RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 PPP1R42Q7Z4L9 355 aa29.9■■■□□ 2.38
USP42-205ENST00000465073 CREBZFQ9NS37 354 aa29.9■■■□□ 2.38
USP42-205ENST00000465073 FZD9O00144 591 aa29.89■■■□□ 2.38
USP42-205ENST00000465073 NTSR2O95665 410 aa29.89■■■□□ 2.38
USP42-205ENST00000465073 LRP10Q7Z4F1 713 aa29.89■■■□□ 2.38
USP42-205ENST00000465073 CRAMP1Q96RY5 1269 aa29.89■■■□□ 2.38
USP42-205ENST00000465073 RBM17Q96I25 401 aaKnown RBP29.88■■■□□ 2.37
USP42-205ENST00000465073 SNED1Q8TER0 1413 aa29.88■■■□□ 2.37
USP42-205ENST00000465073 JDP2Q8WYK2 163 aa29.87■■■□□ 2.37
USP42-205ENST00000465073 HACL1Q9UJ83 578 aa29.87■■■□□ 2.37
USP42-205ENST00000465073 SCN4AP35499 1836 aa29.87■■■□□ 2.37
USP42-205ENST00000465073 COL13A1Q5TAT6 717 aaPredicted RBP29.86■■■□□ 2.37
USP42-205ENST00000465073 MYBBP1AQ9BQG0 1328 aaKnown RBP29.85■■■□□ 2.37
USP42-205ENST00000465073 GPC2Q8N158 579 aa29.85■■■□□ 2.37
USP42-205ENST00000465073 PCNTO95613 3336 aa29.84■■■□□ 2.37
USP42-205ENST00000465073 DDX10Q13206 875 aaKnown RBP29.84■■■□□ 2.37
USP42-205ENST00000465073 PROSER3Q2NL68 480 aa29.84■■■□□ 2.37
USP42-205ENST00000465073 NLRP3Q96P20 1036 aa29.84■■■□□ 2.37
USP42-205ENST00000465073 UTP14AQ9BVJ6 771 aaKnown RBP29.84■■■□□ 2.37
USP42-205ENST00000465073 EPHX2P34913 555 aa29.83■■■□□ 2.37
USP42-205ENST00000465073 EAPPQ56P03 285 aaPredicted RBP29.83■■■□□ 2.37
USP42-205ENST00000465073 SLC10A5Q5PT55 438 aa29.83■■■□□ 2.37
USP42-205ENST00000465073 PASKQ96RG2 1323 aa29.83■■■□□ 2.37
USP42-205ENST00000465073 PPEF1O14829 653 aaPredicted RBP29.82■■■□□ 2.36
USP42-205ENST00000465073 PNMA8AQ86V59 439 aaPredicted RBP29.82■■■□□ 2.36
USP42-205ENST00000465073 ANXA1P04083 346 aa29.81■■■□□ 2.36
USP42-205ENST00000465073 HSPA1AP0DMV8 641 aaKnown RBP29.81■■■□□ 2.36
USP42-205ENST00000465073 HSPA1BP0DMV9 641 aaKnown RBP29.81■■■□□ 2.36
USP42-205ENST00000465073 EIF6P56537 245 aaKnown RBP29.81■■■□□ 2.36
USP42-205ENST00000465073 C3orf67Q6ZVT6 689 aa29.81■■■□□ 2.36
USP42-205ENST00000465073 NEUROD2Q15784 382 aa29.8■■■□□ 2.36
USP42-205ENST00000465073 HSP90AB3PQ58FF7 597 aa29.8■■■□□ 2.36
USP42-205ENST00000465073 CLEC11AQ9Y240 323 aa29.8■■■□□ 2.36
USP42-205ENST00000465073 RNF123Q5XPI4 1314 aa29.8■■■□□ 2.36
USP42-205ENST00000465073 CHL1O00533 1208 aa29.8■■■□□ 2.36
USP42-205ENST00000465073 ITGBL1O95965 494 aaPredicted RBP29.8■■■□□ 2.36
USP42-205ENST00000465073 COPS6Q7L5N1 327 aa29.8■■■□□ 2.36
USP42-205ENST00000465073 CCDC146Q8IYE0 955 aa29.8■■■□□ 2.36
USP42-205ENST00000465073 TMX4Q9H1E5 349 aaPredicted RBP29.8■■■□□ 2.36
USP42-205ENST00000465073 MKRN1Q9UHC7 482 aaKnown RBP29.8■■■□□ 2.36
USP42-205ENST00000465073 LARGE2Q8N3Y3 721 aa29.79■■■□□ 2.36
USP42-205ENST00000465073 NECTIN2Q92692 538 aa29.79■■■□□ 2.36
USP42-205ENST00000465073 RUNDC1Q96C34 613 aa29.79■■■□□ 2.36
USP42-205ENST00000465073 WDR43Q15061 677 aaKnown RBP eCLIP29.78■■■□□ 2.36
USP42-205ENST00000465073 XAGE3Q8WTP9 111 aa29.78■■■□□ 2.36
USP42-205ENST00000465073 DDX21Q9NR30 783 aaKnown RBP eCLIP29.78■■■□□ 2.36
USP42-205ENST00000465073 TCERG1O14776 1098 aaKnown RBP29.77■■■□□ 2.36
USP42-205ENST00000465073 AIMP1Q12904 312 aaKnown RBP29.77■■■□□ 2.36
USP42-205ENST00000465073 ATP6V0A2Q9Y487 856 aa29.76■■■□□ 2.35
USP42-205ENST00000465073 GJA3Q9Y6H8 435 aa29.76■■■□□ 2.35
USP42-205ENST00000465073 TMEM88BA6NKF7 163 aa29.75■■■□□ 2.35
USP42-205ENST00000465073 NLRP10Q86W26 655 aa29.75■■■□□ 2.35
USP42-205ENST00000465073 TRIM35Q9UPQ4 493 aa29.75■■■□□ 2.35
USP42-205ENST00000465073 CNTNAP1P78357 1384 aa29.75■■■□□ 2.35
USP42-205ENST00000465073 TCIRG1Q13488 830 aa29.74■■■□□ 2.35
USP42-205ENST00000465073 VPS33BQ9H267 617 aa29.74■■■□□ 2.35
USP42-205ENST00000465073 LAS1LQ9Y4W2 734 aaKnown RBP29.74■■■□□ 2.35
USP42-205ENST00000465073 COL4A5P29400 1685 aa29.74■■■□□ 2.35
USP42-205ENST00000465073 NIM1KQ8IY84 436 aa29.74■■■□□ 2.35
USP42-205ENST00000465073 TNS4Q8IZW8 715 aa29.74■■■□□ 2.35
USP42-205ENST00000465073 CNTROBQ8N137 903 aa29.74■■■□□ 2.35
USP42-205ENST00000465073 BBOX1O75936 387 aa29.73■■■□□ 2.35
USP42-205ENST00000465073 LMOD1P29536 600 aaPredicted RBP29.73■■■□□ 2.35
USP42-205ENST00000465073 KRT24Q2M2I5 525 aa29.73■■■□□ 2.35
USP42-205ENST00000465073 SLC51AQ86UW1 340 aa29.73■■■□□ 2.35
USP42-205ENST00000465073 ABCC4O15439 1325 aa29.72■■■□□ 2.35
USP42-205ENST00000465073 ADAMTS8Q9UP79 889 aa29.72■■■□□ 2.35
USP42-205ENST00000465073 ADAMTSL1Q8N6G6 1762 aa29.72■■■□□ 2.35
USP42-205ENST00000465073 PPIP5K2O43314 1243 aa29.71■■■□□ 2.35
USP42-205ENST00000465073 MAP1SQ66K74 1059 aaPredicted RBP29.71■■■□□ 2.35
USP42-205ENST00000465073 TRMT112Q9UI30 125 aaKnown RBP29.71■■■□□ 2.35
USP42-205ENST00000465073 HOXB7P09629 217 aa29.7■■■□□ 2.35
USP42-205ENST00000465073 HCLS1P14317 486 aaPredicted RBP29.7■■■□□ 2.35
USP42-205ENST00000465073 SUPT20HQ8NEM7 779 aa29.7■■■□□ 2.35
USP42-205ENST00000465073 CHPF2Q9P2E5 772 aa29.7■■■□□ 2.35
USP42-205ENST00000465073 SH3TC1Q8TE82 1336 aa29.69■■■□□ 2.34
USP42-205ENST00000465073 SP8Q8IXZ3 490 aa29.69■■■□□ 2.34
USP42-205ENST00000465073 RTFDC1Q9BY42 306 aaPredicted RBP29.69■■■□□ 2.34
USP42-205ENST00000465073 SCNN1DP51172 638 aa29.68■■■□□ 2.34
USP42-205ENST00000465073 HDGFL1Q5TGJ6 251 aa29.68■■■□□ 2.34
USP42-205ENST00000465073 AOC3Q16853 763 aa29.68■■■□□ 2.34
USP42-205ENST00000465073 DDX46Q7L014 1031 aaKnown RBP29.68■■■□□ 2.34
USP42-205ENST00000465073 PLBD2Q8NHP8 589 aa29.68■■■□□ 2.34
USP42-205ENST00000465073 EPS15P42566 896 aa29.67■■■□□ 2.34
USP42-205ENST00000465073 DBF4Q9UBU7 674 aaPredicted RBP29.67■■■□□ 2.34
USP42-205ENST00000465073 DPP8Q6V1X1 898 aaPredicted RBP29.66■■■□□ 2.34
USP42-205ENST00000465073 MPNDQ8N594 471 aa29.66■■■□□ 2.34
USP42-205ENST00000465073 CFAP44Q96MT7 982 aa29.66■■■□□ 2.34
USP42-205ENST00000465073 VEGFBP49765 207 aa29.65■■■□□ 2.34
USP42-205ENST00000465073 ANKRD13DQ6ZTN6 518 aa29.65■■■□□ 2.34
USP42-205ENST00000465073 USP50Q70EL3 339 aaPredicted RBP29.65■■■□□ 2.34
USP42-205ENST00000465073 ZNRF3Q9ULT6 936 aa29.65■■■□□ 2.34
USP42-205ENST00000465073 ANKRD36CQ5JPF3 1778 aa29.65■■■□□ 2.34
USP42-205ENST00000465073 GRAPQ13588 217 aa29.64■■■□□ 2.34
USP42-205ENST00000465073 GRAPLQ8TC17 118 aaPredicted RBP29.64■■■□□ 2.34
USP42-205ENST00000465073 TMC4Q7Z404 712 aa29.62■■■□□ 2.33
USP42-205ENST00000465073 HYPKQ9NX55 129 aa29.62■■■□□ 2.33
USP42-205ENST00000465073 RASSF10A6NK89 507 aa29.61■■■□□ 2.33
USP42-205ENST00000465073 CXCL9Q07325 125 aa29.61■■■□□ 2.33
USP42-205ENST00000465073 DUSP27Q5VZP5 1158 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms