RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 SNX14Q9Y5W7 946 aa7.36□□□□□ -1.23
UBQLN4-202ENST00000459954 MRC1P22897 1456 aa7.36□□□□□ -1.23
UBQLN4-202ENST00000459954 CCDC171Q6TFL3 1326 aa7.35□□□□□ -1.23
UBQLN4-202ENST00000459954 SYCE3A1L190 88 aa7.35□□□□□ -1.23
UBQLN4-202ENST00000459954 DYNC1I1O14576 645 aa7.35□□□□□ -1.23
UBQLN4-202ENST00000459954 TSGA10IPQ3SY00 556 aa7.35□□□□□ -1.23
UBQLN4-202ENST00000459954 PLEKHO1Q53GL0 409 aaPredicted RBP7.35□□□□□ -1.23
UBQLN4-202ENST00000459954 USP48Q86UV5 1035 aa7.35□□□□□ -1.23
UBQLN4-202ENST00000459954 CLASRPQ8N2M8 674 aaKnown RBP7.35□□□□□ -1.23
UBQLN4-202ENST00000459954 EVI5LQ96CN4 794 aa7.35□□□□□ -1.23
UBQLN4-202ENST00000459954 ZSWIM6Q9HCJ5 1215 aa7.35□□□□□ -1.23
UBQLN4-202ENST00000459954 RBM27Q9P2N5 1060 aaKnown RBP7.35□□□□□ -1.23
UBQLN4-202ENST00000459954 DBF4Q9UBU7 674 aaPredicted RBP7.35□□□□□ -1.23
UBQLN4-202ENST00000459954 LAMB4A4D0S4 1761 aa7.35□□□□□ -1.23
UBQLN4-202ENST00000459954 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.35□□□□□ -1.23
UBQLN4-202ENST00000459954 ADCY9O60503 1353 aa7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 COL15A1P39059 1388 aa7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 RFX7Q2KHR2 1363 aa7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 SPEF2Q9C093 1822 aa7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 ERBB3P21860 1342 aa7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 SPATA31A1Q5TZJ5 1347 aa7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 SRGAP3O43295 1099 aa7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 STX6O43752 255 aa7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 F13A1P00488 732 aa7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 CSB-PGBD3P0DP91 1061 aa7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 AK2P54819 239 aa7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 ANKRD1Q15327 319 aa7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 TOM1L2Q6ZVM7 507 aa7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 PHAXQ9H814 394 aaKnown RBP7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 ECHDC1Q9NTX5 307 aa7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 HYPKQ9NX55 129 aa7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 NSFL1CQ9UNZ2 370 aaKnown RBP7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 CCDC9Q9Y3X0 531 aaKnown RBP7.34□□□□□ -1.23
UBQLN4-202ENST00000459954 ELP1O95163 1332 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 C5P01031 1676 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 COL5A2P05997 1499 aaPredicted RBP7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 PI4KAP2A4QPH2 592 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 PDCP20941 246 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 SYT1P21579 422 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 PSMA5P28066 241 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 HMGN5P82970 282 aaKnown RBP7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 TEFQ10587 303 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 NECTIN1Q15223 517 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 CHRNA2Q15822 529 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 POTEAQ6S8J7 498 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 SASS6Q6UVJ0 657 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 KSR2Q6VAB6 950 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 PPP4R3CPQ6ZMV5 832 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 NUTM1Q86Y26 1132 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 PI4KAP1Q8N8J0 262 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 PRIMPOLQ96LW4 560 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 IL1RAPL2Q9NP60 686 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 DIAPH3Q9NSV4 1193 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 USP25Q9UHP3 1055 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 SMC3Q9UQE7 1217 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 CYP46A1Q9Y6A2 500 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 ARFGEF2Q9Y6D5 1785 aa7.33□□□□□ -1.24
UBQLN4-202ENST00000459954 RNMTO43148 476 aaKnown RBP7.32□□□□□ -1.24
UBQLN4-202ENST00000459954 DDX58O95786 925 aaKnown RBP7.32□□□□□ -1.24
UBQLN4-202ENST00000459954 NBPF7P0C2Y1 421 aaPredicted RBP7.32□□□□□ -1.24
UBQLN4-202ENST00000459954 ZKSCAN1P17029 563 aaPredicted RBP7.32□□□□□ -1.24
UBQLN4-202ENST00000459954 KIAA2012Q0VF49 1180 aa7.32□□□□□ -1.24
UBQLN4-202ENST00000459954 RUFY3Q7L099 469 aa7.32□□□□□ -1.24
UBQLN4-202ENST00000459954 LINS1Q8NG48 757 aa7.32□□□□□ -1.24
UBQLN4-202ENST00000459954 ANKRD24Q8TF21 1146 aa7.32□□□□□ -1.24
UBQLN4-202ENST00000459954 MAP4K1Q92918 833 aa7.32□□□□□ -1.24
UBQLN4-202ENST00000459954 FUCA2Q9BTY2 467 aa7.32□□□□□ -1.24
UBQLN4-202ENST00000459954 UPF3BQ9BZI7 483 aaKnown RBP7.32□□□□□ -1.24
UBQLN4-202ENST00000459954 HMG20BQ9P0W2 317 aa7.32□□□□□ -1.24
UBQLN4-202ENST00000459954 AXIN2Q9Y2T1 843 aa7.32□□□□□ -1.24
UBQLN4-202ENST00000459954 MYH7P12883 1935 aa7.32□□□□□ -1.24
UBQLN4-202ENST00000459954 PKD1L3Q7Z443 1732 aa7.32□□□□□ -1.24
UBQLN4-202ENST00000459954 PARP4Q9UKK3 1724 aaKnown RBP7.32□□□□□ -1.24
UBQLN4-202ENST00000459954 COL18A1P39060 1754 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 BTBD11A6QL63 1104 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 EXOC5O00471 708 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 BCL9O00512 1426 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 SOX12O15370 315 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 KDM4AO75164 1064 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 GIGYF1O75420 1035 aaPredicted RBP7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 CAVIN2O95810 425 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 IL2RBP14784 551 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 RNF20Q5VTR2 975 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 NBPF6Q5VWK0 638 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 TSHZ3Q63HK5 1081 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 LARP1Q6PKG0 1096 aaKnown RBP7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 FAM196AQ6ZSG2 479 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 SEPT12Q8IYM1 358 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 RASEFQ8IZ41 740 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 PIBF1Q8WXW3 757 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 RAPGEF4Q8WZA2 1011 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 NBPF4Q96M43 638 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 ABCA3Q99758 1704 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 IL25Q9H293 177 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 DDX21Q9NR30 783 aaKnown RBP eCLIP7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 STRN4Q9NRL3 753 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 PDRG1Q9NUG6 133 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 SPTLC3Q9NUV7 552 aa7.31□□□□□ -1.24
UBQLN4-202ENST00000459954 NLRP2Q9NX02 1062 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms