RNA–Protein interactions for RNA: ENST00000437169.5

NCSTN-207, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 448 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-207ENST00000437169 GIGYF2Q6Y7W6 1299 aaKnown RBP24.68■■□□□ 1.54
NCSTN-207ENST00000437169 LDHDQ86WU2 507 aa24.68■■□□□ 1.54
NCSTN-207ENST00000437169 CREBZFQ9NS37 354 aa24.68■■□□□ 1.54
NCSTN-207ENST00000437169 LTBP1Q14766 1721 aa24.67■■□□□ 1.54
NCSTN-207ENST00000437169 C3orf67Q6ZVT6 689 aa24.67■■□□□ 1.54
NCSTN-207ENST00000437169 TSPYL4Q9UJ04 414 aa24.66■■□□□ 1.54
NCSTN-207ENST00000437169 ITGBL1O95965 494 aaPredicted RBP24.65■■□□□ 1.54
NCSTN-207ENST00000437169 HSPA1AP0DMV8 641 aaKnown RBP24.65■■□□□ 1.54
NCSTN-207ENST00000437169 HSPA1BP0DMV9 641 aaKnown RBP24.65■■□□□ 1.54
NCSTN-207ENST00000437169 RIPK4P57078 832 aa24.65■■□□□ 1.54
NCSTN-207ENST00000437169 PROSER3Q2NL68 480 aa24.65■■□□□ 1.54
NCSTN-207ENST00000437169 BABAM1Q9NWV8 329 aa24.65■■□□□ 1.54
NCSTN-207ENST00000437169 TMPOP42166 694 aaKnown RBP24.64■■□□□ 1.54
NCSTN-207ENST00000437169 RALBP1Q15311 655 aa24.64■■□□□ 1.54
NCSTN-207ENST00000437169 CC2D2BQ6DHV5 1058 aa24.64■■□□□ 1.54
NCSTN-207ENST00000437169 CRAMP1Q96RY5 1269 aa24.64■■□□□ 1.54
NCSTN-207ENST00000437169 HACL1Q9UJ83 578 aa24.63■■□□□ 1.53
NCSTN-207ENST00000437169 ANXA1P04083 346 aa24.61■■□□□ 1.53
NCSTN-207ENST00000437169 EPHX2P34913 555 aa24.61■■□□□ 1.53
NCSTN-207ENST00000437169 SLC10A5Q5PT55 438 aa24.61■■□□□ 1.53
NCSTN-207ENST00000437169 GPC2Q8N158 579 aa24.61■■□□□ 1.53
NCSTN-207ENST00000437169 RPGRQ92834 1020 aaKnown RBP24.61■■□□□ 1.53
NCSTN-207ENST00000437169 RNF123Q5XPI4 1314 aa24.61■■□□□ 1.53
NCSTN-207ENST00000437169 CNTNAP1P78357 1384 aa24.6■■□□□ 1.53
NCSTN-207ENST00000437169 PARP10Q53GL7 1025 aa24.6■■□□□ 1.53
NCSTN-207ENST00000437169 MKRN1Q9UHC7 482 aaKnown RBP24.6■■□□□ 1.53
NCSTN-207ENST00000437169 EIF2S2P20042 333 aaKnown RBP24.59■■□□□ 1.53
NCSTN-207ENST00000437169 PPP1R42Q7Z4L9 355 aa24.59■■□□□ 1.53
NCSTN-207ENST00000437169 RBM17Q96I25 401 aaKnown RBP24.59■■□□□ 1.53
NCSTN-207ENST00000437169 TAF1P21675 1872 aa24.59■■□□□ 1.53
NCSTN-207ENST00000437169 GRIPAP1Q4V328 841 aa24.58■■□□□ 1.53
NCSTN-207ENST00000437169 PPEF1O14829 653 aaPredicted RBP24.57■■□□□ 1.52
NCSTN-207ENST00000437169 EAPPQ56P03 285 aaPredicted RBP24.57■■□□□ 1.52
NCSTN-207ENST00000437169 CHL1O00533 1208 aa24.56■■□□□ 1.52
NCSTN-207ENST00000437169 JDP2Q8WYK2 163 aa24.56■■□□□ 1.52
NCSTN-207ENST00000437169 UTP14AQ9BVJ6 771 aaKnown RBP24.56■■□□□ 1.52
NCSTN-207ENST00000437169 TRIM35Q9UPQ4 493 aa24.56■■□□□ 1.52
NCSTN-207ENST00000437169 DDX60Q8IY21 1712 aaKnown RBP24.55■■□□□ 1.52
NCSTN-207ENST00000437169 LMOD3Q0VAK6 560 aa24.55■■□□□ 1.52
NCSTN-207ENST00000437169 KRT24Q2M2I5 525 aa24.55■■□□□ 1.52
NCSTN-207ENST00000437169 COPS6Q7L5N1 327 aa24.55■■□□□ 1.52
NCSTN-207ENST00000437169 PNMA8AQ86V59 439 aaPredicted RBP24.55■■□□□ 1.52
NCSTN-207ENST00000437169 NLRP3Q96P20 1036 aa24.55■■□□□ 1.52
NCSTN-207ENST00000437169 MYBBP1AQ9BQG0 1328 aaKnown RBP24.55■■□□□ 1.52
NCSTN-207ENST00000437169 TMEM88BA6NKF7 163 aa24.54■■□□□ 1.52
NCSTN-207ENST00000437169 SCNN1DP51172 638 aa24.54■■□□□ 1.52
NCSTN-207ENST00000437169 NLRP10Q86W26 655 aa24.54■■□□□ 1.52
NCSTN-207ENST00000437169 CCDC146Q8IYE0 955 aa24.54■■□□□ 1.52
NCSTN-207ENST00000437169 XAGE3Q8WTP9 111 aa24.54■■□□□ 1.52
NCSTN-207ENST00000437169 ATP6V0A2Q9Y487 856 aa24.54■■□□□ 1.52
NCSTN-207ENST00000437169 ABCC4O15439 1325 aa24.54■■□□□ 1.52
NCSTN-207ENST00000437169 MAP1SQ66K74 1059 aaPredicted RBP24.53■■□□□ 1.52
NCSTN-207ENST00000437169 TNS4Q8IZW8 715 aa24.53■■□□□ 1.52
NCSTN-207ENST00000437169 CNTROBQ8N137 903 aa24.53■■□□□ 1.52
NCSTN-207ENST00000437169 TRPM7Q96QT4 1865 aa24.53■■□□□ 1.52
NCSTN-207ENST00000437169 TCERG1O14776 1098 aaKnown RBP24.52■■□□□ 1.52
NCSTN-207ENST00000437169 EIF6P56537 245 aaKnown RBP24.52■■□□□ 1.52
NCSTN-207ENST00000437169 LARGE2Q8N3Y3 721 aa24.52■■□□□ 1.52
NCSTN-207ENST00000437169 NECTIN2Q92692 538 aa24.52■■□□□ 1.52
NCSTN-207ENST00000437169 RTFDC1Q9BY42 306 aaPredicted RBP24.52■■□□□ 1.52
NCSTN-207ENST00000437169 DDX21Q9NR30 783 aaKnown RBP eCLIP24.52■■□□□ 1.52
NCSTN-207ENST00000437169 LRRC37AA6NMS7 1700 aa24.52■■□□□ 1.52
NCSTN-207ENST00000437169 VEGFBP49765 207 aa24.51■■□□□ 1.51
NCSTN-207ENST00000437169 DDX10Q13206 875 aaKnown RBP24.51■■□□□ 1.51
NCSTN-207ENST00000437169 TCIRG1Q13488 830 aa24.51■■□□□ 1.51
NCSTN-207ENST00000437169 CLEC11AQ9Y240 323 aa24.51■■□□□ 1.51
NCSTN-207ENST00000437169 GJA3Q9Y6H8 435 aa24.51■■□□□ 1.51
NCSTN-207ENST00000437169 EPS15P42566 896 aa24.5■■□□□ 1.51
NCSTN-207ENST00000437169 HSP90AB3PQ58FF7 597 aa24.5■■□□□ 1.51
NCSTN-207ENST00000437169 VPS33BQ9H267 617 aa24.5■■□□□ 1.51
NCSTN-207ENST00000437169 DUOX1Q9NRD9 1551 aa24.5■■□□□ 1.51
NCSTN-207ENST00000437169 HCLS1P14317 486 aaPredicted RBP24.49■■□□□ 1.51
NCSTN-207ENST00000437169 AIMP1Q12904 312 aaKnown RBP24.49■■□□□ 1.51
NCSTN-207ENST00000437169 NEUROD2Q15784 382 aa24.49■■□□□ 1.51
NCSTN-207ENST00000437169 RUNDC1Q96C34 613 aa24.49■■□□□ 1.51
NCSTN-207ENST00000437169 RASSF10A6NK89 507 aa24.48■■□□□ 1.51
NCSTN-207ENST00000437169 FOXN1O15353 648 aa24.48■■□□□ 1.51
NCSTN-207ENST00000437169 AOC3Q16853 763 aa24.48■■□□□ 1.51
NCSTN-207ENST00000437169 COL4A1P02462 1669 aa24.47■■□□□ 1.51
NCSTN-207ENST00000437169 PPIP5K2O43314 1243 aa24.47■■□□□ 1.51
NCSTN-207ENST00000437169 SP8Q8IXZ3 490 aa24.47■■□□□ 1.51
NCSTN-207ENST00000437169 NIM1KQ8IY84 436 aa24.47■■□□□ 1.51
NCSTN-207ENST00000437169 CHPF2Q9P2E5 772 aa24.47■■□□□ 1.51
NCSTN-207ENST00000437169 ADAMTS8Q9UP79 889 aa24.47■■□□□ 1.51
NCSTN-207ENST00000437169 BBOX1O75936 387 aa24.46■■□□□ 1.51
NCSTN-207ENST00000437169 THSD7BQ9C0I4 1608 aa24.46■■□□□ 1.51
NCSTN-207ENST00000437169 SH3TC1Q8TE82 1336 aa24.45■■□□□ 1.5
NCSTN-207ENST00000437169 HOXB7P09629 217 aa24.45■■□□□ 1.5
NCSTN-207ENST00000437169 FMR1Q06787 632 aaKnown RBP eCLIP24.45■■□□□ 1.5
NCSTN-207ENST00000437169 CXCL9Q07325 125 aa24.45■■□□□ 1.5
NCSTN-207ENST00000437169 LMOD1P29536 600 aaPredicted RBP24.44■■□□□ 1.5
NCSTN-207ENST00000437169 ISCA1Q9BUE6 129 aa24.44■■□□□ 1.5
NCSTN-207ENST00000437169 TRMT112Q9UI30 125 aaKnown RBP24.44■■□□□ 1.5
NCSTN-207ENST00000437169 GRAPQ13588 217 aa24.43■■□□□ 1.5
NCSTN-207ENST00000437169 USP50Q70EL3 339 aaPredicted RBP24.43■■□□□ 1.5
NCSTN-207ENST00000437169 PLBD2Q8NHP8 589 aa24.43■■□□□ 1.5
NCSTN-207ENST00000437169 GRAPLQ8TC17 118 aaPredicted RBP24.43■■□□□ 1.5
NCSTN-207ENST00000437169 WBP1LQ9NX94 342 aa24.43■■□□□ 1.5
NCSTN-207ENST00000437169 GPRC5DQ9NZD1 345 aa24.43■■□□□ 1.5
NCSTN-207ENST00000437169 ZNRF3Q9ULT6 936 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms