RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 ANKRD36CQ5JPF3 1778 aa16.37■□□□□ 0.21
NCKIPSD-203ENST00000415281 EIF2S2P20042 333 aaKnown RBP16.37■□□□□ 0.21
NCKIPSD-203ENST00000415281 SLC10A5Q5PT55 438 aa16.37■□□□□ 0.21
NCKIPSD-203ENST00000415281 SYNE4Q8N205 404 aa16.37■□□□□ 0.21
NCKIPSD-203ENST00000415281 L3MBTL3Q96JM7 780 aaPredicted RBP16.37■□□□□ 0.21
NCKIPSD-203ENST00000415281 ADAMTS8Q9UP79 889 aa16.37■□□□□ 0.21
NCKIPSD-203ENST00000415281 TAF1P21675 1872 aa16.36■□□□□ 0.21
NCKIPSD-203ENST00000415281 FZD9O00144 591 aa16.36■□□□□ 0.21
NCKIPSD-203ENST00000415281 ALDH1B1P30837 517 aa16.36■□□□□ 0.21
NCKIPSD-203ENST00000415281 KIF6Q6ZMV9 814 aa16.36■□□□□ 0.21
NCKIPSD-203ENST00000415281 NYXQ9GZU5 481 aa16.36■□□□□ 0.21
NCKIPSD-203ENST00000415281 LTBP1Q14766 1721 aa16.36■□□□□ 0.21
NCKIPSD-203ENST00000415281 RTKN2Q8IZC4 609 aa16.35■□□□□ 0.21
NCKIPSD-203ENST00000415281 GTF2E1P29083 439 aaPredicted RBP16.34■□□□□ 0.21
NCKIPSD-203ENST00000415281 IARSP41252 1262 aaKnown RBP16.34■□□□□ 0.21
NCKIPSD-203ENST00000415281 NEUROD2Q15784 382 aa16.34■□□□□ 0.21
NCKIPSD-203ENST00000415281 COPS6Q7L5N1 327 aa16.34■□□□□ 0.21
NCKIPSD-203ENST00000415281 NECTIN2Q92692 538 aa16.34■□□□□ 0.21
NCKIPSD-203ENST00000415281 CRAMP1Q96RY5 1269 aa16.34■□□□□ 0.21
NCKIPSD-203ENST00000415281 PSMD1Q99460 953 aa16.34■□□□□ 0.21
NCKIPSD-203ENST00000415281 TAF1DQ9H5J8 278 aaPredicted RBP16.34■□□□□ 0.21
NCKIPSD-203ENST00000415281 ITGBL1O95965 494 aaPredicted RBP16.33■□□□□ 0.2
NCKIPSD-203ENST00000415281 CHADLQ6NUI6 762 aa16.33■□□□□ 0.2
NCKIPSD-203ENST00000415281 RUNDC1Q96C34 613 aa16.33■□□□□ 0.2
NCKIPSD-203ENST00000415281 PASKQ96RG2 1323 aa16.33■□□□□ 0.2
NCKIPSD-203ENST00000415281 COL4A1P02462 1669 aa16.33■□□□□ 0.2
NCKIPSD-203ENST00000415281 NLRP10Q86W26 655 aa16.32■□□□□ 0.2
NCKIPSD-203ENST00000415281 XAGE3Q8WTP9 111 aa16.32■□□□□ 0.2
NCKIPSD-203ENST00000415281 PRKRIP1Q9H875 184 aaPredicted RBP16.32■□□□□ 0.2
NCKIPSD-203ENST00000415281 DDX60Q8IY21 1712 aaKnown RBP16.31■□□□□ 0.2
NCKIPSD-203ENST00000415281 ZNF316A6NFI3 1004 aaPredicted RBP16.31■□□□□ 0.2
NCKIPSD-203ENST00000415281 COL13A1Q5TAT6 717 aaPredicted RBP16.31■□□□□ 0.2
NCKIPSD-203ENST00000415281 DDX21Q9NR30 783 aaKnown RBP eCLIP16.31■□□□□ 0.2
NCKIPSD-203ENST00000415281 ZNF853P0CG23 659 aa16.3■□□□□ 0.2
NCKIPSD-203ENST00000415281 TCIRG1Q13488 830 aa16.3■□□□□ 0.2
NCKIPSD-203ENST00000415281 PARP10Q53GL7 1025 aa16.3■□□□□ 0.2
NCKIPSD-203ENST00000415281 TCERG1O14776 1098 aaKnown RBP16.29■□□□□ 0.2
NCKIPSD-203ENST00000415281 LMOD3Q0VAK6 560 aa16.29■□□□□ 0.2
NCKIPSD-203ENST00000415281 AIMP1Q12904 312 aaKnown RBP16.29■□□□□ 0.2
NCKIPSD-203ENST00000415281 PPP1R42Q7Z4L9 355 aa16.29■□□□□ 0.2
NCKIPSD-203ENST00000415281 ZNF428Q96B54 188 aa16.29■□□□□ 0.2
NCKIPSD-203ENST00000415281 RBM17Q96I25 401 aaKnown RBP16.29■□□□□ 0.2
NCKIPSD-203ENST00000415281 UTP14AQ9BVJ6 771 aaKnown RBP16.29■□□□□ 0.2
NCKIPSD-203ENST00000415281 CHPF2Q9P2E5 772 aa16.29■□□□□ 0.2
NCKIPSD-203ENST00000415281 ABCC4O15439 1325 aa16.28■□□□□ 0.2
NCKIPSD-203ENST00000415281 RNF123Q5XPI4 1314 aa16.28■□□□□ 0.2
NCKIPSD-203ENST00000415281 PPEF1O14829 653 aaPredicted RBP16.28■□□□□ 0.2
NCKIPSD-203ENST00000415281 HCLS1P14317 486 aaPredicted RBP16.28■□□□□ 0.2
NCKIPSD-203ENST00000415281 CCDC184Q52MB2 194 aa16.28■□□□□ 0.2
NCKIPSD-203ENST00000415281 CC2D2BQ6DHV5 1058 aa16.28■□□□□ 0.2
NCKIPSD-203ENST00000415281 LDHDQ86WU2 507 aa16.28■□□□□ 0.2
NCKIPSD-203ENST00000415281 RPGRQ92834 1020 aaKnown RBP16.28■□□□□ 0.2
NCKIPSD-203ENST00000415281 GPC2Q8N158 579 aa16.27■□□□□ 0.2
NCKIPSD-203ENST00000415281 NLRP3Q96P20 1036 aa16.27■□□□□ 0.2
NCKIPSD-203ENST00000415281 ISCA1Q9BUE6 129 aa16.27■□□□□ 0.2
NCKIPSD-203ENST00000415281 ATP6V0A2Q9Y487 856 aa16.27■□□□□ 0.2
NCKIPSD-203ENST00000415281 LAS1LQ9Y4W2 734 aaKnown RBP16.27■□□□□ 0.2
NCKIPSD-203ENST00000415281 DUOX1Q9NRD9 1551 aa16.26■□□□□ 0.19
NCKIPSD-203ENST00000415281 IQCA1LA6NCM1 817 aa16.26■□□□□ 0.19
NCKIPSD-203ENST00000415281 EPHX2P34913 555 aa16.26■□□□□ 0.19
NCKIPSD-203ENST00000415281 SCNN1DP51172 638 aa16.26■□□□□ 0.19
NCKIPSD-203ENST00000415281 CFAP44Q96MT7 982 aa16.26■□□□□ 0.19
NCKIPSD-203ENST00000415281 RTFDC1Q9BY42 306 aaPredicted RBP16.26■□□□□ 0.19
NCKIPSD-203ENST00000415281 CREBZFQ9NS37 354 aa16.26■□□□□ 0.19
NCKIPSD-203ENST00000415281 MBIPQ9NS73 344 aa16.26■□□□□ 0.19
NCKIPSD-203ENST00000415281 HACL1Q9UJ83 578 aa16.26■□□□□ 0.19
NCKIPSD-203ENST00000415281 APAF1O14727 1248 aa16.25■□□□□ 0.19
NCKIPSD-203ENST00000415281 FMR1Q06787 632 aaKnown RBP eCLIP16.25■□□□□ 0.19
NCKIPSD-203ENST00000415281 LRRC37AA6NMS7 1700 aa16.25■□□□□ 0.19
NCKIPSD-203ENST00000415281 HOXB7P09629 217 aa16.24■□□□□ 0.19
NCKIPSD-203ENST00000415281 EPS15P42566 896 aa16.24■□□□□ 0.19
NCKIPSD-203ENST00000415281 WDR43Q15061 677 aaKnown RBP eCLIP16.24■□□□□ 0.19
NCKIPSD-203ENST00000415281 DUSP27Q5VZP5 1158 aa16.24■□□□□ 0.19
NCKIPSD-203ENST00000415281 PLBD2Q8NHP8 589 aa16.24■□□□□ 0.19
NCKIPSD-203ENST00000415281 MKRN1Q9UHC7 482 aaKnown RBP16.24■□□□□ 0.19
NCKIPSD-203ENST00000415281 HSPA1AP0DMV8 641 aaKnown RBP16.23■□□□□ 0.19
NCKIPSD-203ENST00000415281 HSPA1BP0DMV9 641 aaKnown RBP16.23■□□□□ 0.19
NCKIPSD-203ENST00000415281 AOC3Q16853 763 aa16.23■□□□□ 0.19
NCKIPSD-203ENST00000415281 GRIPAP1Q4V328 841 aa16.23■□□□□ 0.19
NCKIPSD-203ENST00000415281 EAPPQ56P03 285 aaPredicted RBP16.23■□□□□ 0.19
NCKIPSD-203ENST00000415281 HSP90AB3PQ58FF7 597 aa16.23■□□□□ 0.19
NCKIPSD-203ENST00000415281 HDGFL1Q5TGJ6 251 aa16.23■□□□□ 0.19
NCKIPSD-203ENST00000415281 MAP1SQ66K74 1059 aaPredicted RBP16.23■□□□□ 0.19
NCKIPSD-203ENST00000415281 ANKRD13DQ6ZTN6 518 aa16.23■□□□□ 0.19
NCKIPSD-203ENST00000415281 SP8Q8IXZ3 490 aa16.23■□□□□ 0.19
NCKIPSD-203ENST00000415281 TRMT112Q9UI30 125 aaKnown RBP16.23■□□□□ 0.19
NCKIPSD-203ENST00000415281 ATP5J2-PTCD1G3V325 749 aa16.22■□□□□ 0.19
NCKIPSD-203ENST00000415281 BBOX1O75936 387 aa16.22■□□□□ 0.19
NCKIPSD-203ENST00000415281 CNTROBQ8N137 903 aa16.22■□□□□ 0.19
NCKIPSD-203ENST00000415281 LARGE2Q8N3Y3 721 aa16.22■□□□□ 0.19
NCKIPSD-203ENST00000415281 C8orf58Q8NAV2 365 aa16.22■□□□□ 0.19
NCKIPSD-203ENST00000415281 JDP2Q8WYK2 163 aa16.22■□□□□ 0.19
NCKIPSD-203ENST00000415281 PHAXQ9H814 394 aaKnown RBP16.22■□□□□ 0.19
NCKIPSD-203ENST00000415281 DBF4Q9UBU7 674 aaPredicted RBP16.22■□□□□ 0.19
NCKIPSD-203ENST00000415281 GJA3Q9Y6H8 435 aa16.22■□□□□ 0.19
NCKIPSD-203ENST00000415281 CNTNAP1P78357 1384 aa16.22■□□□□ 0.19
NCKIPSD-203ENST00000415281 SH3TC1Q8TE82 1336 aa16.21■□□□□ 0.19
NCKIPSD-203ENST00000415281 CXCL9Q07325 125 aa16.21■□□□□ 0.19
NCKIPSD-203ENST00000415281 TRIM28Q13263 835 aaKnown RBP16.21■□□□□ 0.19
NCKIPSD-203ENST00000415281 FAM89AQ96GI7 184 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms