RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 TPCN1Q9ULQ1 816 aa16.18■□□□□ 0.18
SGMS1-203ENST00000429490 FLT4P35916 1363 aa16.17■□□□□ 0.18
SGMS1-203ENST00000429490 RGS12O14924 1447 aa16.17■□□□□ 0.18
SGMS1-203ENST00000429490 ATP10DQ9P241 1426 aa16.17■□□□□ 0.18
SGMS1-203ENST00000429490 PDILTQ8N807 584 aa16.17■□□□□ 0.18
SGMS1-203ENST00000429490 LSG1Q9H089 658 aaKnown RBP16.17■□□□□ 0.18
SGMS1-203ENST00000429490 POLR3DP05423 398 aaPredicted RBP16.17■□□□□ 0.18
SGMS1-203ENST00000429490 CCAR1Q8IX12 1150 aaKnown RBP16.17■□□□□ 0.18
SGMS1-203ENST00000429490 FSIP1Q8NA03 581 aa16.17■□□□□ 0.18
SGMS1-203ENST00000429490 MNS1Q8NEH6 495 aa16.17■□□□□ 0.18
SGMS1-203ENST00000429490 HYPKQ9NX55 129 aa16.17■□□□□ 0.18
SGMS1-203ENST00000429490 ADGRB1O14514 1584 aa16.16■□□□□ 0.18
SGMS1-203ENST00000429490 UHRF1BP1LA0JNW5 1464 aa16.16■□□□□ 0.18
SGMS1-203ENST00000429490 NEK1Q96PY6 1258 aa16.16■□□□□ 0.18
SGMS1-203ENST00000429490 ABCC3O15438 1527 aa16.16■□□□□ 0.18
SGMS1-203ENST00000429490 CFAP74Q9C0B2 1584 aa16.16■□□□□ 0.18
SGMS1-203ENST00000429490 SKILP12757 684 aa16.16■□□□□ 0.18
SGMS1-203ENST00000429490 CEP57L1Q8IYX8 460 aa16.16■□□□□ 0.18
SGMS1-203ENST00000429490 NAT10Q9H0A0 1025 aaKnown RBP16.16■□□□□ 0.18
SGMS1-203ENST00000429490 TMX1Q9H3N1 280 aa16.16■□□□□ 0.18
SGMS1-203ENST00000429490 USP16Q9Y5T5 823 aa16.16■□□□□ 0.18
SGMS1-203ENST00000429490 CEP135Q66GS9 1140 aa16.15■□□□□ 0.18
SGMS1-203ENST00000429490 Q6ZUG5 572 aa16.15■□□□□ 0.18
SGMS1-203ENST00000429490 STAP2Q9UGK3 403 aa16.15■□□□□ 0.18
SGMS1-203ENST00000429490 SHPRHQ149N8 1683 aa16.15■□□□□ 0.18
SGMS1-203ENST00000429490 HAND2P61296 217 aa16.15■□□□□ 0.18
SGMS1-203ENST00000429490 UBE3BQ7Z3V4 1068 aa16.15■□□□□ 0.18
SGMS1-203ENST00000429490 HOXC9P31274 260 aa16.15■□□□□ 0.18
SGMS1-203ENST00000429490 HSP90AA4PQ58FG1 418 aa16.14■□□□□ 0.17
SGMS1-203ENST00000429490 NPHP3Q7Z494 1330 aa16.14■□□□□ 0.17
SGMS1-203ENST00000429490 BICC1Q9H694 974 aaKnown RBP16.14■□□□□ 0.17
SGMS1-203ENST00000429490 SLC27A2O14975 620 aa16.14■□□□□ 0.17
SGMS1-203ENST00000429490 RALYLQ86SE5 291 aaKnown RBP16.14■□□□□ 0.17
SGMS1-203ENST00000429490 SMAP1Q8IYB5 467 aaPredicted RBP16.14■□□□□ 0.17
SGMS1-203ENST00000429490 NR1I2O75469 434 aa16.14■□□□□ 0.17
SGMS1-203ENST00000429490 SNRKQ9NRH2 765 aa16.14■□□□□ 0.17
SGMS1-203ENST00000429490 SETBP1Q9Y6X0 1596 aa16.14■□□□□ 0.17
SGMS1-203ENST00000429490 GRM8O00222 908 aa16.13■□□□□ 0.17
SGMS1-203ENST00000429490 GOLIM4O00461 696 aa16.13■□□□□ 0.17
SGMS1-203ENST00000429490 ZNF396Q96N95 335 aaPredicted RBP16.13■□□□□ 0.17
SGMS1-203ENST00000429490 MROH2AA6NES4 1674 aa16.13■□□□□ 0.17
SGMS1-203ENST00000429490 A0A0D9SFI3 127 aa16.13■□□□□ 0.17
SGMS1-203ENST00000429490 SERPINC1P01008 464 aa16.13■□□□□ 0.17
SGMS1-203ENST00000429490 KRT32Q14532 448 aa16.13■□□□□ 0.17
SGMS1-203ENST00000429490 NAA30Q147X3 362 aaPredicted RBP16.13■□□□□ 0.17
SGMS1-203ENST00000429490 MAP3K5Q99683 1374 aa16.12■□□□□ 0.17
SGMS1-203ENST00000429490 AOPEPQ8N6M6 819 aa16.12■□□□□ 0.17
SGMS1-203ENST00000429490 PI4K2BQ8TCG2 481 aa16.12■□□□□ 0.17
SGMS1-203ENST00000429490 LEO1Q8WVC0 666 aaPredicted RBP16.12■□□□□ 0.17
SGMS1-203ENST00000429490 PODXL2Q9NZ53 605 aa16.12■□□□□ 0.17
SGMS1-203ENST00000429490 EAF2Q96CJ1 260 aaPredicted RBP16.12■□□□□ 0.17
SGMS1-203ENST00000429490 NCOA5Q9HCD5 579 aaKnown RBP16.12■□□□□ 0.17
SGMS1-203ENST00000429490 AATKQ6ZMQ8 1374 aa16.12■□□□□ 0.17
SGMS1-203ENST00000429490 TTC41PQ6P2S7 1318 aa16.12■□□□□ 0.17
SGMS1-203ENST00000429490 TTLL5Q6EMB2 1281 aa16.12■□□□□ 0.17
SGMS1-203ENST00000429490 NFXL1Q6ZNB6 911 aa16.11■□□□□ 0.17
SGMS1-203ENST00000429490 TMC6Q7Z403 805 aa16.11■□□□□ 0.17
SGMS1-203ENST00000429490 KIF18AQ8NI77 898 aa16.11■□□□□ 0.17
SGMS1-203ENST00000429490 KIAA1524Q8TCG1 905 aa16.11■□□□□ 0.17
SGMS1-203ENST00000429490 NRXN1Q9ULB1 1477 aa16.11■□□□□ 0.17
SGMS1-203ENST00000429490 APOBRQ0VD83 1088 aa16.11■□□□□ 0.17
SGMS1-203ENST00000429490 SEC62Q99442 399 aaKnown RBP16.11■□□□□ 0.17
SGMS1-203ENST00000429490 TLR7Q9NYK1 1049 aaKnown RBP16.11■□□□□ 0.17
SGMS1-203ENST00000429490 PROSER3Q2NL68 480 aa16.11■□□□□ 0.17
SGMS1-203ENST00000429490 KSR2Q6VAB6 950 aa16.11■□□□□ 0.17
SGMS1-203ENST00000429490 KIAA1210Q9ULL0 1709 aa16.11■□□□□ 0.17
SGMS1-203ENST00000429490 COL3A1P02461 1466 aaPredicted RBP16.1■□□□□ 0.17
SGMS1-203ENST00000429490 A0A087WZG4 1122 aa16.1■□□□□ 0.17
SGMS1-203ENST00000429490 PRAMEF22A3QJZ6 481 aa16.1■□□□□ 0.17
SGMS1-203ENST00000429490 TRDNQ13061 729 aa16.1■□□□□ 0.17
SGMS1-203ENST00000429490 OTUD7BQ6GQQ9 843 aa16.1■□□□□ 0.17
SGMS1-203ENST00000429490 COPS6Q7L5N1 327 aa16.1■□□□□ 0.17
SGMS1-203ENST00000429490 ANO10Q9NW15 660 aa16.1■□□□□ 0.17
SGMS1-203ENST00000429490 SFPQP23246 707 aaKnown RBP eCLIP16.1■□□□□ 0.17
SGMS1-203ENST00000429490 FTOQ9C0B1 505 aaKnown RBP eCLIP16.1■□□□□ 0.17
SGMS1-203ENST00000429490 VIRMAQ69YN4 1812 aaKnown RBP16.1■□□□□ 0.17
SGMS1-203ENST00000429490 CCDC69A6NI79 296 aa16.09■□□□□ 0.17
SGMS1-203ENST00000429490 SUCLG2Q96I99 432 aa16.09■□□□□ 0.17
SGMS1-203ENST00000429490 ZNF75DP51815 510 aa16.09■□□□□ 0.17
SGMS1-203ENST00000429490 XAGE3Q8WTP9 111 aa16.09■□□□□ 0.17
SGMS1-203ENST00000429490 PHF8Q9UPP1 1060 aa16.09■□□□□ 0.17
SGMS1-203ENST00000429490 CDK12Q9NYV4 1490 aaPredicted RBP16.09■□□□□ 0.17
SGMS1-203ENST00000429490 CAMSAP1Q5T5Y3 1602 aa16.09■□□□□ 0.17
SGMS1-203ENST00000429490 ATP2B3Q16720 1220 aa16.09■□□□□ 0.17
SGMS1-203ENST00000429490 CFAP100Q494V2 611 aa16.09■□□□□ 0.17
SGMS1-203ENST00000429490 NBPF6Q5VWK0 638 aa16.09■□□□□ 0.17
SGMS1-203ENST00000429490 NBPF4Q96M43 638 aa16.09■□□□□ 0.17
SGMS1-203ENST00000429490 MRVI1Q9Y6F6 885 aa16.09■□□□□ 0.17
SGMS1-203ENST00000429490 PTPRMP28827 1452 aa16.09■□□□□ 0.17
SGMS1-203ENST00000429490 A0A1B0GVL5 298 aa16.08■□□□□ 0.17
SGMS1-203ENST00000429490 PES1O00541 588 aaKnown RBP16.08■□□□□ 0.17
SGMS1-203ENST00000429490 RPS6KB1P23443 525 aa16.08■□□□□ 0.17
SGMS1-203ENST00000429490 STX1AQ16623 288 aa16.08■□□□□ 0.17
SGMS1-203ENST00000429490 BEND3Q5T5X7 828 aa16.08■□□□□ 0.17
SGMS1-203ENST00000429490 ZSWIM6Q9HCJ5 1215 aa16.08■□□□□ 0.17
SGMS1-203ENST00000429490 POLR3GO15318 223 aaPredicted RBP16.08■□□□□ 0.16
SGMS1-203ENST00000429490 LTKP29376 864 aa16.08■□□□□ 0.16
SGMS1-203ENST00000429490 EIF4A1P60842 406 aaKnown RBP16.08■□□□□ 0.16
SGMS1-203ENST00000429490 HSP90AB3PQ58FF7 597 aa16.08■□□□□ 0.16
SGMS1-203ENST00000429490 MLH3Q9UHC1 1453 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms