RNA–Protein interactions for RNA: ENST00000436754.5

PDLIM2-211, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-211ENST00000436754 LDHDQ86WU2 507 aa14.32□□□□□ -0.12
PDLIM2-211ENST00000436754 SYNE4Q8N205 404 aa14.32□□□□□ -0.12
PDLIM2-211ENST00000436754 NGEFQ8N5V2 710 aa14.32□□□□□ -0.12
PDLIM2-211ENST00000436754 ZNF277Q9NRM2 450 aaPredicted RBP14.32□□□□□ -0.12
PDLIM2-211ENST00000436754 SNED1Q8TER0 1413 aa14.32□□□□□ -0.12
PDLIM2-211ENST00000436754 NUP98P52948 1817 aa14.31□□□□□ -0.12
PDLIM2-211ENST00000436754 CHL1O00533 1208 aa14.31□□□□□ -0.12
PDLIM2-211ENST00000436754 POTEIP0CG38 1075 aa14.31□□□□□ -0.12
PDLIM2-211ENST00000436754 POTEJP0CG39 1038 aa14.31□□□□□ -0.12
PDLIM2-211ENST00000436754 MYL6BP14649 208 aa14.31□□□□□ -0.12
PDLIM2-211ENST00000436754 EIF2S2P20042 333 aaKnown RBP14.31□□□□□ -0.12
PDLIM2-211ENST00000436754 SUSD4Q5VX71 490 aa14.31□□□□□ -0.12
PDLIM2-211ENST00000436754 NUTM1Q86Y26 1132 aa14.31□□□□□ -0.12
PDLIM2-211ENST00000436754 CRAMP1Q96RY5 1269 aa14.31□□□□□ -0.12
PDLIM2-211ENST00000436754 PASKQ96RG2 1323 aa14.31□□□□□ -0.12
PDLIM2-211ENST00000436754 PDIA6Q15084 440 aa14.3□□□□□ -0.12
PDLIM2-211ENST00000436754 PARP10Q53GL7 1025 aa14.3□□□□□ -0.12
PDLIM2-211ENST00000436754 SLC10A5Q5PT55 438 aa14.3□□□□□ -0.12
PDLIM2-211ENST00000436754 OLFM4Q6UX06 510 aa14.3□□□□□ -0.12
PDLIM2-211ENST00000436754 LRP10Q7Z4F1 713 aa14.3□□□□□ -0.12
PDLIM2-211ENST00000436754 PNMA8AQ86V59 439 aaPredicted RBP14.3□□□□□ -0.12
PDLIM2-211ENST00000436754 UBN2Q6ZU65 1347 aa14.3□□□□□ -0.12
PDLIM2-211ENST00000436754 ITGBL1O95965 494 aaPredicted RBP14.29□□□□□ -0.12
PDLIM2-211ENST00000436754 CALD1Q05682 793 aaKnown RBP14.29□□□□□ -0.12
PDLIM2-211ENST00000436754 PPP1R42Q7Z4L9 355 aa14.29□□□□□ -0.12
PDLIM2-211ENST00000436754 GPC2Q8N158 579 aa14.29□□□□□ -0.12
PDLIM2-211ENST00000436754 ZBTB3Q9H5J0 574 aa14.29□□□□□ -0.12
PDLIM2-211ENST00000436754 HACL1Q9UJ83 578 aa14.29□□□□□ -0.12
PDLIM2-211ENST00000436754 ZNF541Q9H0D2 1346 aa14.29□□□□□ -0.12
PDLIM2-211ENST00000436754 ABCC12Q96J65 1359 aa14.29□□□□□ -0.12
PDLIM2-211ENST00000436754 NTSR2O95665 410 aa14.28□□□□□ -0.12
PDLIM2-211ENST00000436754 HSPA1AP0DMV8 641 aaKnown RBP14.28□□□□□ -0.12
PDLIM2-211ENST00000436754 HSPA1BP0DMV9 641 aaKnown RBP14.28□□□□□ -0.12
PDLIM2-211ENST00000436754 KRT24Q2M2I5 525 aa14.28□□□□□ -0.12
PDLIM2-211ENST00000436754 JDP2Q8WYK2 163 aa14.28□□□□□ -0.12
PDLIM2-211ENST00000436754 NECTIN2Q92692 538 aa14.28□□□□□ -0.12
PDLIM2-211ENST00000436754 RPGRQ92834 1020 aaKnown RBP14.28□□□□□ -0.12
PDLIM2-211ENST00000436754 RBM17Q96I25 401 aaKnown RBP14.28□□□□□ -0.12
PDLIM2-211ENST00000436754 CFAP44Q96MT7 982 aa14.28□□□□□ -0.12
PDLIM2-211ENST00000436754 VPS33BQ9H267 617 aa14.28□□□□□ -0.12
PDLIM2-211ENST00000436754 GPTP24298 496 aa14.27□□□□□ -0.13
PDLIM2-211ENST00000436754 EPHX2P34913 555 aa14.27□□□□□ -0.13
PDLIM2-211ENST00000436754 NLRP3Q96P20 1036 aa14.27□□□□□ -0.13
PDLIM2-211ENST00000436754 MBIPQ9NS73 344 aa14.27□□□□□ -0.13
PDLIM2-211ENST00000436754 IFT57Q9NWB7 429 aa14.27□□□□□ -0.13
PDLIM2-211ENST00000436754 RNF123Q5XPI4 1314 aa14.26□□□□□ -0.13
PDLIM2-211ENST00000436754 ANXA1P04083 346 aa14.26□□□□□ -0.13
PDLIM2-211ENST00000436754 GNAI1P63096 354 aa14.26□□□□□ -0.13
PDLIM2-211ENST00000436754 PROSER3Q2NL68 480 aa14.26□□□□□ -0.13
PDLIM2-211ENST00000436754 TMEM88BA6NKF7 163 aa14.25□□□□□ -0.13
PDLIM2-211ENST00000436754 EIF6P56537 245 aaKnown RBP14.25□□□□□ -0.13
PDLIM2-211ENST00000436754 UTP14AQ9BVJ6 771 aaKnown RBP14.25□□□□□ -0.13
PDLIM2-211ENST00000436754 ADAMTSL1Q8N6G6 1762 aa14.24□□□□□ -0.13
PDLIM2-211ENST00000436754 CNTNAP1P78357 1384 aa14.24□□□□□ -0.13
PDLIM2-211ENST00000436754 PPEF1O14829 653 aaPredicted RBP14.24□□□□□ -0.13
PDLIM2-211ENST00000436754 HOXB7P09629 217 aa14.24□□□□□ -0.13
PDLIM2-211ENST00000436754 ZNF853P0CG23 659 aa14.24□□□□□ -0.13
PDLIM2-211ENST00000436754 EAPPQ56P03 285 aaPredicted RBP14.24□□□□□ -0.13
PDLIM2-211ENST00000436754 HSP90AB3PQ58FF7 597 aa14.24□□□□□ -0.13
PDLIM2-211ENST00000436754 HDGFL1Q5TGJ6 251 aa14.24□□□□□ -0.13
PDLIM2-211ENST00000436754 TNS4Q8IZW8 715 aa14.24□□□□□ -0.13
PDLIM2-211ENST00000436754 CNTROBQ8N137 903 aa14.24□□□□□ -0.13
PDLIM2-211ENST00000436754 MKRN1Q9UHC7 482 aaKnown RBP14.24□□□□□ -0.13
PDLIM2-211ENST00000436754 CLEC11AQ9Y240 323 aa14.24□□□□□ -0.13
PDLIM2-211ENST00000436754 ATP6V0A2Q9Y487 856 aa14.24□□□□□ -0.13
PDLIM2-211ENST00000436754 PCNTO95613 3336 aa14.23□□□□□ -0.13
PDLIM2-211ENST00000436754 BBOX1O75936 387 aa14.23□□□□□ -0.13
PDLIM2-211ENST00000436754 DUSP27Q5VZP5 1158 aa14.23□□□□□ -0.13
PDLIM2-211ENST00000436754 C3orf67Q6ZVT6 689 aa14.23□□□□□ -0.13
PDLIM2-211ENST00000436754 COPS6Q7L5N1 327 aa14.23□□□□□ -0.13
PDLIM2-211ENST00000436754 FAM9BQ8IZU0 186 aa14.23□□□□□ -0.13
PDLIM2-211ENST00000436754 TMX4Q9H1E5 349 aaPredicted RBP14.23□□□□□ -0.13
PDLIM2-211ENST00000436754 CHPF2Q9P2E5 772 aa14.23□□□□□ -0.13
PDLIM2-211ENST00000436754 AIMP1Q12904 312 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-211ENST00000436754 TCIRG1Q13488 830 aa14.22□□□□□ -0.13
PDLIM2-211ENST00000436754 SP8Q8IXZ3 490 aa14.22□□□□□ -0.13
PDLIM2-211ENST00000436754 LARGE2Q8N3Y3 721 aa14.22□□□□□ -0.13
PDLIM2-211ENST00000436754 XAGE3Q8WTP9 111 aa14.22□□□□□ -0.13
PDLIM2-211ENST00000436754 RTFDC1Q9BY42 306 aaPredicted RBP14.22□□□□□ -0.13
PDLIM2-211ENST00000436754 DDX21Q9NR30 783 aaKnown RBP eCLIP14.22□□□□□ -0.13
PDLIM2-211ENST00000436754 ANKRD36CQ5JPF3 1778 aa14.22□□□□□ -0.13
PDLIM2-211ENST00000436754 COL4A5P29400 1685 aa14.21□□□□□ -0.13
PDLIM2-211ENST00000436754 CCDC27Q2M243 656 aa14.21□□□□□ -0.13
PDLIM2-211ENST00000436754 USP50Q70EL3 339 aaPredicted RBP14.21□□□□□ -0.13
PDLIM2-211ENST00000436754 NLRP10Q86W26 655 aa14.21□□□□□ -0.13
PDLIM2-211ENST00000436754 WWC1Q8IX03 1113 aa14.21□□□□□ -0.13
PDLIM2-211ENST00000436754 SUPT20HQ8NEM7 779 aa14.21□□□□□ -0.13
PDLIM2-211ENST00000436754 SALL2Q9Y467 1007 aaPredicted RBP14.21□□□□□ -0.13
PDLIM2-211ENST00000436754 RASSF10A6NK89 507 aa14.2□□□□□ -0.14
PDLIM2-211ENST00000436754 ELL2O00472 640 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-211ENST00000436754 LMOD1P29536 600 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-211ENST00000436754 VEGFBP49765 207 aa14.2□□□□□ -0.14
PDLIM2-211ENST00000436754 SCNN1DP51172 638 aa14.2□□□□□ -0.14
PDLIM2-211ENST00000436754 MAP1SQ66K74 1059 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-211ENST00000436754 NIM1KQ8IY84 436 aa14.2□□□□□ -0.14
PDLIM2-211ENST00000436754 TSR2Q969E8 191 aaKnown RBP14.2□□□□□ -0.14
PDLIM2-211ENST00000436754 DBF4Q9UBU7 674 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-211ENST00000436754 GJA3Q9Y6H8 435 aa14.2□□□□□ -0.14
PDLIM2-211ENST00000436754 ABCC4O15439 1325 aa14.19□□□□□ -0.14
PDLIM2-211ENST00000436754 EPS15P42566 896 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms