RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 MAP3K9P80192 1104 aa11.63□□□□□ -0.55
SCN5A-210ENST00000455624 PUS7Q96PZ0 661 aaKnown RBP11.63□□□□□ -0.55
SCN5A-210ENST00000455624 SLC26A6Q9BXS9 759 aa11.63□□□□□ -0.55
SCN5A-210ENST00000455624 CCDC152Q4G0S7 254 aa11.63□□□□□ -0.55
SCN5A-210ENST00000455624 ERMNQ8TAM6 284 aa11.63□□□□□ -0.55
SCN5A-210ENST00000455624 CCDC61Q9Y6R9 512 aa11.63□□□□□ -0.55
SCN5A-210ENST00000455624 PTPRCP08575 1304 aa11.63□□□□□ -0.55
SCN5A-210ENST00000455624 FSD2A1L4K1 749 aa11.63□□□□□ -0.55
SCN5A-210ENST00000455624 IFI16Q16666 785 aaKnown RBP11.63□□□□□ -0.55
SCN5A-210ENST00000455624 TICAM2Q86XR7 235 aa11.63□□□□□ -0.55
SCN5A-210ENST00000455624 TMC6Q7Z403 805 aa11.62□□□□□ -0.55
SCN5A-210ENST00000455624 ARAP1Q96P48 1450 aa11.62□□□□□ -0.55
SCN5A-210ENST00000455624 ABCC11Q96J66 1382 aa11.62□□□□□ -0.55
SCN5A-210ENST00000455624 F6X3S4 739 aa11.62□□□□□ -0.55
SCN5A-210ENST00000455624 MAATS1Q7Z4T9 603 aa11.62□□□□□ -0.55
SCN5A-210ENST00000455624 HLTFQ14527 1009 aaKnown RBP eCLIP11.62□□□□□ -0.55
SCN5A-210ENST00000455624 CGNQ9P2M7 1197 aaKnown RBP11.62□□□□□ -0.55
SCN5A-210ENST00000455624 TIAM1Q13009 1591 aa11.62□□□□□ -0.55
SCN5A-210ENST00000455624 NKTRP30414 1462 aaKnown RBP11.62□□□□□ -0.55
SCN5A-210ENST00000455624 CCDC172P0C7W6 258 aa11.62□□□□□ -0.55
SCN5A-210ENST00000455624 MCM4P33991 863 aa11.62□□□□□ -0.55
SCN5A-210ENST00000455624 KANK3Q6NY19 840 aa11.62□□□□□ -0.55
SCN5A-210ENST00000455624 NCOA7Q8NI08 942 aa11.62□□□□□ -0.55
SCN5A-210ENST00000455624 PPP1R14CQ8TAE6 165 aa11.62□□□□□ -0.55
SCN5A-210ENST00000455624 IKBKGQ9Y6K9 419 aa11.62□□□□□ -0.55
SCN5A-210ENST00000455624 IARSP41252 1262 aaKnown RBP11.61□□□□□ -0.55
SCN5A-210ENST00000455624 OTUD6BQ8N6M0 293 aa11.61□□□□□ -0.55
SCN5A-210ENST00000455624 KIF18AQ8NI77 898 aa11.61□□□□□ -0.55
SCN5A-210ENST00000455624 RMND1Q9NWS8 449 aa11.61□□□□□ -0.55
SCN5A-210ENST00000455624 NBPF8Q3BBV2 869 aa11.61□□□□□ -0.55
SCN5A-210ENST00000455624 WDR70Q9NW82 654 aa11.61□□□□□ -0.55
SCN5A-210ENST00000455624 DBF4Q9UBU7 674 aaPredicted RBP11.61□□□□□ -0.55
SCN5A-210ENST00000455624 LIMCH1Q9UPQ0 1083 aa11.61□□□□□ -0.55
SCN5A-210ENST00000455624 IDEP14735 1019 aa11.61□□□□□ -0.55
SCN5A-210ENST00000455624 NBPF6Q5VWK0 638 aa11.61□□□□□ -0.55
SCN5A-210ENST00000455624 NBPF5PQ86XG9 351 aaPredicted RBP11.61□□□□□ -0.55
SCN5A-210ENST00000455624 NBPF4Q96M43 638 aa11.61□□□□□ -0.55
SCN5A-210ENST00000455624 USP16Q9Y5T5 823 aa11.61□□□□□ -0.55
SCN5A-210ENST00000455624 UQCRFS1P1P0C7P4 283 aa11.61□□□□□ -0.55
SCN5A-210ENST00000455624 ACTN2P35609 894 aa11.61□□□□□ -0.55
SCN5A-210ENST00000455624 DDX12PQ92771 950 aa11.61□□□□□ -0.55
SCN5A-210ENST00000455624 CDK13Q14004 1512 aaKnown RBP11.61□□□□□ -0.55
SCN5A-210ENST00000455624 STX6O43752 255 aa11.61□□□□□ -0.55
SCN5A-210ENST00000455624 PHACTR2O75167 634 aa11.61□□□□□ -0.55
SCN5A-210ENST00000455624 CTR9Q6PD62 1173 aa11.61□□□□□ -0.55
SCN5A-210ENST00000455624 PPP4R3BQ5MIZ7 849 aa11.6□□□□□ -0.55
SCN5A-210ENST00000455624 IFNL2Q8IZJ0 200 aa11.6□□□□□ -0.55
SCN5A-210ENST00000455624 CAMSAP2Q08AD1 1489 aa11.6□□□□□ -0.55
SCN5A-210ENST00000455624 CCDC175P0C221 793 aa11.6□□□□□ -0.55
SCN5A-210ENST00000455624 RAB11FIP4Q86YS3 637 aa11.6□□□□□ -0.55
SCN5A-210ENST00000455624 ZGPATQ8N5A5 531 aaKnown RBP11.6□□□□□ -0.55
SCN5A-210ENST00000455624 PICALMQ13492 652 aa11.6□□□□□ -0.55
SCN5A-210ENST00000455624 AMOTL2Q9Y2J4 779 aa11.6□□□□□ -0.55
SCN5A-210ENST00000455624 C6orf163Q5TEZ5 329 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 KRT13P13646 458 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 RGS22Q8NE09 1264 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 LARP6Q9BRS8 491 aaKnown RBP11.59□□□□□ -0.55
SCN5A-210ENST00000455624 F8W031 263 aaPredicted RBP11.59□□□□□ -0.55
SCN5A-210ENST00000455624 HAND2P61296 217 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 PLS1Q14651 629 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 LDHAL6AQ6ZMR3 332 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 KRT23Q9C075 422 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 PIK3R4Q99570 1358 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 BIN1O00499 593 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 HEATR3Q7Z4Q2 680 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 ZNF804AQ7Z570 1209 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 TTC21BQ7Z4L5 1316 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 A0A1W2PRG0 241 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 IFIT1BQ5T764 474 aaKnown RBP11.59□□□□□ -0.55
SCN5A-210ENST00000455624 DDX19AQ9NUU7 478 aaKnown RBP11.59□□□□□ -0.55
SCN5A-210ENST00000455624 CD109Q6YHK3 1445 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 ARHGEF11O15085 1522 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 HSF2BPO75031 334 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 ARL1P40616 181 aaPredicted RBP11.59□□□□□ -0.55
SCN5A-210ENST00000455624 GSDMDP57764 484 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 SPECC1Q5M775 1068 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 USP37Q86T82 979 aa11.59□□□□□ -0.55
SCN5A-210ENST00000455624 TRMT1Q9NXH9 659 aaKnown RBP11.59□□□□□ -0.55
SCN5A-210ENST00000455624 ATP5J2-PTCD1G3V325 749 aa11.58□□□□□ -0.55
SCN5A-210ENST00000455624 TRIM47Q96LD4 638 aa11.58□□□□□ -0.55
SCN5A-210ENST00000455624 MRVI1Q9Y6F6 885 aa11.58□□□□□ -0.55
SCN5A-210ENST00000455624 PTPN23Q9H3S7 1636 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 SYNJ1O43426 1573 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 RRAGBQ5VZM2 374 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 BBXQ8WY36 941 aaPredicted RBP11.58□□□□□ -0.56
SCN5A-210ENST00000455624 CC2D2AQ9P2K1 1620 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 STAT6P42226 847 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 ANKRD24Q8TF21 1146 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 SLC4A4Q9Y6R1 1079 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 RASAL2Q9UJF2 1139 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 ADGRL1O94910 1474 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 NEMFO60524 1076 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 ATP6V1AP38606 617 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 WTAPQ15007 396 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 ISM2Q6H9L7 571 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 MICU3Q86XE3 530 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 RAB3IL1Q8TBN0 382 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 NEK1Q96PY6 1258 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 JADE2Q9NQC1 790 aa11.58□□□□□ -0.56
SCN5A-210ENST00000455624 NESP48681 1621 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms