RNA–Protein interactions for RNA: ENST00000446548.1

LINC00578-204, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-204ENST00000446548 C1orf141Q5JVX7 400 aa11.12□□□□□ -0.63
LINC00578-204ENST00000446548 DDX19BQ9UMR2 479 aa11.12□□□□□ -0.63
LINC00578-204ENST00000446548 UBR2Q8IWV8 1755 aa11.11□□□□□ -0.63
LINC00578-204ENST00000446548 KCNQ3O43525 872 aa11.11□□□□□ -0.63
LINC00578-204ENST00000446548 PHKG2P15735 406 aa11.11□□□□□ -0.63
LINC00578-204ENST00000446548 EIF4A1P60842 406 aaKnown RBP11.11□□□□□ -0.63
LINC00578-204ENST00000446548 SKAP1Q86WV1 359 aa11.11□□□□□ -0.63
LINC00578-204ENST00000446548 ITPRIPQ8IWB1 547 aa11.11□□□□□ -0.63
LINC00578-204ENST00000446548 API5Q9BZZ5 524 aaKnown RBP11.11□□□□□ -0.63
LINC00578-204ENST00000446548 LAMB4A4D0S4 1761 aa11.11□□□□□ -0.63
LINC00578-204ENST00000446548 CYP27B1O15528 508 aa11.1□□□□□ -0.63
LINC00578-204ENST00000446548 RBM46Q8TBY0 533 aaKnown RBP11.1□□□□□ -0.63
LINC00578-204ENST00000446548 LRCH3Q96II8 777 aa11.1□□□□□ -0.63
LINC00578-204ENST00000446548 ZBTB40Q9NUA8 1239 aa11.1□□□□□ -0.63
LINC00578-204ENST00000446548 SPG7Q9UQ90 795 aa11.1□□□□□ -0.63
LINC00578-204ENST00000446548 HEG1Q9ULI3 1381 aa11.1□□□□□ -0.63
LINC00578-204ENST00000446548 PTPRCP08575 1304 aa11.09□□□□□ -0.63
LINC00578-204ENST00000446548 NWD2Q9ULI1 1742 aa11.09□□□□□ -0.63
LINC00578-204ENST00000446548 PTPN5P54829 565 aa11.09□□□□□ -0.63
LINC00578-204ENST00000446548 TEFQ10587 303 aa11.09□□□□□ -0.63
LINC00578-204ENST00000446548 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.09□□□□□ -0.63
LINC00578-204ENST00000446548 G2E3Q7L622 706 aa11.09□□□□□ -0.63
LINC00578-204ENST00000446548 CARD10Q9BWT7 1032 aa11.09□□□□□ -0.63
LINC00578-204ENST00000446548 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.09□□□□□ -0.63
LINC00578-204ENST00000446548 DISP2A7MBM2 1401 aa11.09□□□□□ -0.63
LINC00578-204ENST00000446548 SOWAHBA6NEL2 793 aa11.08□□□□□ -0.64
LINC00578-204ENST00000446548 LARP1Q6PKG0 1096 aaKnown RBP11.08□□□□□ -0.64
LINC00578-204ENST00000446548 TOM1L2Q6ZVM7 507 aa11.08□□□□□ -0.64
LINC00578-204ENST00000446548 IFNL2Q8IZJ0 200 aa11.08□□□□□ -0.64
LINC00578-204ENST00000446548 ITGB4P16144 1822 aa11.07□□□□□ -0.64
LINC00578-204ENST00000446548 BTBD11A6QL63 1104 aa11.07□□□□□ -0.64
LINC00578-204ENST00000446548 ZBTB7BO15156 539 aaPredicted RBP11.07□□□□□ -0.64
LINC00578-204ENST00000446548 GPR37O15354 613 aa11.07□□□□□ -0.64
LINC00578-204ENST00000446548 HOXB7P09629 217 aa11.07□□□□□ -0.64
LINC00578-204ENST00000446548 SLC4A3P48751 1232 aa11.07□□□□□ -0.64
LINC00578-204ENST00000446548 CCDC30Q5VVM6 783 aa11.07□□□□□ -0.64
LINC00578-204ENST00000446548 INTS3Q68E01 1043 aaKnown RBP11.07□□□□□ -0.64
LINC00578-204ENST00000446548 SLC52A2Q9HAB3 445 aa11.07□□□□□ -0.64
LINC00578-204ENST00000446548 PXDNLA1KZ92 1463 aa11.06□□□□□ -0.64
LINC00578-204ENST00000446548 C3orf80F5H4A9 247 aa11.06□□□□□ -0.64
LINC00578-204ENST00000446548 OATP04181 439 aa11.06□□□□□ -0.64
LINC00578-204ENST00000446548 BCAMP50895 628 aa11.06□□□□□ -0.64
LINC00578-204ENST00000446548 NECTIN2Q92692 538 aa11.06□□□□□ -0.64
LINC00578-204ENST00000446548 STRN4Q9NRL3 753 aa11.06□□□□□ -0.64
LINC00578-204ENST00000446548 ADGRG1Q9Y653 693 aa11.06□□□□□ -0.64
LINC00578-204ENST00000446548 IL2RBP14784 551 aa11.05□□□□□ -0.64
LINC00578-204ENST00000446548 HDAC1Q13547 482 aaPredicted RBP11.05□□□□□ -0.64
LINC00578-204ENST00000446548 HDGFL1Q5TGJ6 251 aa11.05□□□□□ -0.64
LINC00578-204ENST00000446548 SAMD7Q7Z3H4 446 aa11.05□□□□□ -0.64
LINC00578-204ENST00000446548 ZCRB1Q8TBF4 217 aaKnown RBP11.05□□□□□ -0.64
LINC00578-204ENST00000446548 DCAF5Q96JK2 942 aa11.05□□□□□ -0.64
LINC00578-204ENST00000446548 STK31Q9BXU1 1019 aa11.05□□□□□ -0.64
LINC00578-204ENST00000446548 BTG4Q9NY30 223 aa11.05□□□□□ -0.64
LINC00578-204ENST00000446548 ATP10DQ9P241 1426 aa11.05□□□□□ -0.64
LINC00578-204ENST00000446548 PCDH11XQ9BZA7 1347 aa11.05□□□□□ -0.64
LINC00578-204ENST00000446548 PCDH11YQ9BZA8 1340 aa11.05□□□□□ -0.64
LINC00578-204ENST00000446548 TOM1O60784 492 aa11.04□□□□□ -0.64
LINC00578-204ENST00000446548 HSP90AB1P08238 724 aaKnown RBP11.04□□□□□ -0.64
LINC00578-204ENST00000446548 FLIIQ13045 1269 aa11.04□□□□□ -0.64
LINC00578-204ENST00000446548 RWDD1Q9H446 243 aaPredicted RBP11.04□□□□□ -0.64
LINC00578-204ENST00000446548 RBM19Q9Y4C8 960 aaKnown RBP11.04□□□□□ -0.64
LINC00578-204ENST00000446548 LRP6O75581 1613 aa11.04□□□□□ -0.64
LINC00578-204ENST00000446548 KCPQ6ZWJ8 1503 aa11.04□□□□□ -0.64
LINC00578-204ENST00000446548 GIGYF1O75420 1035 aaPredicted RBP11.03□□□□□ -0.64
LINC00578-204ENST00000446548 DNAJB2P25686 324 aa11.03□□□□□ -0.64
LINC00578-204ENST00000446548 EVA1CP58658 441 aa11.03□□□□□ -0.64
LINC00578-204ENST00000446548 C1orf115Q9H7X2 142 aa11.03□□□□□ -0.64
LINC00578-204ENST00000446548 TSR3Q9UJK0 312 aaKnown RBP11.03□□□□□ -0.64
LINC00578-204ENST00000446548 DOT1LQ8TEK3 1739 aa11.02□□□□□ -0.65
LINC00578-204ENST00000446548 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.02□□□□□ -0.65
LINC00578-204ENST00000446548 PRAMEF22A3QJZ6 481 aa11.02□□□□□ -0.65
LINC00578-204ENST00000446548 F6X3S4 739 aa11.02□□□□□ -0.65
LINC00578-204ENST00000446548 PIP4K2BP78356 416 aa11.02□□□□□ -0.65
LINC00578-204ENST00000446548 SLC39A6Q13433 755 aa11.02□□□□□ -0.65
LINC00578-204ENST00000446548 FAM161AQ3B820 660 aa11.02□□□□□ -0.65
LINC00578-204ENST00000446548 ZNF790Q6PG37 636 aa11.02□□□□□ -0.65
LINC00578-204ENST00000446548 NYAP1Q6ZVC0 841 aa11.02□□□□□ -0.65
LINC00578-204ENST00000446548 SMC5Q8IY18 1101 aa11.02□□□□□ -0.65
LINC00578-204ENST00000446548 NFATC2IPQ8NCF5 419 aa11.02□□□□□ -0.65
LINC00578-204ENST00000446548 CHMP4BQ9H444 224 aaKnown RBP11.02□□□□□ -0.65
LINC00578-204ENST00000446548 CHPF2Q9P2E5 772 aa11.02□□□□□ -0.65
LINC00578-204ENST00000446548 PDZRN3Q9UPQ7 1066 aa11.02□□□□□ -0.65
LINC00578-204ENST00000446548 HPS5Q9UPZ3 1129 aa11.02□□□□□ -0.65
LINC00578-204ENST00000446548 SLIT2O94813 1529 aa11.02□□□□□ -0.65
LINC00578-204ENST00000446548 TNS2Q63HR2 1409 aa11.01□□□□□ -0.65
LINC00578-204ENST00000446548 ARFGEF2Q9Y6D5 1785 aa11.01□□□□□ -0.65
LINC00578-204ENST00000446548 RNF40O75150 1001 aa11.01□□□□□ -0.65
LINC00578-204ENST00000446548 EIF2S2P20042 333 aaKnown RBP11.01□□□□□ -0.65
LINC00578-204ENST00000446548 FECHP22830 423 aa11.01□□□□□ -0.65
LINC00578-204ENST00000446548 SIRT2Q8IXJ6 389 aa11.01□□□□□ -0.65
LINC00578-204ENST00000446548 PHAXQ9H814 394 aaKnown RBP11.01□□□□□ -0.65
LINC00578-204ENST00000446548 UBAP1LF5GYI3 381 aa11□□□□□ -0.65
LINC00578-204ENST00000446548 CCT4P50991 539 aaKnown RBP11□□□□□ -0.65
LINC00578-204ENST00000446548 CABP4P57796 275 aa11□□□□□ -0.65
LINC00578-204ENST00000446548 PPP4CP60510 307 aa11□□□□□ -0.65
LINC00578-204ENST00000446548 FKBP5Q13451 457 aaPredicted RBP11□□□□□ -0.65
LINC00578-204ENST00000446548 SLF2Q8IX21 1173 aa11□□□□□ -0.65
LINC00578-204ENST00000446548 MEIS3Q99687 375 aa11□□□□□ -0.65
LINC00578-204ENST00000446548 NUP188Q5SRE5 1749 aa11□□□□□ -0.65
LINC00578-204ENST00000446548 ADCY9O60503 1353 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms