RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 EPS15P42566 896 aa9.49□□□□□ -0.89
BRAFP1-201ENST00000445336 RGL3Q3MIN7 710 aa9.49□□□□□ -0.89
BRAFP1-201ENST00000445336 ZNF697Q5TEC3 545 aa9.49□□□□□ -0.89
BRAFP1-201ENST00000445336 PRPF40BQ6NWY9 871 aaKnown RBP9.49□□□□□ -0.89
BRAFP1-201ENST00000445336 RAPGEF4Q8WZA2 1011 aa9.49□□□□□ -0.89
BRAFP1-201ENST00000445336 TMOD3Q9NYL9 352 aa9.49□□□□□ -0.89
BRAFP1-201ENST00000445336 FAM50AQ14320 339 aaKnown RBP9.48□□□□□ -0.89
BRAFP1-201ENST00000445336 NFIXQ14938 502 aa9.48□□□□□ -0.89
BRAFP1-201ENST00000445336 ZPR1O75312 459 aa9.48□□□□□ -0.89
BRAFP1-201ENST00000445336 TBC1D8O95759 1140 aa9.48□□□□□ -0.89
BRAFP1-201ENST00000445336 SLC4A8Q2Y0W8 1093 aa9.48□□□□□ -0.89
BRAFP1-201ENST00000445336 PCNTO95613 3336 aa9.48□□□□□ -0.89
BRAFP1-201ENST00000445336 APLP2Q06481 763 aa9.47□□□□□ -0.89
BRAFP1-201ENST00000445336 ATG3Q9NT62 314 aa9.47□□□□□ -0.89
BRAFP1-201ENST00000445336 RAB3GAP2Q9H2M9 1393 aa9.47□□□□□ -0.89
BRAFP1-201ENST00000445336 KLRG2A4D1S0 409 aaPredicted RBP9.47□□□□□ -0.89
BRAFP1-201ENST00000445336 UNCXA6NJT0 531 aa9.47□□□□□ -0.89
BRAFP1-201ENST00000445336 A0A1W2PP64 1363 aa9.47□□□□□ -0.89
BRAFP1-201ENST00000445336 SHISA4Q96DD7 197 aa9.47□□□□□ -0.89
BRAFP1-201ENST00000445336 ZNF622Q969S3 477 aaKnown RBP eCLIP9.46□□□□□ -0.89
BRAFP1-201ENST00000445336 EFCC1Q9HA90 598 aa9.46□□□□□ -0.89
BRAFP1-201ENST00000445336 SOS1Q07889 1333 aaPredicted RBP9.46□□□□□ -0.9
BRAFP1-201ENST00000445336 IRS2Q9Y4H2 1338 aa9.46□□□□□ -0.9
BRAFP1-201ENST00000445336 SRGNP10124 158 aa9.46□□□□□ -0.9
BRAFP1-201ENST00000445336 GJA8P48165 433 aa9.46□□□□□ -0.9
BRAFP1-201ENST00000445336 BCAMP50895 628 aa9.46□□□□□ -0.9
BRAFP1-201ENST00000445336 DDX60Q8IY21 1712 aaKnown RBP9.45□□□□□ -0.9
BRAFP1-201ENST00000445336 NPR1P16066 1061 aa9.45□□□□□ -0.9
BRAFP1-201ENST00000445336 ALPK3Q96L96 1907 aa9.45□□□□□ -0.9
BRAFP1-201ENST00000445336 CARMIL3Q8ND23 1372 aa9.45□□□□□ -0.9
BRAFP1-201ENST00000445336 ERVV-2B6SEH9 535 aa9.44□□□□□ -0.9
BRAFP1-201ENST00000445336 ASB2Q96Q27 587 aa9.44□□□□□ -0.9
BRAFP1-201ENST00000445336 UHRF1Q96T88 793 aaPredicted RBP9.44□□□□□ -0.9
BRAFP1-201ENST00000445336 EVI5O60447 810 aa9.44□□□□□ -0.9
BRAFP1-201ENST00000445336 SLC9C1Q4G0N8 1177 aa9.44□□□□□ -0.9
BRAFP1-201ENST00000445336 CDX2Q99626 313 aaPredicted RBP9.44□□□□□ -0.9
BRAFP1-201ENST00000445336 A0A087WZG4 1122 aa9.43□□□□□ -0.9
BRAFP1-201ENST00000445336 CYP27B1O15528 508 aa9.43□□□□□ -0.9
BRAFP1-201ENST00000445336 GJB1P08034 283 aa9.43□□□□□ -0.9
BRAFP1-201ENST00000445336 KCTD2Q14681 263 aa9.43□□□□□ -0.9
BRAFP1-201ENST00000445336 ADAMTS19Q8TE59 1207 aa9.43□□□□□ -0.9
BRAFP1-201ENST00000445336 SRP68Q9UHB9 627 aaKnown RBP9.43□□□□□ -0.9
BRAFP1-201ENST00000445336 RIC1Q4ADV7 1423 aa9.43□□□□□ -0.9
BRAFP1-201ENST00000445336 COL3A1P02461 1466 aaPredicted RBP9.43□□□□□ -0.9
BRAFP1-201ENST00000445336 MANSC4A6NHS7 340 aaPredicted RBP9.42□□□□□ -0.9
BRAFP1-201ENST00000445336 STAP2Q9UGK3 403 aa9.42□□□□□ -0.9
BRAFP1-201ENST00000445336 SPG7Q9UQ90 795 aa9.42□□□□□ -0.9
BRAFP1-201ENST00000445336 MRPS5P82675 430 aaKnown RBP9.42□□□□□ -0.9
BRAFP1-201ENST00000445336 AKNAD1Q5T1N1 836 aa9.42□□□□□ -0.9
BRAFP1-201ENST00000445336 NHLH1Q02575 133 aa9.41□□□□□ -0.9
BRAFP1-201ENST00000445336 CRKLP46109 303 aaKnown RBP9.41□□□□□ -0.9
BRAFP1-201ENST00000445336 DPF2Q92785 391 aa9.41□□□□□ -0.9
BRAFP1-201ENST00000445336 ZNF277Q9NRM2 450 aaPredicted RBP9.41□□□□□ -0.9
BRAFP1-201ENST00000445336 USP48Q86UV5 1035 aa9.4□□□□□ -0.9
BRAFP1-201ENST00000445336 ANKLE1Q8NAG6 615 aa9.4□□□□□ -0.9
BRAFP1-201ENST00000445336 CABP1Q9NZU7 370 aa9.4□□□□□ -0.9
BRAFP1-201ENST00000445336 ASAP1Q9ULH1 1129 aa9.4□□□□□ -0.9
BRAFP1-201ENST00000445336 PRR33A8MZF0 331 aa9.4□□□□□ -0.9
BRAFP1-201ENST00000445336 ALDH1B1P30837 517 aa9.4□□□□□ -0.9
BRAFP1-201ENST00000445336 TNIP1Q15025 636 aa9.4□□□□□ -0.9
BRAFP1-201ENST00000445336 ZNF408Q9H9D4 720 aa9.4□□□□□ -0.9
BRAFP1-201ENST00000445336 THEGQ9P2T0 379 aa9.4□□□□□ -0.9
BRAFP1-201ENST00000445336 GJA3Q9Y6H8 435 aa9.4□□□□□ -0.9
BRAFP1-201ENST00000445336 COL4A5P29400 1685 aa9.4□□□□□ -0.9
BRAFP1-201ENST00000445336 PIEZO1Q92508 2521 aa9.4□□□□□ -0.9
BRAFP1-201ENST00000445336 EDC4Q6P2E9 1401 aaKnown RBP9.4□□□□□ -0.9
BRAFP1-201ENST00000445336 NPC1L1Q9UHC9 1359 aa9.4□□□□□ -0.91
BRAFP1-201ENST00000445336 FARP2O94887 1054 aaPredicted RBP9.4□□□□□ -0.91
BRAFP1-201ENST00000445336 SLC4A9Q96Q91 983 aa9.4□□□□□ -0.91
BRAFP1-201ENST00000445336 HSP90AB1P08238 724 aaKnown RBP9.39□□□□□ -0.91
BRAFP1-201ENST00000445336 ST5P78524 1137 aa9.39□□□□□ -0.91
BRAFP1-201ENST00000445336 USPL1Q5W0Q7 1092 aa9.39□□□□□ -0.91
BRAFP1-201ENST00000445336 SLC4A1APQ9BWU0 796 aaKnown RBP9.39□□□□□ -0.91
BRAFP1-201ENST00000445336 SMAD3P84022 425 aaKnown RBP9.39□□□□□ -0.91
BRAFP1-201ENST00000445336 NIM1KQ8IY84 436 aa9.39□□□□□ -0.91
BRAFP1-201ENST00000445336 KTN1Q86UP2 1357 aaKnown RBP9.38□□□□□ -0.91
BRAFP1-201ENST00000445336 HOXC9P31274 260 aa9.38□□□□□ -0.91
BRAFP1-201ENST00000445336 ACAP1Q15027 740 aa9.38□□□□□ -0.91
BRAFP1-201ENST00000445336 OTUD7BQ6GQQ9 843 aa9.38□□□□□ -0.91
BRAFP1-201ENST00000445336 SEMA6BQ9H3T3 888 aa9.38□□□□□ -0.91
BRAFP1-201ENST00000445336 SUPT20HQ8NEM7 779 aa9.38□□□□□ -0.91
BRAFP1-201ENST00000445336 COL15A1P39059 1388 aa9.38□□□□□ -0.91
BRAFP1-201ENST00000445336 RPS12P25398 132 aaKnown RBP9.37□□□□□ -0.91
BRAFP1-201ENST00000445336 PRR5LQ6MZQ0 368 aa9.37□□□□□ -0.91
BRAFP1-201ENST00000445336 INTS5Q6P9B9 1019 aaKnown RBP9.37□□□□□ -0.91
BRAFP1-201ENST00000445336 IL27Q8NEV9 243 aa9.37□□□□□ -0.91
BRAFP1-201ENST00000445336 DCPSQ96C86 337 aaKnown RBP9.37□□□□□ -0.91
BRAFP1-201ENST00000445336 KIAA0100Q14667 2235 aaKnown RBP9.37□□□□□ -0.91
BRAFP1-201ENST00000445336 WTIPA6NIX2 430 aaPredicted RBP9.37□□□□□ -0.91
BRAFP1-201ENST00000445336 H7C1D1 291 aa9.37□□□□□ -0.91
BRAFP1-201ENST00000445336 SP3Q02447 781 aa9.37□□□□□ -0.91
BRAFP1-201ENST00000445336 KRT26Q7Z3Y9 468 aa9.37□□□□□ -0.91
BRAFP1-201ENST00000445336 BCL2L12Q9HB09 334 aa9.37□□□□□ -0.91
BRAFP1-201ENST00000445336 GOLGB1Q14789 3259 aaKnown RBP9.36□□□□□ -0.91
BRAFP1-201ENST00000445336 PRRX2Q99811 253 aa9.36□□□□□ -0.91
BRAFP1-201ENST00000445336 FOSL2P15408 326 aa9.36□□□□□ -0.91
BRAFP1-201ENST00000445336 HIRAP54198 1017 aaPredicted RBP9.36□□□□□ -0.91
BRAFP1-201ENST00000445336 AAK1Q2M2I8 961 aa9.35□□□□□ -0.91
BRAFP1-201ENST00000445336 DUOX1Q9NRD9 1551 aa9.35□□□□□ -0.91
BRAFP1-201ENST00000445336 ZBTB48P10074 688 aaPredicted RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms