RNA–Protein interactions for RNA: ENST00000453707.6

CITED1-209, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CITED1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1-209ENST00000453707 CRY2Q49AN0 593 aa17.26■□□□□ 0.35
CITED1-209ENST00000453707 EAPPQ56P03 285 aaPredicted RBP17.26■□□□□ 0.35
CITED1-209ENST00000453707 HSP90AB3PQ58FF7 597 aa17.26■□□□□ 0.35
CITED1-209ENST00000453707 UTP14AQ9BVJ6 771 aaKnown RBP17.26■□□□□ 0.35
CITED1-209ENST00000453707 CACNA1SQ13698 1873 aa17.26■□□□□ 0.35
CITED1-209ENST00000453707 GRIPAP1Q4V328 841 aa17.25■□□□□ 0.35
CITED1-209ENST00000453707 COPS6Q7L5N1 327 aa17.25■□□□□ 0.35
CITED1-209ENST00000453707 JMYQ8N9B5 988 aa17.25■□□□□ 0.35
CITED1-209ENST00000453707 IBTKQ9P2D0 1353 aaPredicted RBP17.25■□□□□ 0.35
CITED1-209ENST00000453707 PPEF1O14829 653 aaPredicted RBP17.24■□□□□ 0.35
CITED1-209ENST00000453707 NTSR2O95665 410 aa17.24■□□□□ 0.35
CITED1-209ENST00000453707 EIF6P56537 245 aaKnown RBP17.24■□□□□ 0.35
CITED1-209ENST00000453707 LDHDQ86WU2 507 aa17.24■□□□□ 0.35
CITED1-209ENST00000453707 PSMD1Q99460 953 aa17.24■□□□□ 0.35
CITED1-209ENST00000453707 HACL1Q9UJ83 578 aa17.24■□□□□ 0.35
CITED1-209ENST00000453707 ZNF541Q9H0D2 1346 aa17.23■□□□□ 0.35
CITED1-209ENST00000453707 HOXA10P31260 410 aaPredicted RBP17.23■□□□□ 0.35
CITED1-209ENST00000453707 PDIA6Q15084 440 aa17.23■□□□□ 0.35
CITED1-209ENST00000453707 PROSER3Q2NL68 480 aa17.23■□□□□ 0.35
CITED1-209ENST00000453707 XAGE3Q8WTP9 111 aa17.23■□□□□ 0.35
CITED1-209ENST00000453707 L3MBTL3Q96JM7 780 aaPredicted RBP17.23■□□□□ 0.35
CITED1-209ENST00000453707 CRAMP1Q96RY5 1269 aa17.23■□□□□ 0.35
CITED1-209ENST00000453707 TAF1DQ9H5J8 278 aaPredicted RBP17.23■□□□□ 0.35
CITED1-209ENST00000453707 GJA3Q9Y6H8 435 aa17.23■□□□□ 0.35
CITED1-209ENST00000453707 ARFGEF2Q9Y6D5 1785 aa17.23■□□□□ 0.35
CITED1-209ENST00000453707 POTEIP0CG38 1075 aa17.22■□□□□ 0.35
CITED1-209ENST00000453707 POTEJP0CG39 1038 aa17.22■□□□□ 0.35
CITED1-209ENST00000453707 LARGE2Q8N3Y3 721 aa17.22■□□□□ 0.35
CITED1-209ENST00000453707 ADAMTS8Q9UP79 889 aa17.22■□□□□ 0.35
CITED1-209ENST00000453707 DICER1Q9UPY3 1922 aaKnown RBP17.21■□□□□ 0.35
CITED1-209ENST00000453707 FZD9O00144 591 aa17.21■□□□□ 0.35
CITED1-209ENST00000453707 CHL1O00533 1208 aa17.21■□□□□ 0.35
CITED1-209ENST00000453707 LMOD1P29536 600 aaPredicted RBP17.21■□□□□ 0.35
CITED1-209ENST00000453707 DDX21Q9NR30 783 aaKnown RBP eCLIP17.21■□□□□ 0.35
CITED1-209ENST00000453707 CREBZFQ9NS37 354 aa17.21■□□□□ 0.35
CITED1-209ENST00000453707 TRMT112Q9UI30 125 aaKnown RBP17.21■□□□□ 0.35
CITED1-209ENST00000453707 EPHX2P34913 555 aa17.2■□□□□ 0.34
CITED1-209ENST00000453707 HDGFL1Q5TGJ6 251 aa17.2■□□□□ 0.34
CITED1-209ENST00000453707 PNMA8AQ86V59 439 aaPredicted RBP17.2■□□□□ 0.34
CITED1-209ENST00000453707 NIM1KQ8IY84 436 aa17.2■□□□□ 0.34
CITED1-209ENST00000453707 GPC2Q8N158 579 aa17.2■□□□□ 0.34
CITED1-209ENST00000453707 RIC1Q4ADV7 1423 aa17.2■□□□□ 0.34
CITED1-209ENST00000453707 RNF123Q5XPI4 1314 aa17.2■□□□□ 0.34
CITED1-209ENST00000453707 NUP98P52948 1817 aa17.19■□□□□ 0.34
CITED1-209ENST00000453707 TCIRG1Q13488 830 aa17.19■□□□□ 0.34
CITED1-209ENST00000453707 KRT24Q2M2I5 525 aa17.19■□□□□ 0.34
CITED1-209ENST00000453707 LRP10Q7Z4F1 713 aa17.19■□□□□ 0.34
CITED1-209ENST00000453707 MKRN1Q9UHC7 482 aaKnown RBP17.19■□□□□ 0.34
CITED1-209ENST00000453707 TRIM35Q9UPQ4 493 aa17.19■□□□□ 0.34
CITED1-209ENST00000453707 PPIP5K2O43314 1243 aa17.18■□□□□ 0.34
CITED1-209ENST00000453707 HCLS1P14317 486 aaPredicted RBP17.18■□□□□ 0.34
CITED1-209ENST00000453707 SLC10A5Q5PT55 438 aa17.18■□□□□ 0.34
CITED1-209ENST00000453707 C3orf67Q6ZVT6 689 aa17.18■□□□□ 0.34
CITED1-209ENST00000453707 DDX46Q7L014 1031 aaKnown RBP17.18■□□□□ 0.34
CITED1-209ENST00000453707 NLRP10Q86W26 655 aa17.18■□□□□ 0.34
CITED1-209ENST00000453707 SUPT20HQ8NEM7 779 aa17.18■□□□□ 0.34
CITED1-209ENST00000453707 CHPF2Q9P2E5 772 aa17.18■□□□□ 0.34
CITED1-209ENST00000453707 PRKRIP1Q9H875 184 aaPredicted RBP17.17■□□□□ 0.34
CITED1-209ENST00000453707 DBF4Q9UBU7 674 aaPredicted RBP17.17■□□□□ 0.34
CITED1-209ENST00000453707 ATP6V0A2Q9Y487 856 aa17.17■□□□□ 0.34
CITED1-209ENST00000453707 SH3TC1Q8TE82 1336 aa17.17■□□□□ 0.34
CITED1-209ENST00000453707 BBOX1O75936 387 aa17.16■□□□□ 0.34
CITED1-209ENST00000453707 HOXB7P09629 217 aa17.16■□□□□ 0.34
CITED1-209ENST00000453707 HSPA1AP0DMV8 641 aaKnown RBP17.16■□□□□ 0.34
CITED1-209ENST00000453707 HSPA1BP0DMV9 641 aaKnown RBP17.16■□□□□ 0.34
CITED1-209ENST00000453707 CALD1Q05682 793 aaKnown RBP17.16■□□□□ 0.34
CITED1-209ENST00000453707 DPP8Q6V1X1 898 aaPredicted RBP17.16■□□□□ 0.34
CITED1-209ENST00000453707 ANKRD13DQ6ZTN6 518 aa17.16■□□□□ 0.34
CITED1-209ENST00000453707 ZNF428Q96B54 188 aa17.16■□□□□ 0.34
CITED1-209ENST00000453707 CFAP44Q96MT7 982 aa17.16■□□□□ 0.34
CITED1-209ENST00000453707 ABCC4O15439 1325 aa17.16■□□□□ 0.34
CITED1-209ENST00000453707 ZNF316A6NFI3 1004 aaPredicted RBP17.15■□□□□ 0.34
CITED1-209ENST00000453707 TMEM88BA6NKF7 163 aa17.15■□□□□ 0.34
CITED1-209ENST00000453707 AOC3Q16853 763 aa17.15■□□□□ 0.34
CITED1-209ENST00000453707 DUSP27Q5VZP5 1158 aa17.15■□□□□ 0.34
CITED1-209ENST00000453707 PLBD2Q8NHP8 589 aa17.15■□□□□ 0.34
CITED1-209ENST00000453707 COL13A1Q5TAT6 717 aaPredicted RBP17.14■□□□□ 0.33
CITED1-209ENST00000453707 MAP1SQ66K74 1059 aaPredicted RBP17.14■□□□□ 0.33
CITED1-209ENST00000453707 CNTROBQ8N137 903 aa17.14■□□□□ 0.33
CITED1-209ENST00000453707 MPNDQ8N594 471 aa17.14■□□□□ 0.33
CITED1-209ENST00000453707 VPS33BQ9H267 617 aa17.14■□□□□ 0.33
CITED1-209ENST00000453707 HYPKQ9NX55 129 aa17.14■□□□□ 0.33
CITED1-209ENST00000453707 SCN4AP35499 1836 aa17.13■□□□□ 0.33
CITED1-209ENST00000453707 ATP5J2-PTCD1G3V325 749 aa17.13■□□□□ 0.33
CITED1-209ENST00000453707 APAF1O14727 1248 aa17.13■□□□□ 0.33
CITED1-209ENST00000453707 GRAPQ13588 217 aa17.13■□□□□ 0.33
CITED1-209ENST00000453707 SP8Q8IXZ3 490 aa17.13■□□□□ 0.33
CITED1-209ENST00000453707 GRAPLQ8TC17 118 aaPredicted RBP17.13■□□□□ 0.33
CITED1-209ENST00000453707 MBIPQ9NS73 344 aa17.13■□□□□ 0.33
CITED1-209ENST00000453707 PASKQ96RG2 1323 aa17.13■□□□□ 0.33
CITED1-209ENST00000453707 GNAI1P63096 354 aa17.12■□□□□ 0.33
CITED1-209ENST00000453707 GOLGA2Q08379 1002 aa17.12■□□□□ 0.33
CITED1-209ENST00000453707 RIC3Q7Z5B4 369 aa17.12■□□□□ 0.33
CITED1-209ENST00000453707 SLC51AQ86UW1 340 aa17.12■□□□□ 0.33
CITED1-209ENST00000453707 TNS4Q8IZW8 715 aa17.12■□□□□ 0.33
CITED1-209ENST00000453707 ELL2O00472 640 aaPredicted RBP17.11■□□□□ 0.33
CITED1-209ENST00000453707 ITGBL1O95965 494 aaPredicted RBP17.11■□□□□ 0.33
CITED1-209ENST00000453707 RTL5Q5HYW3 569 aaPredicted RBP17.11■□□□□ 0.33
CITED1-209ENST00000453707 TMC4Q7Z404 712 aa17.11■□□□□ 0.33
CITED1-209ENST00000453707 FAM89AQ96GI7 184 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms