RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 DDX60Q8IY21 1712 aaKnown RBP22.65■■□□□ 1.22
PTCD1-202ENST00000419981 ZNF541Q9H0D2 1346 aa22.65■■□□□ 1.22
PTCD1-202ENST00000419981 PDIA6Q15084 440 aa22.65■■□□□ 1.22
PTCD1-202ENST00000419981 NEUROD2Q15784 382 aa22.65■■□□□ 1.22
PTCD1-202ENST00000419981 PARP10Q53GL7 1025 aa22.65■■□□□ 1.22
PTCD1-202ENST00000419981 SYNE4Q8N205 404 aa22.65■■□□□ 1.22
PTCD1-202ENST00000419981 ANXA1P04083 346 aa22.64■■□□□ 1.21
PTCD1-202ENST00000419981 POTEIP0CG38 1075 aa22.64■■□□□ 1.21
PTCD1-202ENST00000419981 POTEJP0CG39 1038 aa22.64■■□□□ 1.21
PTCD1-202ENST00000419981 HOXA10P31260 410 aaPredicted RBP22.64■■□□□ 1.21
PTCD1-202ENST00000419981 WDR43Q15061 677 aaKnown RBP eCLIP22.64■■□□□ 1.21
PTCD1-202ENST00000419981 PROSER3Q2NL68 480 aa22.64■■□□□ 1.21
PTCD1-202ENST00000419981 CC2D2BQ6DHV5 1058 aa22.64■■□□□ 1.21
PTCD1-202ENST00000419981 RBM17Q96I25 401 aaKnown RBP22.64■■□□□ 1.21
PTCD1-202ENST00000419981 PSMD1Q99460 953 aa22.64■■□□□ 1.21
PTCD1-202ENST00000419981 RUNDC1Q96C34 613 aa22.63■■□□□ 1.21
PTCD1-202ENST00000419981 COL4A5P29400 1685 aa22.62■■□□□ 1.21
PTCD1-202ENST00000419981 NECTIN2Q92692 538 aa22.62■■□□□ 1.21
PTCD1-202ENST00000419981 CRAMP1Q96RY5 1269 aa22.62■■□□□ 1.21
PTCD1-202ENST00000419981 TAF1DQ9H5J8 278 aaPredicted RBP22.62■■□□□ 1.21
PTCD1-202ENST00000419981 FZD9O00144 591 aa22.61■■□□□ 1.21
PTCD1-202ENST00000419981 GRIPAP1Q4V328 841 aa22.61■■□□□ 1.21
PTCD1-202ENST00000419981 LDHDQ86WU2 507 aa22.61■■□□□ 1.21
PTCD1-202ENST00000419981 TRPM7Q96QT4 1865 aa22.61■■□□□ 1.21
PTCD1-202ENST00000419981 UTP14AQ9BVJ6 771 aaKnown RBP22.61■■□□□ 1.21
PTCD1-202ENST00000419981 LTBP1Q14766 1721 aa22.6■■□□□ 1.21
PTCD1-202ENST00000419981 PPEF1O14829 653 aaPredicted RBP22.6■■□□□ 1.21
PTCD1-202ENST00000419981 JDP2Q8WYK2 163 aa22.6■■□□□ 1.21
PTCD1-202ENST00000419981 NLRP3Q96P20 1036 aa22.6■■□□□ 1.21
PTCD1-202ENST00000419981 HACL1Q9UJ83 578 aa22.6■■□□□ 1.21
PTCD1-202ENST00000419981 LAS1LQ9Y4W2 734 aaKnown RBP22.6■■□□□ 1.21
PTCD1-202ENST00000419981 RNF123Q5XPI4 1314 aa22.59■■□□□ 1.21
PTCD1-202ENST00000419981 CHL1O00533 1208 aa22.59■■□□□ 1.21
PTCD1-202ENST00000419981 AIMP1Q12904 312 aaKnown RBP22.59■■□□□ 1.21
PTCD1-202ENST00000419981 HSP90AB3PQ58FF7 597 aa22.59■■□□□ 1.21
PTCD1-202ENST00000419981 C3orf67Q6ZVT6 689 aa22.59■■□□□ 1.21
PTCD1-202ENST00000419981 COPS6Q7L5N1 327 aa22.59■■□□□ 1.21
PTCD1-202ENST00000419981 XAGE3Q8WTP9 111 aa22.59■■□□□ 1.21
PTCD1-202ENST00000419981 CREBZFQ9NS37 354 aa22.59■■□□□ 1.21
PTCD1-202ENST00000419981 TRIM35Q9UPQ4 493 aa22.59■■□□□ 1.21
PTCD1-202ENST00000419981 LRRC37AA6NMS7 1700 aa22.58■■□□□ 1.21
PTCD1-202ENST00000419981 EAPPQ56P03 285 aaPredicted RBP22.58■■□□□ 1.21
PTCD1-202ENST00000419981 DDX21Q9NR30 783 aaKnown RBP eCLIP22.58■■□□□ 1.21
PTCD1-202ENST00000419981 TCERG1O14776 1098 aaKnown RBP22.57■■□□□ 1.2
PTCD1-202ENST00000419981 EPHX2P34913 555 aa22.57■■□□□ 1.2
PTCD1-202ENST00000419981 KRT24Q2M2I5 525 aa22.57■■□□□ 1.2
PTCD1-202ENST00000419981 GPC2Q8N158 579 aa22.57■■□□□ 1.2
PTCD1-202ENST00000419981 ADAMTS8Q9UP79 889 aa22.57■■□□□ 1.2
PTCD1-202ENST00000419981 EIF6P56537 245 aaKnown RBP22.56■■□□□ 1.2
PTCD1-202ENST00000419981 SLC10A5Q5PT55 438 aa22.56■■□□□ 1.2
PTCD1-202ENST00000419981 PCNTO95613 3336 aa22.56■■□□□ 1.2
PTCD1-202ENST00000419981 NLRP10Q86W26 655 aa22.55■■□□□ 1.2
PTCD1-202ENST00000419981 LARGE2Q8N3Y3 721 aa22.55■■□□□ 1.2
PTCD1-202ENST00000419981 TMX4Q9H1E5 349 aaPredicted RBP22.55■■□□□ 1.2
PTCD1-202ENST00000419981 CHPF2Q9P2E5 772 aa22.55■■□□□ 1.2
PTCD1-202ENST00000419981 ABCC4O15439 1325 aa22.55■■□□□ 1.2
PTCD1-202ENST00000419981 PASKQ96RG2 1323 aa22.55■■□□□ 1.2
PTCD1-202ENST00000419981 HOXB7P09629 217 aa22.54■■□□□ 1.2
PTCD1-202ENST00000419981 TCIRG1Q13488 830 aa22.54■■□□□ 1.2
PTCD1-202ENST00000419981 HDGFL1Q5TGJ6 251 aa22.54■■□□□ 1.2
PTCD1-202ENST00000419981 SLC51AQ86UW1 340 aa22.54■■□□□ 1.2
PTCD1-202ENST00000419981 PNMA8AQ86V59 439 aaPredicted RBP22.54■■□□□ 1.2
PTCD1-202ENST00000419981 CLEC11AQ9Y240 323 aa22.54■■□□□ 1.2
PTCD1-202ENST00000419981 HSPA1AP0DMV8 641 aaKnown RBP22.53■■□□□ 1.2
PTCD1-202ENST00000419981 HSPA1BP0DMV9 641 aaKnown RBP22.53■■□□□ 1.2
PTCD1-202ENST00000419981 PRKRIP1Q9H875 184 aaPredicted RBP22.53■■□□□ 1.2
PTCD1-202ENST00000419981 ATP6V0A2Q9Y487 856 aa22.53■■□□□ 1.2
PTCD1-202ENST00000419981 GJA3Q9Y6H8 435 aa22.53■■□□□ 1.2
PTCD1-202ENST00000419981 NIM1KQ8IY84 436 aa22.52■■□□□ 1.2
PTCD1-202ENST00000419981 MKRN1Q9UHC7 482 aaKnown RBP22.52■■□□□ 1.2
PTCD1-202ENST00000419981 TRMT112Q9UI30 125 aaKnown RBP22.52■■□□□ 1.2
PTCD1-202ENST00000419981 SH3TC1Q8TE82 1336 aa22.52■■□□□ 1.2
PTCD1-202ENST00000419981 HCLS1P14317 486 aaPredicted RBP22.51■■□□□ 1.19
PTCD1-202ENST00000419981 LMOD1P29536 600 aaPredicted RBP22.51■■□□□ 1.19
PTCD1-202ENST00000419981 COL13A1Q5TAT6 717 aaPredicted RBP22.51■■□□□ 1.19
PTCD1-202ENST00000419981 CFAP44Q96MT7 982 aa22.51■■□□□ 1.19
PTCD1-202ENST00000419981 PPIP5K2O43314 1243 aa22.5■■□□□ 1.19
PTCD1-202ENST00000419981 ITGBL1O95965 494 aaPredicted RBP22.5■■□□□ 1.19
PTCD1-202ENST00000419981 DBF4Q9UBU7 674 aaPredicted RBP22.5■■□□□ 1.19
PTCD1-202ENST00000419981 CNTNAP1P78357 1384 aa22.5■■□□□ 1.19
PTCD1-202ENST00000419981 MYH3P11055 1940 aa22.49■■□□□ 1.19
PTCD1-202ENST00000419981 SUPT20HQ8NEM7 779 aa22.49■■□□□ 1.19
PTCD1-202ENST00000419981 PLBD2Q8NHP8 589 aa22.49■■□□□ 1.19
PTCD1-202ENST00000419981 VPS33BQ9H267 617 aa22.49■■□□□ 1.19
PTCD1-202ENST00000419981 TMEM88BA6NKF7 163 aa22.48■■□□□ 1.19
PTCD1-202ENST00000419981 BBOX1O75936 387 aa22.48■■□□□ 1.19
PTCD1-202ENST00000419981 AOC3Q16853 763 aa22.48■■□□□ 1.19
PTCD1-202ENST00000419981 MAP1SQ66K74 1059 aaPredicted RBP22.48■■□□□ 1.19
PTCD1-202ENST00000419981 DDX46Q7L014 1031 aaKnown RBP22.48■■□□□ 1.19
PTCD1-202ENST00000419981 MBIPQ9NS73 344 aa22.48■■□□□ 1.19
PTCD1-202ENST00000419981 DUOX1Q9NRD9 1551 aa22.47■■□□□ 1.19
PTCD1-202ENST00000419981 DUSP27Q5VZP5 1158 aa22.47■■□□□ 1.19
PTCD1-202ENST00000419981 ANKRD13DQ6ZTN6 518 aa22.47■■□□□ 1.19
PTCD1-202ENST00000419981 SP8Q8IXZ3 490 aa22.47■■□□□ 1.19
PTCD1-202ENST00000419981 SCNN1DP51172 638 aa22.46■■□□□ 1.19
PTCD1-202ENST00000419981 GRAPQ13588 217 aa22.46■■□□□ 1.19
PTCD1-202ENST00000419981 DPP8Q6V1X1 898 aaPredicted RBP22.46■■□□□ 1.19
PTCD1-202ENST00000419981 CNTROBQ8N137 903 aa22.46■■□□□ 1.19
PTCD1-202ENST00000419981 GRAPLQ8TC17 118 aaPredicted RBP22.46■■□□□ 1.19
PTCD1-202ENST00000419981 RTFDC1Q9BY42 306 aaPredicted RBP22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms