RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 DICER1Q9UPY3 1922 aaKnown RBP13.25□□□□□ -0.29
GACAT3-201ENST00000426539 ERBB4Q15303 1308 aa13.24□□□□□ -0.29
GACAT3-201ENST00000426539 ZNF541Q9H0D2 1346 aa13.24□□□□□ -0.29
GACAT3-201ENST00000426539 GTF2E1P29083 439 aaPredicted RBP13.24□□□□□ -0.29
GACAT3-201ENST00000426539 TMPOP42166 694 aaKnown RBP13.24□□□□□ -0.29
GACAT3-201ENST00000426539 PROSER3Q2NL68 480 aa13.24□□□□□ -0.29
GACAT3-201ENST00000426539 KIF6Q6ZMV9 814 aa13.24□□□□□ -0.29
GACAT3-201ENST00000426539 CACNA1SQ13698 1873 aa13.23□□□□□ -0.29
GACAT3-201ENST00000426539 IBTKQ9P2D0 1353 aaPredicted RBP13.23□□□□□ -0.29
GACAT3-201ENST00000426539 NTSR2O95665 410 aa13.23□□□□□ -0.29
GACAT3-201ENST00000426539 ANXA1P04083 346 aa13.23□□□□□ -0.29
GACAT3-201ENST00000426539 ALDH1B1P30837 517 aa13.23□□□□□ -0.29
GACAT3-201ENST00000426539 DDX10Q13206 875 aaKnown RBP13.23□□□□□ -0.29
GACAT3-201ENST00000426539 GIGYF2Q6Y7W6 1299 aaKnown RBP13.23□□□□□ -0.29
GACAT3-201ENST00000426539 C3orf67Q6ZVT6 689 aa13.23□□□□□ -0.29
GACAT3-201ENST00000426539 RTKN2Q8IZC4 609 aa13.23□□□□□ -0.29
GACAT3-201ENST00000426539 L3MBTL3Q96JM7 780 aaPredicted RBP13.23□□□□□ -0.29
GACAT3-201ENST00000426539 NYXQ9GZU5 481 aa13.23□□□□□ -0.29
GACAT3-201ENST00000426539 RIC1Q4ADV7 1423 aa13.22□□□□□ -0.29
GACAT3-201ENST00000426539 EIF2S2P20042 333 aaKnown RBP13.22□□□□□ -0.29
GACAT3-201ENST00000426539 HOXA10P31260 410 aaPredicted RBP13.22□□□□□ -0.29
GACAT3-201ENST00000426539 CHADLQ6NUI6 762 aa13.22□□□□□ -0.29
GACAT3-201ENST00000426539 CCDC146Q8IYE0 955 aa13.22□□□□□ -0.29
GACAT3-201ENST00000426539 SYNE4Q8N205 404 aa13.22□□□□□ -0.29
GACAT3-201ENST00000426539 BABAM1Q9NWV8 329 aa13.22□□□□□ -0.29
GACAT3-201ENST00000426539 MYBBP1AQ9BQG0 1328 aaKnown RBP13.21□□□□□ -0.29
GACAT3-201ENST00000426539 FZD9O00144 591 aa13.21□□□□□ -0.29
GACAT3-201ENST00000426539 IARSP41252 1262 aaKnown RBP13.21□□□□□ -0.29
GACAT3-201ENST00000426539 TAF1DQ9H5J8 278 aaPredicted RBP13.21□□□□□ -0.29
GACAT3-201ENST00000426539 NUP98P52948 1817 aa13.2□□□□□ -0.3
GACAT3-201ENST00000426539 KRT24Q2M2I5 525 aa13.2□□□□□ -0.3
GACAT3-201ENST00000426539 PSMD1Q99460 953 aa13.2□□□□□ -0.3
GACAT3-201ENST00000426539 TRIM35Q9UPQ4 493 aa13.2□□□□□ -0.3
GACAT3-201ENST00000426539 COL4A5P29400 1685 aa13.2□□□□□ -0.3
GACAT3-201ENST00000426539 IQCA1LA6NCM1 817 aa13.19□□□□□ -0.3
GACAT3-201ENST00000426539 CHL1O00533 1208 aa13.19□□□□□ -0.3
GACAT3-201ENST00000426539 LMOD3Q0VAK6 560 aa13.19□□□□□ -0.3
GACAT3-201ENST00000426539 NEUROD2Q15784 382 aa13.19□□□□□ -0.3
GACAT3-201ENST00000426539 NECTIN2Q92692 538 aa13.19□□□□□ -0.3
GACAT3-201ENST00000426539 RPGRQ92834 1020 aaKnown RBP13.19□□□□□ -0.3
GACAT3-201ENST00000426539 CRAMP1Q96RY5 1269 aa13.19□□□□□ -0.3
GACAT3-201ENST00000426539 PASKQ96RG2 1323 aa13.18□□□□□ -0.3
GACAT3-201ENST00000426539 PARP10Q53GL7 1025 aa13.18□□□□□ -0.3
GACAT3-201ENST00000426539 SLC10A5Q5PT55 438 aa13.18□□□□□ -0.3
GACAT3-201ENST00000426539 COL13A1Q5TAT6 717 aaPredicted RBP13.18□□□□□ -0.3
GACAT3-201ENST00000426539 CC2D2BQ6DHV5 1058 aa13.18□□□□□ -0.3
GACAT3-201ENST00000426539 COPS6Q7L5N1 327 aa13.18□□□□□ -0.3
GACAT3-201ENST00000426539 LDHDQ86WU2 507 aa13.18□□□□□ -0.3
GACAT3-201ENST00000426539 PPEF1O14829 653 aaPredicted RBP13.17□□□□□ -0.3
GACAT3-201ENST00000426539 PPP1R42Q7Z4L9 355 aa13.17□□□□□ -0.3
GACAT3-201ENST00000426539 XAGE3Q8WTP9 111 aa13.17□□□□□ -0.3
GACAT3-201ENST00000426539 RUNDC1Q96C34 613 aa13.17□□□□□ -0.3
GACAT3-201ENST00000426539 RBM17Q96I25 401 aaKnown RBP13.17□□□□□ -0.3
GACAT3-201ENST00000426539 UTP14AQ9BVJ6 771 aaKnown RBP13.17□□□□□ -0.3
GACAT3-201ENST00000426539 CREBZFQ9NS37 354 aa13.17□□□□□ -0.3
GACAT3-201ENST00000426539 ADAMTS8Q9UP79 889 aa13.17□□□□□ -0.3
GACAT3-201ENST00000426539 RNF123Q5XPI4 1314 aa13.16□□□□□ -0.3
GACAT3-201ENST00000426539 TCERG1O14776 1098 aaKnown RBP13.16□□□□□ -0.3
GACAT3-201ENST00000426539 ITGBL1O95965 494 aaPredicted RBP13.16□□□□□ -0.3
GACAT3-201ENST00000426539 EPHX2P34913 555 aa13.16□□□□□ -0.3
GACAT3-201ENST00000426539 AIMP1Q12904 312 aaKnown RBP13.16□□□□□ -0.3
GACAT3-201ENST00000426539 NLRP10Q86W26 655 aa13.16□□□□□ -0.3
GACAT3-201ENST00000426539 DDX21Q9NR30 783 aaKnown RBP eCLIP13.16□□□□□ -0.3
GACAT3-201ENST00000426539 HACL1Q9UJ83 578 aa13.16□□□□□ -0.3
GACAT3-201ENST00000426539 HSPA1AP0DMV8 641 aaKnown RBP13.15□□□□□ -0.3
GACAT3-201ENST00000426539 HSPA1BP0DMV9 641 aaKnown RBP13.15□□□□□ -0.3
GACAT3-201ENST00000426539 TCIRG1Q13488 830 aa13.15□□□□□ -0.3
GACAT3-201ENST00000426539 EAPPQ56P03 285 aaPredicted RBP13.15□□□□□ -0.3
GACAT3-201ENST00000426539 GPC2Q8N158 579 aa13.15□□□□□ -0.3
GACAT3-201ENST00000426539 NLRP3Q96P20 1036 aa13.15□□□□□ -0.3
GACAT3-201ENST00000426539 MKRN1Q9UHC7 482 aaKnown RBP13.15□□□□□ -0.3
GACAT3-201ENST00000426539 ADAMTSL1Q8N6G6 1762 aa13.15□□□□□ -0.31
GACAT3-201ENST00000426539 ABCC4O15439 1325 aa13.14□□□□□ -0.31
GACAT3-201ENST00000426539 SCN4AP35499 1836 aa13.14□□□□□ -0.31
GACAT3-201ENST00000426539 HCLS1P14317 486 aaPredicted RBP13.14□□□□□ -0.31
GACAT3-201ENST00000426539 GRIPAP1Q4V328 841 aa13.14□□□□□ -0.31
GACAT3-201ENST00000426539 JDP2Q8WYK2 163 aa13.14□□□□□ -0.31
GACAT3-201ENST00000426539 CHPF2Q9P2E5 772 aa13.14□□□□□ -0.31
GACAT3-201ENST00000426539 ATP6V0A2Q9Y487 856 aa13.14□□□□□ -0.31
GACAT3-201ENST00000426539 LAS1LQ9Y4W2 734 aaKnown RBP13.14□□□□□ -0.31
GACAT3-201ENST00000426539 SCNN1DP51172 638 aa13.13□□□□□ -0.31
GACAT3-201ENST00000426539 WDR43Q15061 677 aaKnown RBP eCLIP13.13□□□□□ -0.31
GACAT3-201ENST00000426539 HSP90AB3PQ58FF7 597 aa13.13□□□□□ -0.31
GACAT3-201ENST00000426539 LARGE2Q8N3Y3 721 aa13.13□□□□□ -0.31
GACAT3-201ENST00000426539 ZNF428Q96B54 188 aa13.13□□□□□ -0.31
GACAT3-201ENST00000426539 PRKRIP1Q9H875 184 aaPredicted RBP13.13□□□□□ -0.31
GACAT3-201ENST00000426539 GJA3Q9Y6H8 435 aa13.13□□□□□ -0.31
GACAT3-201ENST00000426539 LTBP1Q14766 1721 aa13.13□□□□□ -0.31
GACAT3-201ENST00000426539 CNTNAP1P78357 1384 aa13.12□□□□□ -0.31
GACAT3-201ENST00000426539 EIF6P56537 245 aaKnown RBP13.12□□□□□ -0.31
GACAT3-201ENST00000426539 HDGFL1Q5TGJ6 251 aa13.12□□□□□ -0.31
GACAT3-201ENST00000426539 MAP1SQ66K74 1059 aaPredicted RBP13.12□□□□□ -0.31
GACAT3-201ENST00000426539 PNMA8AQ86V59 439 aaPredicted RBP13.12□□□□□ -0.31
GACAT3-201ENST00000426539 RTFDC1Q9BY42 306 aaPredicted RBP13.12□□□□□ -0.31
GACAT3-201ENST00000426539 CLEC11AQ9Y240 323 aa13.12□□□□□ -0.31
GACAT3-201ENST00000426539 SH3TC1Q8TE82 1336 aa13.12□□□□□ -0.31
GACAT3-201ENST00000426539 TMEM88BA6NKF7 163 aa13.11□□□□□ -0.31
GACAT3-201ENST00000426539 PPIP5K2O43314 1243 aa13.11□□□□□ -0.31
GACAT3-201ENST00000426539 HOXB7P09629 217 aa13.11□□□□□ -0.31
GACAT3-201ENST00000426539 ZNF853P0CG23 659 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms