RNA–Protein interactions for RNA: ENST00000459645.1

RGPD6-206, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

TSL 3

Gene RGPD6, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-206ENST00000459645 DLEC1Q9Y238 1755 aa5.69□□□□□ -1.5
RGPD6-206ENST00000459645 MYH14Q7Z406 1995 aaKnown RBP5.68□□□□□ -1.5
RGPD6-206ENST00000459645 SOX1O00570 391 aaPredicted RBP5.68□□□□□ -1.5
RGPD6-206ENST00000459645 MAFGO15525 162 aa5.68□□□□□ -1.5
RGPD6-206ENST00000459645 PHKG2P15735 406 aa5.68□□□□□ -1.5
RGPD6-206ENST00000459645 CANXP27824 592 aaKnown RBP5.68□□□□□ -1.5
RGPD6-206ENST00000459645 LMOD1P29536 600 aaPredicted RBP5.68□□□□□ -1.5
RGPD6-206ENST00000459645 PDE6BP35913 854 aa5.68□□□□□ -1.5
RGPD6-206ENST00000459645 FKBP4Q02790 459 aaKnown RBP eCLIP5.68□□□□□ -1.5
RGPD6-206ENST00000459645 USP50Q70EL3 339 aaPredicted RBP5.68□□□□□ -1.5
RGPD6-206ENST00000459645 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.68□□□□□ -1.5
RGPD6-206ENST00000459645 BRIP1Q9BX63 1249 aa5.68□□□□□ -1.5
RGPD6-206ENST00000459645 SLC12A5Q9H2X9 1139 aa5.68□□□□□ -1.5
RGPD6-206ENST00000459645 HDAC9Q9UKV0 1011 aa5.68□□□□□ -1.5
RGPD6-206ENST00000459645 SPG7Q9UQ90 795 aa5.68□□□□□ -1.5
RGPD6-206ENST00000459645 SOS1Q07889 1333 aaPredicted RBP5.68□□□□□ -1.5
RGPD6-206ENST00000459645 MON2Q7Z3U7 1717 aa5.68□□□□□ -1.5
RGPD6-206ENST00000459645 EDC4Q6P2E9 1401 aaKnown RBP5.67□□□□□ -1.5
RGPD6-206ENST00000459645 SRGNP10124 158 aa5.67□□□□□ -1.5
RGPD6-206ENST00000459645 COL9A1P20849 921 aa5.67□□□□□ -1.5
RGPD6-206ENST00000459645 CCDC93Q567U6 631 aa5.67□□□□□ -1.5
RGPD6-206ENST00000459645 SOGA3Q5TF21 947 aa5.67□□□□□ -1.5
RGPD6-206ENST00000459645 PRR5LQ6MZQ0 368 aa5.67□□□□□ -1.5
RGPD6-206ENST00000459645 RGMBQ6NW40 437 aa5.67□□□□□ -1.5
RGPD6-206ENST00000459645 CNKSR1Q969H4 720 aa5.67□□□□□ -1.5
RGPD6-206ENST00000459645 DNAJC2Q99543 621 aaKnown RBP5.67□□□□□ -1.5
RGPD6-206ENST00000459645 NARFQ9UHQ1 456 aa5.67□□□□□ -1.5
RGPD6-206ENST00000459645 NOP58Q9Y2X3 529 aaKnown RBP5.67□□□□□ -1.5
RGPD6-206ENST00000459645 NRXN2Q9P2S2 1712 aa5.67□□□□□ -1.5
RGPD6-206ENST00000459645 KIAA0100Q14667 2235 aaKnown RBP5.67□□□□□ -1.5
RGPD6-206ENST00000459645 RTL1A6NKG5 1358 aa5.67□□□□□ -1.5
RGPD6-206ENST00000459645 COL4A5P29400 1685 aa5.66□□□□□ -1.5
RGPD6-206ENST00000459645 COL5A3P25940 1745 aaPredicted RBP5.66□□□□□ -1.5
RGPD6-206ENST00000459645 PPM1GO15355 546 aaPredicted RBP5.66□□□□□ -1.5
RGPD6-206ENST00000459645 TBC1D8O95759 1140 aa5.66□□□□□ -1.5
RGPD6-206ENST00000459645 IARSP41252 1262 aaKnown RBP5.66□□□□□ -1.5
RGPD6-206ENST00000459645 STYK1Q6J9G0 422 aa5.66□□□□□ -1.5
RGPD6-206ENST00000459645 TMC1Q8TDI8 760 aa5.66□□□□□ -1.5
RGPD6-206ENST00000459645 LRCH3Q96II8 777 aa5.66□□□□□ -1.5
RGPD6-206ENST00000459645 COG3Q96JB2 828 aa5.66□□□□□ -1.5
RGPD6-206ENST00000459645 SLX4Q8IY92 1834 aa5.66□□□□□ -1.5
RGPD6-206ENST00000459645 A0A1W2PP64 1363 aa5.66□□□□□ -1.5
RGPD6-206ENST00000459645 COL11A2P13942 1736 aaPredicted RBP5.65□□□□□ -1.5
RGPD6-206ENST00000459645 SCN11AQ9UI33 1791 aa5.65□□□□□ -1.5
RGPD6-206ENST00000459645 AFDNP55196 1824 aaKnown RBP5.65□□□□□ -1.5
RGPD6-206ENST00000459645 ZNF157P51786 506 aaPredicted RBP5.65□□□□□ -1.5
RGPD6-206ENST00000459645 HIRAP54198 1017 aaPredicted RBP5.65□□□□□ -1.5
RGPD6-206ENST00000459645 CALD1Q05682 793 aaKnown RBP5.65□□□□□ -1.5
RGPD6-206ENST00000459645 TBC1D9BQ66K14 1250 aa5.65□□□□□ -1.5
RGPD6-206ENST00000459645 HDGFL2Q7Z4V5 671 aaPredicted RBP5.65□□□□□ -1.5
RGPD6-206ENST00000459645 USP48Q86UV5 1035 aa5.65□□□□□ -1.5
RGPD6-206ENST00000459645 DNAJC10Q8IXB1 793 aa5.65□□□□□ -1.5
RGPD6-206ENST00000459645 IFNL2Q8IZJ0 200 aa5.65□□□□□ -1.5
RGPD6-206ENST00000459645 CCDC102AQ96A19 550 aa5.65□□□□□ -1.5
RGPD6-206ENST00000459645 ZFP91Q96JP5 570 aaPredicted RBP5.65□□□□□ -1.5
RGPD6-206ENST00000459645 PRO3102Q9H379 93 aa5.65□□□□□ -1.5
RGPD6-206ENST00000459645 RNF216Q9NWF9 866 aaPredicted RBP5.65□□□□□ -1.5
RGPD6-206ENST00000459645 PGAP2Q9UHJ9 254 aa5.65□□□□□ -1.5
RGPD6-206ENST00000459645 PDZRN3Q9UPQ7 1066 aa5.65□□□□□ -1.5
RGPD6-206ENST00000459645 COL15A1P39059 1388 aa5.65□□□□□ -1.51
RGPD6-206ENST00000459645 PIEZO1Q92508 2521 aa5.65□□□□□ -1.51
RGPD6-206ENST00000459645 ZNF831Q5JPB2 1677 aa5.64□□□□□ -1.51
RGPD6-206ENST00000459645 ERVV-2B6SEH9 535 aa5.64□□□□□ -1.51
RGPD6-206ENST00000459645 GPR25O00155 361 aa5.64□□□□□ -1.51
RGPD6-206ENST00000459645 SLC10A3P09131 477 aa5.64□□□□□ -1.51
RGPD6-206ENST00000459645 EIF6P56537 245 aaKnown RBP5.64□□□□□ -1.51
RGPD6-206ENST00000459645 SLC51AQ86UW1 340 aa5.64□□□□□ -1.51
RGPD6-206ENST00000459645 CEP120Q8N960 986 aa5.64□□□□□ -1.51
RGPD6-206ENST00000459645 JDP2Q8WYK2 163 aa5.64□□□□□ -1.51
RGPD6-206ENST00000459645 MASTLQ96GX5 879 aa5.64□□□□□ -1.51
RGPD6-206ENST00000459645 R3HDMLQ9H3Y0 253 aa5.64□□□□□ -1.51
RGPD6-206ENST00000459645 GBA2Q9HCG7 927 aaPredicted RBP5.64□□□□□ -1.51
RGPD6-206ENST00000459645 ADARB2Q9NS39 739 aaKnown RBP5.64□□□□□ -1.51
RGPD6-206ENST00000459645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.64□□□□□ -1.51
RGPD6-206ENST00000459645 GPRC5DQ9NZD1 345 aa5.64□□□□□ -1.51
RGPD6-206ENST00000459645 ZBTB1Q9Y2K1 713 aa5.64□□□□□ -1.51
RGPD6-206ENST00000459645 ERBB4Q15303 1308 aa5.64□□□□□ -1.51
RGPD6-206ENST00000459645 LAMA2P24043 3122 aaKnown RBP5.64□□□□□ -1.51
RGPD6-206ENST00000459645 TRPM7Q96QT4 1865 aa5.64□□□□□ -1.51
RGPD6-206ENST00000459645 PRUNE2Q8WUY3 3088 aa5.63□□□□□ -1.51
RGPD6-206ENST00000459645 ANKRD31Q8N7Z5 1873 aa5.63□□□□□ -1.51
RGPD6-206ENST00000459645 SHTN1A0MZ66 631 aa5.63□□□□□ -1.51
RGPD6-206ENST00000459645 PLA2G5P39877 138 aa5.63□□□□□ -1.51
RGPD6-206ENST00000459645 INTS3Q68E01 1043 aaKnown RBP5.63□□□□□ -1.51
RGPD6-206ENST00000459645 Q7L0L9 218 aa5.63□□□□□ -1.51
RGPD6-206ENST00000459645 CDC37L1Q7L3B6 337 aa5.63□□□□□ -1.51
RGPD6-206ENST00000459645 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.63□□□□□ -1.51
RGPD6-206ENST00000459645 RTKN2Q8IZC4 609 aa5.63□□□□□ -1.51
RGPD6-206ENST00000459645 TRPM4Q8TD43 1214 aa5.63□□□□□ -1.51
RGPD6-206ENST00000459645 LAS1LQ9Y4W2 734 aaKnown RBP5.63□□□□□ -1.51
RGPD6-206ENST00000459645 NCAPD2Q15021 1401 aa5.63□□□□□ -1.51
RGPD6-206ENST00000459645 MUC3AQ02505 3323 aa5.63□□□□□ -1.51
RGPD6-206ENST00000459645 CYP19A1P11511 503 aaPredicted RBP5.62□□□□□ -1.51
RGPD6-206ENST00000459645 GMPSP49915 693 aaPredicted RBP5.62□□□□□ -1.51
RGPD6-206ENST00000459645 MMP14P50281 582 aa5.62□□□□□ -1.51
RGPD6-206ENST00000459645 CABP4P57796 275 aa5.62□□□□□ -1.51
RGPD6-206ENST00000459645 CNPY4Q8N129 248 aa5.62□□□□□ -1.51
RGPD6-206ENST00000459645 DEFB123Q8N688 67 aa5.62□□□□□ -1.51
RGPD6-206ENST00000459645 CNBD1Q8NA66 436 aa5.62□□□□□ -1.51
RGPD6-206ENST00000459645 BBXQ8WY36 941 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms