ENST00000466543 HSPA1BP0DMV9 641 aaKnown RBP22.68■■□□□ 1.22
CYTH3-205ENST00000466543 RALBP1Q15311 655 aa22.68■■□□□ 1.22
CYTH3-205ENST00000466543 KRT24Q2M2I5 525 aa22.68■■□□□ 1.22
CYTH3-205ENST00000466543 LDHDQ86WU2 507 aa22.68■■□□□ 1.22
CYTH3-205ENST00000466543 CREBZFQ9NS37 354 aa22.68■■□□□ 1.22
CYTH3-205ENST00000466543 MKRN1Q9UHC7 482 aaKnown RBP22.68■■□□□ 1.22
CYTH3-205ENST00000466543 RNF123Q5XPI4 1314 aa22.67■■□□□ 1.22
CYTH3-205ENST00000466543 CCDC146Q8IYE0 955 aa22.67■■□□□ 1.22
CYTH3-205ENST00000466543 RPGRQ92834 1020 aaKnown RBP22.67■■□□□ 1.22
CYTH3-205ENST00000466543 ANKRD36CQ5JPF3 1778 aa22.67■■□□□ 1.22
CYTH3-205ENST00000466543 LAMB2P55268 1798 aa22.66■■□□□ 1.22
CYTH3-205ENST00000466543 TCERG1O14776 1098 aaKnown RBP22.66■■□□□ 1.22
CYTH3-205ENST00000466543 ITGBL1O95965 494 aaPredicted RBP22.66■■□□□ 1.22
CYTH3-205ENST00000466543 DDX10Q13206 875 aaKnown RBP22.66■■□□□ 1.22
CYTH3-205ENST00000466543 EAPPQ56P03 285 aaPredicted RBP22.66■■□□□ 1.22
CYTH3-205ENST00000466543 NECTIN2Q92692 538 aa22.66■■□□□ 1.22
CYTH3-205ENST00000466543 HACL1Q9UJ83 578 aa22.66■■□□□ 1.22
CYTH3-205ENST00000466543 EPHX2P34913 555 aa22.65■■□□□ 1.22
CYTH3-205ENST00000466543 CRAMP1Q96RY5 1269 aa22.65■■□□□ 1.22
CYTH3-205ENST00000466543 BABAM1Q9NWV8 329 aa22.64■■□□□ 1.21
CYTH3-205ENST00000466543 PPEF1O14829 653 aaPredicted RBP22.63■■□□□ 1.21
CYTH3-205ENST00000466543 NEUROD2Q15784 382 aa22.63■■□□□ 1.21
CYTH3-205ENST00000466543 PARP10Q53GL7 1025 aa22.63■■□□□ 1.21
CYTH3-205ENST00000466543 CC2D2BQ6DHV5 1058 aa22.63■■□□□ 1.21
CYTH3-205ENST00000466543 GPC2Q8N158 579 aa22.63■■□□□ 1.21
CYTH3-205ENST00000466543 TRIM35Q9UPQ4 493 aa22.63■■□□□ 1.21
CYTH3-205ENST00000466543 MYBBP1AQ9BQG0 1328 aaKnown RBP22.62■■□□□ 1.21
CYTH3-205ENST00000466543 SLC10A5Q5PT55 438 aa22.62■■□□□ 1.21
CYTH3-205ENST00000466543 COPS6Q7L5N1 327 aa22.62■■□□□ 1.21
CYTH3-205ENST00000466543 PPP1R42Q7Z4L9 355 aa22.62■■□□□ 1.21
CYTH3-205ENST00000466543 XAGE3Q8WTP9 111 aa22.62■■□□□ 1.21
CYTH3-205ENST00000466543 RBM17Q96I25 401 aaKnown RBP22.62■■□□□ 1.21
CYTH3-205ENST00000466543 CNTNAP1P78357 1384 aa22.62■■□□□ 1.21
CYTH3-205ENST00000466543 CHL1O00533 1208 aa22.61■■□□□ 1.21
CYTH3-205ENST00000466543 TAF1P21675 1872 aa22.61■■□□□ 1.21
CYTH3-205ENST00000466543 AIMP1Q12904 312 aaKnown RBP22.61■■□□□ 1.21
CYTH3-205ENST00000466543 JDP2Q8WYK2 163 aa22.61■■□□□ 1.21
CYTH3-205ENST00000466543 UTP14AQ9BVJ6 771 aaKnown RBP22.61■■□□□ 1.21
CYTH3-205ENST00000466543 LMOD3Q0VAK6 560 aa22.6■■□□□ 1.21
CYTH3-205ENST00000466543 MAP1SQ66K74 1059 aaPredicted RBP22.6■■□□□ 1.21
CYTH3-205ENST00000466543 NLRP10Q86W26 655 aa22.6■■□□□ 1.21
CYTH3-205ENST00000466543 ZNF428Q96B54 188 aa22.6■■□□□ 1.21
CYTH3-205ENST00000466543 NLRP3Q96P20 1036 aa22.6■■□□□ 1.21
CYTH3-205ENST00000466543 CLEC11AQ9Y240 323 aa22.6■■□□□ 1.21
CYTH3-205ENST00000466543 GJA3Q9Y6H8 435 aa22.6■■□□□ 1.21
CYTH3-205ENST00000466543 ABCC4O15439 1325 aa22.59■■□□□ 1.21
CYTH3-205ENST00000466543 LARGE2Q8N3Y3 721 aa22.59■■□□□ 1.21
CYTH3-205ENST00000466543 HCLS1P14317 486 aaPredicted RBP22.58■■□□□ 1.21
CYTH3-205ENST00000466543 SCNN1DP51172 638 aa22.58■■□□□ 1.21
CYTH3-205ENST00000466543 TNS4Q8IZW8 715 aa22.58■■□□□ 1.21
CYTH3-205ENST00000466543 ATP6V0A2Q9Y487 856 aa22.58■■□□□ 1.21
CYTH3-205ENST00000466543 EPS15P42566 896 aa22.57■■□□□ 1.2
CYTH3-205ENST00000466543 EIF6P56537 245 aaKnown RBP22.57■■□□□ 1.2
CYTH3-205ENST00000466543 CNTROBQ8N137 903 aa22.57■■□□□ 1.2
CYTH3-205ENST00000466543 RUNDC1Q96C34 613 aa22.57■■□□□ 1.2
CYTH3-205ENST00000466543 DDX21Q9NR30 783 aaKnown RBP eCLIP22.57■■□□□ 1.2
CYTH3-205ENST00000466543 CHPF2Q9P2E5 772 aa22.57■■□□□ 1.2
CYTH3-205ENST00000466543 LAS1LQ9Y4W2 734 aaKnown RBP22.57■■□□□ 1.2
CYTH3-205ENST00000466543 TMEM88BA6NKF7 163 aa22.56■■□□□ 1.2
CYTH3-205ENST00000466543 FMR1Q06787 632 aaKnown RBP eCLIP22.56■■□□□ 1.2
CYTH3-205ENST00000466543 AOC3Q16853 763 aa22.56■■□□□ 1.2
CYTH3-205ENST00000466543 PNMA8AQ86V59 439 aaPredicted RBP22.56■■□□□ 1.2
CYTH3-205ENST00000466543 ADAMTS8Q9UP79 889 aa22.56■■□□□ 1.2
CYTH3-205ENST00000466543 DDX60Q8IY21 1712 aaKnown RBP22.56■■□□□ 1.2
CYTH3-205ENST00000466543 VEGFBP49765 207 aa22.55■■□□□ 1.2
CYTH3-205ENST00000466543 TCIRG1Q13488 830 aa22.55■■□□□ 1.2
CYTH3-205ENST00000466543 GRIPAP1Q4V328 841 aa22.55■■□□□ 1.2
CYTH3-205ENST00000466543 COL4A1P02462 1669 aa22.55■■□□□ 1.2
CYTH3-205ENST00000466543 PPIP5K2O43314 1243 aa22.54■■□□□ 1.2
CYTH3-205ENST00000466543 CAPN15O75808 1086 aa22.54■■□□□ 1.2
CYTH3-205ENST00000466543 HSP90AB3PQ58FF7 597 aa22.53■■□□□ 1.2
CYTH3-205ENST00000466543 NIM1KQ8IY84 436 aa22.53■■□□□ 1.2
CYTH3-205ENST00000466543 DUOX1Q9NRD9 1551 aa22.53■■□□□ 1.2
CYTH3-205ENST00000466543 FOXN1O15353 648 aa22.52■■□□□ 1.2
CYTH3-205ENST00000466543 RTFDC1Q9BY42 306 aaPredicted RBP22.52■■□□□ 1.2
CYTH3-205ENST00000466543 TRMT112Q9UI30 125 aaKnown RBP22.52■■□□□ 1.2
CYTH3-205ENST00000466543 WDR43Q15061 677 aaKnown RBP eCLIP22.51■■□□□ 1.19
CYTH3-205ENST00000466543 SH3TC1Q8TE82 1336 aa22.51■■□□□ 1.19
CYTH3-205ENST00000466543 LRRC37AA6NMS7 1700 aa22.51■■□□□ 1.19
CYTH3-205ENST00000466543 LMOD1P29536 600 aaPredicted RBP22.5■■□□□ 1.19
CYTH3-205ENST00000466543 CXCL9Q07325 125 aa22.5■■□□□ 1.19
CYTH3-205ENST00000466543 HDGFL1Q5TGJ6 251 aa22.5■■□□□ 1.19
CYTH3-205ENST00000466543 SP8Q8IXZ3 490 aa22.5■■□□□ 1.19
CYTH3-205ENST00000466543 RASSF10A6NK89 507 aa22.49■■□□□ 1.19
CYTH3-205ENST00000466543 BBOX1O75936 387 aa22.49■■□□□ 1.19
CYTH3-205ENST00000466543 PLBD2Q8NHP8 589 aa22.49■■□□□ 1.19
CYTH3-205ENST00000466543 ISCA1Q9BUE6 129 aa22.49■■□□□ 1.19
CYTH3-205ENST00000466543 ATP5J2-PTCD1G3V325 749 aa22.48■■□□□ 1.19
CYTH3-205ENST00000466543 TRAF5O00463 557 aa22.48■■□□□ 1.19
CYTH3-205ENST00000466543 GRAPQ13588 217 aa22.48■■□□□ 1.19
CYTH3-205ENST00000466543 DPP8Q6V1X1 898 aaPredicted RBP22.48■■□□□ 1.19
CYTH3-205ENST00000466543 MPNDQ8N594 471 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms