RNA–Protein interactions for RNA: ENST00000419015.1

COPS8-204, Transcript of COP9 signalosome subunit 8, humanhuman

TSL 3

Gene COPS8, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-204ENST00000419015 COL13A1Q5TAT6 717 aaPredicted RBP24.11■■□□□ 1.45
COPS8-204ENST00000419015 COL4A5P29400 1685 aa24.11■■□□□ 1.45
COPS8-204ENST00000419015 PASKQ96RG2 1323 aa24.1■■□□□ 1.45
COPS8-204ENST00000419015 ANKRD36CQ5JPF3 1778 aa24.09■■□□□ 1.45
COPS8-204ENST00000419015 PROSER3Q2NL68 480 aa24.09■■□□□ 1.45
COPS8-204ENST00000419015 C3orf67Q6ZVT6 689 aa24.09■■□□□ 1.45
COPS8-204ENST00000419015 LDHDQ86WU2 507 aa24.09■■□□□ 1.45
COPS8-204ENST00000419015 CREBZFQ9NS37 354 aa24.09■■□□□ 1.45
COPS8-204ENST00000419015 CC2D2BQ6DHV5 1058 aa24.08■■□□□ 1.45
COPS8-204ENST00000419015 SLC51AQ86UW1 340 aa24.08■■□□□ 1.45
COPS8-204ENST00000419015 EIF2S2P20042 333 aaKnown RBP24.07■■□□□ 1.44
COPS8-204ENST00000419015 RPGRQ92834 1020 aaKnown RBP24.07■■□□□ 1.44
COPS8-204ENST00000419015 CRAMP1Q96RY5 1269 aa24.07■■□□□ 1.44
COPS8-204ENST00000419015 ANXA1P04083 346 aa24.06■■□□□ 1.44
COPS8-204ENST00000419015 PARP10Q53GL7 1025 aa24.06■■□□□ 1.44
COPS8-204ENST00000419015 HACL1Q9UJ83 578 aa24.06■■□□□ 1.44
COPS8-204ENST00000419015 LAMB2P55268 1798 aa24.06■■□□□ 1.44
COPS8-204ENST00000419015 ITGBL1O95965 494 aaPredicted RBP24.05■■□□□ 1.44
COPS8-204ENST00000419015 HSPA1AP0DMV8 641 aaKnown RBP24.05■■□□□ 1.44
COPS8-204ENST00000419015 HSPA1BP0DMV9 641 aaKnown RBP24.05■■□□□ 1.44
COPS8-204ENST00000419015 LMOD3Q0VAK6 560 aa24.05■■□□□ 1.44
COPS8-204ENST00000419015 PPP1R42Q7Z4L9 355 aa24.05■■□□□ 1.44
COPS8-204ENST00000419015 GPC2Q8N158 579 aa24.05■■□□□ 1.44
COPS8-204ENST00000419015 RNF123Q5XPI4 1314 aa24.05■■□□□ 1.44
COPS8-204ENST00000419015 MYBBP1AQ9BQG0 1328 aaKnown RBP24.05■■□□□ 1.44
COPS8-204ENST00000419015 LTBP1Q14766 1721 aa24.04■■□□□ 1.44
COPS8-204ENST00000419015 EPHX2P34913 555 aa24.04■■□□□ 1.44
COPS8-204ENST00000419015 GRIPAP1Q4V328 841 aa24.04■■□□□ 1.44
COPS8-204ENST00000419015 SLC10A5Q5PT55 438 aa24.04■■□□□ 1.44
COPS8-204ENST00000419015 RBM17Q96I25 401 aaKnown RBP24.04■■□□□ 1.44
COPS8-204ENST00000419015 DDX10Q13206 875 aaKnown RBP24.03■■□□□ 1.44
COPS8-204ENST00000419015 CHL1O00533 1208 aa24.02■■□□□ 1.44
COPS8-204ENST00000419015 PPEF1O14829 653 aaPredicted RBP24.02■■□□□ 1.44
COPS8-204ENST00000419015 CCDC146Q8IYE0 955 aa24.02■■□□□ 1.44
COPS8-204ENST00000419015 JDP2Q8WYK2 163 aa24.02■■□□□ 1.44
COPS8-204ENST00000419015 UTP14AQ9BVJ6 771 aaKnown RBP24.02■■□□□ 1.44
COPS8-204ENST00000419015 TRIM35Q9UPQ4 493 aa24.02■■□□□ 1.44
COPS8-204ENST00000419015 KRT24Q2M2I5 525 aa24.01■■□□□ 1.43
COPS8-204ENST00000419015 EAPPQ56P03 285 aaPredicted RBP24.01■■□□□ 1.43
COPS8-204ENST00000419015 COPS6Q7L5N1 327 aa24.01■■□□□ 1.43
COPS8-204ENST00000419015 NLRP3Q96P20 1036 aa24.01■■□□□ 1.43
COPS8-204ENST00000419015 MKRN1Q9UHC7 482 aaKnown RBP24.01■■□□□ 1.43
COPS8-204ENST00000419015 CNTNAP1P78357 1384 aa24.01■■□□□ 1.43
COPS8-204ENST00000419015 PNMA8AQ86V59 439 aaPredicted RBP24■■□□□ 1.43
COPS8-204ENST00000419015 NECTIN2Q92692 538 aa24■■□□□ 1.43
COPS8-204ENST00000419015 NEUROD2Q15784 382 aa23.99■■□□□ 1.43
COPS8-204ENST00000419015 NLRP10Q86W26 655 aa23.99■■□□□ 1.43
COPS8-204ENST00000419015 XAGE3Q8WTP9 111 aa23.99■■□□□ 1.43
COPS8-204ENST00000419015 DDX21Q9NR30 783 aaKnown RBP eCLIP23.99■■□□□ 1.43
COPS8-204ENST00000419015 ABCC4O15439 1325 aa23.99■■□□□ 1.43
COPS8-204ENST00000419015 TCERG1O14776 1098 aaKnown RBP23.98■■□□□ 1.43
COPS8-204ENST00000419015 EIF6P56537 245 aaKnown RBP23.98■■□□□ 1.43
COPS8-204ENST00000419015 RUNDC1Q96C34 613 aa23.98■■□□□ 1.43
COPS8-204ENST00000419015 ATP6V0A2Q9Y487 856 aa23.98■■□□□ 1.43
COPS8-204ENST00000419015 TAF1P21675 1872 aa23.97■■□□□ 1.43
COPS8-204ENST00000419015 SCNN1DP51172 638 aa23.97■■□□□ 1.43
COPS8-204ENST00000419015 AIMP1Q12904 312 aaKnown RBP23.97■■□□□ 1.43
COPS8-204ENST00000419015 HSP90AB3PQ58FF7 597 aa23.97■■□□□ 1.43
COPS8-204ENST00000419015 LARGE2Q8N3Y3 721 aa23.97■■□□□ 1.43
COPS8-204ENST00000419015 TMEM88BA6NKF7 163 aa23.96■■□□□ 1.43
COPS8-204ENST00000419015 TCIRG1Q13488 830 aa23.96■■□□□ 1.43
COPS8-204ENST00000419015 MAP1SQ66K74 1059 aaPredicted RBP23.96■■□□□ 1.43
COPS8-204ENST00000419015 CNTROBQ8N137 903 aa23.96■■□□□ 1.43
COPS8-204ENST00000419015 CLEC11AQ9Y240 323 aa23.96■■□□□ 1.43
COPS8-204ENST00000419015 RTFDC1Q9BY42 306 aaPredicted RBP23.95■■□□□ 1.42
COPS8-204ENST00000419015 ADAMTS8Q9UP79 889 aa23.95■■□□□ 1.42
COPS8-204ENST00000419015 GJA3Q9Y6H8 435 aa23.95■■□□□ 1.42
COPS8-204ENST00000419015 DDX60Q8IY21 1712 aaKnown RBP23.95■■□□□ 1.42
COPS8-204ENST00000419015 HCLS1P14317 486 aaPredicted RBP23.94■■□□□ 1.42
COPS8-204ENST00000419015 VPS33BQ9H267 617 aa23.94■■□□□ 1.42
COPS8-204ENST00000419015 CHPF2Q9P2E5 772 aa23.94■■□□□ 1.42
COPS8-204ENST00000419015 HOXB7P09629 217 aa23.93■■□□□ 1.42
COPS8-204ENST00000419015 AOC3Q16853 763 aa23.93■■□□□ 1.42
COPS8-204ENST00000419015 TNS4Q8IZW8 715 aa23.93■■□□□ 1.42
COPS8-204ENST00000419015 PPIP5K2O43314 1243 aa23.92■■□□□ 1.42
COPS8-204ENST00000419015 BBOX1O75936 387 aa23.92■■□□□ 1.42
COPS8-204ENST00000419015 EPS15P42566 896 aa23.92■■□□□ 1.42
COPS8-204ENST00000419015 WDR43Q15061 677 aaKnown RBP eCLIP23.92■■□□□ 1.42
COPS8-204ENST00000419015 NIM1KQ8IY84 436 aa23.92■■□□□ 1.42
COPS8-204ENST00000419015 TRMT112Q9UI30 125 aaKnown RBP23.92■■□□□ 1.42
COPS8-204ENST00000419015 LAS1LQ9Y4W2 734 aaKnown RBP23.92■■□□□ 1.42
COPS8-204ENST00000419015 SH3TC1Q8TE82 1336 aa23.91■■□□□ 1.42
COPS8-204ENST00000419015 LRRC37AA6NMS7 1700 aa23.91■■□□□ 1.42
COPS8-204ENST00000419015 VEGFBP49765 207 aa23.91■■□□□ 1.42
COPS8-204ENST00000419015 SP8Q8IXZ3 490 aa23.91■■□□□ 1.42
COPS8-204ENST00000419015 LMOD1P29536 600 aaPredicted RBP23.9■■□□□ 1.42
COPS8-204ENST00000419015 HDGFL1Q5TGJ6 251 aa23.9■■□□□ 1.42
COPS8-204ENST00000419015 CFAP44Q96MT7 982 aa23.9■■□□□ 1.42
COPS8-204ENST00000419015 DUOX1Q9NRD9 1551 aa23.9■■□□□ 1.42
COPS8-204ENST00000419015 RASSF10A6NK89 507 aa23.89■■□□□ 1.41
COPS8-204ENST00000419015 PLBD2Q8NHP8 589 aa23.89■■□□□ 1.41
COPS8-204ENST00000419015 TMX4Q9H1E5 349 aaPredicted RBP23.89■■□□□ 1.41
COPS8-204ENST00000419015 TRPM7Q96QT4 1865 aa23.88■■□□□ 1.41
COPS8-204ENST00000419015 GRAPQ13588 217 aa23.88■■□□□ 1.41
COPS8-204ENST00000419015 ANKRD13DQ6ZTN6 518 aa23.88■■□□□ 1.41
COPS8-204ENST00000419015 USP50Q70EL3 339 aaPredicted RBP23.88■■□□□ 1.41
COPS8-204ENST00000419015 SUPT20HQ8NEM7 779 aa23.88■■□□□ 1.41
COPS8-204ENST00000419015 GRAPLQ8TC17 118 aaPredicted RBP23.88■■□□□ 1.41
COPS8-204ENST00000419015 ISCA1Q9BUE6 129 aa23.88■■□□□ 1.41
COPS8-204ENST00000419015 PRKRIP1Q9H875 184 aaPredicted RBP23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms