RNA–Protein interactions for RNA: ENST00000464266.1

HOXB3-203, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-203ENST00000464266 THSD4Q6ZMP0 1018 aa7.36□□□□□ -1.23
HOXB3-203ENST00000464266 GPR152Q8TDT2 470 aa7.36□□□□□ -1.23
HOXB3-203ENST00000464266 HS3ST6Q96QI5 342 aa7.36□□□□□ -1.23
HOXB3-203ENST00000464266 ARHGEF10LQ9HCE6 1279 aa7.36□□□□□ -1.23
HOXB3-203ENST00000464266 HCN4Q9Y3Q4 1203 aa7.36□□□□□ -1.23
HOXB3-203ENST00000464266 USP3Q9Y6I4 520 aa7.36□□□□□ -1.23
HOXB3-203ENST00000464266 SHROOM2Q13796 1616 aa7.36□□□□□ -1.23
HOXB3-203ENST00000464266 CEP170Q5SW79 1584 aa7.36□□□□□ -1.23
HOXB3-203ENST00000464266 GIPC1O14908 333 aa7.35□□□□□ -1.23
HOXB3-203ENST00000464266 LILRA1O75019 489 aa7.35□□□□□ -1.23
HOXB3-203ENST00000464266 RPLP1P05386 114 aaKnown RBP7.35□□□□□ -1.23
HOXB3-203ENST00000464266 GJA8P48165 433 aa7.35□□□□□ -1.23
HOXB3-203ENST00000464266 HIRAP54198 1017 aaPredicted RBP7.35□□□□□ -1.23
HOXB3-203ENST00000464266 TRIM32Q13049 653 aa7.35□□□□□ -1.23
HOXB3-203ENST00000464266 TEAD4Q15561 434 aa7.35□□□□□ -1.23
HOXB3-203ENST00000464266 NFE2L2Q16236 605 aa7.35□□□□□ -1.23
HOXB3-203ENST00000464266 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.35□□□□□ -1.23
HOXB3-203ENST00000464266 TJAP1Q5JTD0 557 aa7.35□□□□□ -1.23
HOXB3-203ENST00000464266 NLGN1Q8N2Q7 840 aa7.35□□□□□ -1.23
HOXB3-203ENST00000464266 NUDT16Q96DE0 195 aaKnown RBP7.35□□□□□ -1.23
HOXB3-203ENST00000464266 XAGE2Q96GT9 111 aa7.35□□□□□ -1.23
HOXB3-203ENST00000464266 SPACA7Q96KW9 195 aa7.35□□□□□ -1.23
HOXB3-203ENST00000464266 C12orf49Q9H741 205 aa7.35□□□□□ -1.23
HOXB3-203ENST00000464266 FAM13BQ9NYF5 915 aa7.35□□□□□ -1.23
HOXB3-203ENST00000464266 KLK14Q9P0G3 267 aa7.35□□□□□ -1.23
HOXB3-203ENST00000464266 NOS2P35228 1153 aa7.34□□□□□ -1.23
HOXB3-203ENST00000464266 WNT7BP56706 349 aa7.34□□□□□ -1.23
HOXB3-203ENST00000464266 PAK2Q13177 524 aa7.34□□□□□ -1.23
HOXB3-203ENST00000464266 SH3PXD2AQ5TCZ1 1133 aa7.34□□□□□ -1.23
HOXB3-203ENST00000464266 TREML1Q86YW5 311 aa7.34□□□□□ -1.23
HOXB3-203ENST00000464266 EHBP1Q8NDI1 1231 aa7.34□□□□□ -1.23
HOXB3-203ENST00000464266 MRFAP1L1Q96HT8 127 aa7.34□□□□□ -1.23
HOXB3-203ENST00000464266 CDK15Q96Q40 435 aa7.34□□□□□ -1.23
HOXB3-203ENST00000464266 CABP1Q9NZU7 370 aa7.34□□□□□ -1.23
HOXB3-203ENST00000464266 USP31Q70CQ4 1352 aa7.33□□□□□ -1.24
HOXB3-203ENST00000464266 TOP2AP11388 1531 aaKnown RBP7.33□□□□□ -1.24
HOXB3-203ENST00000464266 GRIN2BQ13224 1484 aa7.33□□□□□ -1.24
HOXB3-203ENST00000464266 IL2RAP01589 272 aa7.33□□□□□ -1.24
HOXB3-203ENST00000464266 ATF4P18848 351 aaPredicted RBP7.33□□□□□ -1.24
HOXB3-203ENST00000464266 TAF1CQ15572 869 aaPredicted RBP7.33□□□□□ -1.24
HOXB3-203ENST00000464266 PPP1R26Q5T8A7 1209 aaPredicted RBP7.33□□□□□ -1.24
HOXB3-203ENST00000464266 JAZF1Q86VZ6 243 aa7.33□□□□□ -1.24
HOXB3-203ENST00000464266 CKAP2LQ8IYA6 745 aa7.33□□□□□ -1.24
HOXB3-203ENST00000464266 CCDC116Q8IYX3 515 aa7.33□□□□□ -1.24
HOXB3-203ENST00000464266 NKX2-3Q8TAU0 364 aa7.33□□□□□ -1.24
HOXB3-203ENST00000464266 CNKSR1Q969H4 720 aa7.33□□□□□ -1.24
HOXB3-203ENST00000464266 L3MBTL2Q969R5 705 aa7.33□□□□□ -1.24
HOXB3-203ENST00000464266 GPRASP2Q96D09 838 aa7.33□□□□□ -1.24
HOXB3-203ENST00000464266 PHACTR1Q9C0D0 580 aa7.33□□□□□ -1.24
HOXB3-203ENST00000464266 GGNBP2Q9H3C7 697 aa7.33□□□□□ -1.24
HOXB3-203ENST00000464266 PBRM1Q86U86 1689 aa7.32□□□□□ -1.24
HOXB3-203ENST00000464266 hCG_2014768A0A024R1R8 64 aa7.32□□□□□ -1.24
HOXB3-203ENST00000464266 MARCH6O60337 910 aa7.32□□□□□ -1.24
HOXB3-203ENST00000464266 IBSPP21815 317 aaPredicted RBP7.32□□□□□ -1.24
HOXB3-203ENST00000464266 ADD1P35611 737 aaKnown RBP7.32□□□□□ -1.24
HOXB3-203ENST00000464266 GRM5P41594 1212 aa7.32□□□□□ -1.24
HOXB3-203ENST00000464266 IGBP1P78318 339 aa7.32□□□□□ -1.24
HOXB3-203ENST00000464266 SKOR1P84550 965 aa7.32□□□□□ -1.24
HOXB3-203ENST00000464266 TCEAL1Q15170 157 aa7.32□□□□□ -1.24
HOXB3-203ENST00000464266 PTPROQ16827 1216 aa7.32□□□□□ -1.24
HOXB3-203ENST00000464266 MEI1Q5TIA1 1274 aa7.32□□□□□ -1.24
HOXB3-203ENST00000464266 NOL8Q76FK4 1167 aaKnown RBP7.32□□□□□ -1.24
HOXB3-203ENST00000464266 ZDHHC1Q8WTX9 485 aa7.32□□□□□ -1.24
HOXB3-203ENST00000464266 ESYT1Q9BSJ8 1104 aa7.32□□□□□ -1.24
HOXB3-203ENST00000464266 V9GY48 417 aaPredicted RBP7.32□□□□□ -1.24
HOXB3-203ENST00000464266 TDRD9Q8NDG6 1382 aaKnown RBP7.32□□□□□ -1.24
HOXB3-203ENST00000464266 RAD54L2Q9Y4B4 1467 aa7.31□□□□□ -1.24
HOXB3-203ENST00000464266 POTEB3A0JP26 581 aa7.31□□□□□ -1.24
HOXB3-203ENST00000464266 A6NHS1 94 aa7.31□□□□□ -1.24
HOXB3-203ENST00000464266 HSD3B2P26439 372 aa7.31□□□□□ -1.24
HOXB3-203ENST00000464266 ST13P50502 369 aaKnown RBP7.31□□□□□ -1.24
HOXB3-203ENST00000464266 POTEBQ6S5H4 581 aa7.31□□□□□ -1.24
HOXB3-203ENST00000464266 CCDC74AQ96AQ1 378 aa7.31□□□□□ -1.24
HOXB3-203ENST00000464266 OTUD5Q96G74 571 aa7.31□□□□□ -1.24
HOXB3-203ENST00000464266 GPATCH3Q96I76 525 aa7.31□□□□□ -1.24
HOXB3-203ENST00000464266 OSBPL7Q9BZF2 842 aa7.31□□□□□ -1.24
HOXB3-203ENST00000464266 NEUROD4Q9HD90 331 aa7.31□□□□□ -1.24
HOXB3-203ENST00000464266 PGPEP1Q9NXJ5 209 aa7.31□□□□□ -1.24
HOXB3-203ENST00000464266 FAM8A1Q9UBU6 413 aa7.31□□□□□ -1.24
HOXB3-203ENST00000464266 DMGDHQ9UI17 866 aaKnown RBP7.31□□□□□ -1.24
HOXB3-203ENST00000464266 PARP3Q9Y6F1 533 aa7.31□□□□□ -1.24
HOXB3-203ENST00000464266 TOP2BQ02880 1626 aa7.3□□□□□ -1.24
HOXB3-203ENST00000464266 TSPOAP1O95153 1857 aa7.3□□□□□ -1.24
HOXB3-203ENST00000464266 K7ELQ4 463 aaPredicted RBP7.3□□□□□ -1.24
HOXB3-203ENST00000464266 RAB11FIP3O75154 756 aa7.3□□□□□ -1.24
HOXB3-203ENST00000464266 SSBP05455 408 aaKnown RBP eCLIP7.3□□□□□ -1.24
HOXB3-203ENST00000464266 RNF187Q5TA31 235 aaPredicted RBP7.3□□□□□ -1.24
HOXB3-203ENST00000464266 NBPF6Q5VWK0 638 aa7.3□□□□□ -1.24
HOXB3-203ENST00000464266 PI16Q6UXB8 463 aa7.3□□□□□ -1.24
HOXB3-203ENST00000464266 MICAL1Q8TDZ2 1067 aa7.3□□□□□ -1.24
HOXB3-203ENST00000464266 KCTD12Q96CX2 325 aaKnown RBP7.3□□□□□ -1.24
HOXB3-203ENST00000464266 NBPF4Q96M43 638 aa7.3□□□□□ -1.24
HOXB3-203ENST00000464266 MRPL42Q9Y6G3 142 aaKnown RBP7.3□□□□□ -1.24
HOXB3-203ENST00000464266 PPRC1Q5VV67 1664 aaKnown RBP7.29□□□□□ -1.24
HOXB3-203ENST00000464266 PPEF1O14829 653 aaPredicted RBP7.29□□□□□ -1.24
HOXB3-203ENST00000464266 USP17L7P0C7H9 530 aa7.29□□□□□ -1.24
HOXB3-203ENST00000464266 XRCC5P13010 732 aaKnown RBP7.29□□□□□ -1.24
HOXB3-203ENST00000464266 C1orf53Q5VUE5 145 aa7.29□□□□□ -1.24
HOXB3-203ENST00000464266 ERMP1Q7Z2K6 904 aa7.29□□□□□ -1.24
HOXB3-203ENST00000464266 EPS8L3Q8TE67 593 aaKnown RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms