RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 POTEIP0CG38 1075 aa14.14□□□□□ -0.15
HMGCL-204ENST00000436439 POTEJP0CG39 1038 aa14.14□□□□□ -0.15
HMGCL-204ENST00000436439 CALD1Q05682 793 aaKnown RBP14.14□□□□□ -0.15
HMGCL-204ENST00000436439 CCDC93Q567U6 631 aa14.14□□□□□ -0.15
HMGCL-204ENST00000436439 SOGA3Q5TF21 947 aa14.14□□□□□ -0.15
HMGCL-204ENST00000436439 ZBTB3Q9H5J0 574 aa14.14□□□□□ -0.15
HMGCL-204ENST00000436439 ANKRD36CQ5JPF3 1778 aa14.14□□□□□ -0.15
HMGCL-204ENST00000436439 SNED1Q8TER0 1413 aa14.14□□□□□ -0.15
HMGCL-204ENST00000436439 LAMB2P55268 1798 aa14.13□□□□□ -0.15
HMGCL-204ENST00000436439 NEFLP07196 543 aa14.13□□□□□ -0.15
HMGCL-204ENST00000436439 GPTP24298 496 aa14.13□□□□□ -0.15
HMGCL-204ENST00000436439 JMYQ8N9B5 988 aa14.13□□□□□ -0.15
HMGCL-204ENST00000436439 GTF2E1P29083 439 aaPredicted RBP14.12□□□□□ -0.15
HMGCL-204ENST00000436439 FKBP4Q02790 459 aaKnown RBP eCLIP14.12□□□□□ -0.15
HMGCL-204ENST00000436439 LRP10Q7Z4F1 713 aa14.12□□□□□ -0.15
HMGCL-204ENST00000436439 SLC51AQ86UW1 340 aa14.12□□□□□ -0.15
HMGCL-204ENST00000436439 ZNF277Q9NRM2 450 aaPredicted RBP14.12□□□□□ -0.15
HMGCL-204ENST00000436439 TSPYL4Q9UJ04 414 aa14.12□□□□□ -0.15
HMGCL-204ENST00000436439 PDIA6Q15084 440 aa14.11□□□□□ -0.15
HMGCL-204ENST00000436439 CRY2Q49AN0 593 aa14.11□□□□□ -0.15
HMGCL-204ENST00000436439 SUSD4Q5VX71 490 aa14.11□□□□□ -0.15
HMGCL-204ENST00000436439 KIF6Q6ZMV9 814 aa14.11□□□□□ -0.15
HMGCL-204ENST00000436439 SPINK5Q9NQ38 1064 aaPredicted RBP14.11□□□□□ -0.15
HMGCL-204ENST00000436439 COL4A5P29400 1685 aa14.11□□□□□ -0.15
HMGCL-204ENST00000436439 ZNF541Q9H0D2 1346 aa14.11□□□□□ -0.15
HMGCL-204ENST00000436439 RIC1Q4ADV7 1423 aa14.1□□□□□ -0.15
HMGCL-204ENST00000436439 ANXA1P04083 346 aa14.1□□□□□ -0.15
HMGCL-204ENST00000436439 EIF2S2P20042 333 aaKnown RBP14.1□□□□□ -0.15
HMGCL-204ENST00000436439 ALDH1B1P30837 517 aa14.1□□□□□ -0.15
HMGCL-204ENST00000436439 PROSER3Q2NL68 480 aa14.1□□□□□ -0.15
HMGCL-204ENST00000436439 GIGYF2Q6Y7W6 1299 aaKnown RBP14.1□□□□□ -0.15
HMGCL-204ENST00000436439 ZNF34Q8IZ26 560 aa14.1□□□□□ -0.15
HMGCL-204ENST00000436439 NYXQ9GZU5 481 aa14.1□□□□□ -0.15
HMGCL-204ENST00000436439 MYH16Q9H6N6 1097 aa14.1□□□□□ -0.15
HMGCL-204ENST00000436439 IBTKQ9P2D0 1353 aaPredicted RBP14.1□□□□□ -0.15
HMGCL-204ENST00000436439 ADAMTSL1Q8N6G6 1762 aa14.1□□□□□ -0.15
HMGCL-204ENST00000436439 ERBB4Q15303 1308 aa14.1□□□□□ -0.15
HMGCL-204ENST00000436439 NTSR2O95665 410 aa14.09□□□□□ -0.15
HMGCL-204ENST00000436439 C3orf67Q6ZVT6 689 aa14.09□□□□□ -0.15
HMGCL-204ENST00000436439 TAF1P21675 1872 aa14.09□□□□□ -0.15
HMGCL-204ENST00000436439 ZNF853P0CG23 659 aa14.09□□□□□ -0.15
HMGCL-204ENST00000436439 RTKN2Q8IZC4 609 aa14.09□□□□□ -0.15
HMGCL-204ENST00000436439 SYNE4Q8N205 404 aa14.09□□□□□ -0.15
HMGCL-204ENST00000436439 L3MBTL3Q96JM7 780 aaPredicted RBP14.09□□□□□ -0.15
HMGCL-204ENST00000436439 IFT57Q9NWB7 429 aa14.09□□□□□ -0.15
HMGCL-204ENST00000436439 PCNTO95613 3336 aa14.08□□□□□ -0.15
HMGCL-204ENST00000436439 IARSP41252 1262 aaKnown RBP14.08□□□□□ -0.16
HMGCL-204ENST00000436439 GNAI1P63096 354 aa14.08□□□□□ -0.16
HMGCL-204ENST00000436439 KRT24Q2M2I5 525 aa14.08□□□□□ -0.16
HMGCL-204ENST00000436439 CHADLQ6NUI6 762 aa14.08□□□□□ -0.16
HMGCL-204ENST00000436439 NECTIN2Q92692 538 aa14.08□□□□□ -0.16
HMGCL-204ENST00000436439 CFAP44Q96MT7 982 aa14.08□□□□□ -0.16
HMGCL-204ENST00000436439 LTBP1Q14766 1721 aa14.07□□□□□ -0.16
HMGCL-204ENST00000436439 FZD9O00144 591 aa14.07□□□□□ -0.16
HMGCL-204ENST00000436439 HOXA10P31260 410 aaPredicted RBP14.07□□□□□ -0.16
HMGCL-204ENST00000436439 RPGRQ92834 1020 aaKnown RBP14.07□□□□□ -0.16
HMGCL-204ENST00000436439 TAF1DQ9H5J8 278 aaPredicted RBP14.07□□□□□ -0.16
HMGCL-204ENST00000436439 CT47B1P0C2W7 299 aaPredicted RBP14.06□□□□□ -0.16
HMGCL-204ENST00000436439 PSMD1Q99460 953 aa14.06□□□□□ -0.16
HMGCL-204ENST00000436439 BABAM1Q9NWV8 329 aa14.06□□□□□ -0.16
HMGCL-204ENST00000436439 RNF123Q5XPI4 1314 aa14.05□□□□□ -0.16
HMGCL-204ENST00000436439 FANCIQ9NVI1 1328 aa14.05□□□□□ -0.16
HMGCL-204ENST00000436439 DDX60Q8IY21 1712 aaKnown RBP14.05□□□□□ -0.16
HMGCL-204ENST00000436439 IQCA1LA6NCM1 817 aa14.05□□□□□ -0.16
HMGCL-204ENST00000436439 TCERG1O14776 1098 aaKnown RBP14.05□□□□□ -0.16
HMGCL-204ENST00000436439 COL13A1Q5TAT6 717 aaPredicted RBP14.05□□□□□ -0.16
HMGCL-204ENST00000436439 PPP1R42Q7Z4L9 355 aa14.05□□□□□ -0.16
HMGCL-204ENST00000436439 CHL1O00533 1208 aa14.04□□□□□ -0.16
HMGCL-204ENST00000436439 PPEF1O14829 653 aaPredicted RBP14.04□□□□□ -0.16
HMGCL-204ENST00000436439 AIMP1Q12904 312 aaKnown RBP14.04□□□□□ -0.16
HMGCL-204ENST00000436439 PARP10Q53GL7 1025 aa14.04□□□□□ -0.16
HMGCL-204ENST00000436439 COPS6Q7L5N1 327 aa14.04□□□□□ -0.16
HMGCL-204ENST00000436439 LDHDQ86WU2 507 aa14.04□□□□□ -0.16
HMGCL-204ENST00000436439 XAGE3Q8WTP9 111 aa14.04□□□□□ -0.16
HMGCL-204ENST00000436439 RBM17Q96I25 401 aaKnown RBP14.04□□□□□ -0.16
HMGCL-204ENST00000436439 CRAMP1Q96RY5 1269 aa14.04□□□□□ -0.16
HMGCL-204ENST00000436439 RCAN3Q9UKA8 241 aa14.04□□□□□ -0.16
HMGCL-204ENST00000436439 PASKQ96RG2 1323 aa14.04□□□□□ -0.16
HMGCL-204ENST00000436439 EAPPQ56P03 285 aaPredicted RBP14.03□□□□□ -0.16
HMGCL-204ENST00000436439 CC2D2BQ6DHV5 1058 aa14.03□□□□□ -0.16
HMGCL-204ENST00000436439 UTP14AQ9BVJ6 771 aaKnown RBP14.03□□□□□ -0.16
HMGCL-204ENST00000436439 CREBZFQ9NS37 354 aa14.03□□□□□ -0.16
HMGCL-204ENST00000436439 HACL1Q9UJ83 578 aa14.03□□□□□ -0.16
HMGCL-204ENST00000436439 LAS1LQ9Y4W2 734 aaKnown RBP14.03□□□□□ -0.16
HMGCL-204ENST00000436439 ITGBL1O95965 494 aaPredicted RBP14.02□□□□□ -0.17
HMGCL-204ENST00000436439 HSPA1AP0DMV8 641 aaKnown RBP14.02□□□□□ -0.17
HMGCL-204ENST00000436439 HSPA1BP0DMV9 641 aaKnown RBP14.02□□□□□ -0.17
HMGCL-204ENST00000436439 EPHX2P34913 555 aa14.02□□□□□ -0.17
HMGCL-204ENST00000436439 SLC10A5Q5PT55 438 aa14.02□□□□□ -0.17
HMGCL-204ENST00000436439 ZNF428Q96B54 188 aa14.02□□□□□ -0.17
HMGCL-204ENST00000436439 NLRP3Q96P20 1036 aa14.02□□□□□ -0.17
HMGCL-204ENST00000436439 MKRN1Q9UHC7 482 aaKnown RBP14.02□□□□□ -0.17
HMGCL-204ENST00000436439 CACNA1FO60840 1977 aa14.02□□□□□ -0.17
HMGCL-204ENST00000436439 ABCC4O15439 1325 aa14.02□□□□□ -0.17
HMGCL-204ENST00000436439 ERICH6BQ5W0A0 696 aa14.01□□□□□ -0.17
HMGCL-204ENST00000436439 NLRP10Q86W26 655 aa14.01□□□□□ -0.17
HMGCL-204ENST00000436439 GPC2Q8N158 579 aa14.01□□□□□ -0.17
HMGCL-204ENST00000436439 JDP2Q8WYK2 163 aa14.01□□□□□ -0.17
HMGCL-204ENST00000436439 TSR2Q969E8 191 aaKnown RBP14.01□□□□□ -0.17
HMGCL-204ENST00000436439 DDX21Q9NR30 783 aaKnown RBP eCLIP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms