RNA–Protein interactions for RNA: ENST00000412256.1

RAB11FIP3-202, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-202ENST00000412256 PPP1R42Q7Z4L9 355 aa18.32■□□□□ 0.52
RAB11FIP3-202ENST00000412256 ZNF34Q8IZ26 560 aa18.32■□□□□ 0.52
RAB11FIP3-202ENST00000412256 GJA3Q9Y6H8 435 aa18.32■□□□□ 0.52
RAB11FIP3-202ENST00000412256 RNF123Q5XPI4 1314 aa18.31■□□□□ 0.52
RAB11FIP3-202ENST00000412256 EIF6P56537 245 aaKnown RBP18.31■□□□□ 0.52
RAB11FIP3-202ENST00000412256 PNMA8AQ86V59 439 aaPredicted RBP18.31■□□□□ 0.52
RAB11FIP3-202ENST00000412256 GPC2Q8N158 579 aa18.31■□□□□ 0.52
RAB11FIP3-202ENST00000412256 TMX4Q9H1E5 349 aaPredicted RBP18.31■□□□□ 0.52
RAB11FIP3-202ENST00000412256 PASKQ96RG2 1323 aa18.3■□□□□ 0.52
RAB11FIP3-202ENST00000412256 TMEM88BA6NKF7 163 aa18.3■□□□□ 0.52
RAB11FIP3-202ENST00000412256 ITGBL1O95965 494 aaPredicted RBP18.3■□□□□ 0.52
RAB11FIP3-202ENST00000412256 LARGE2Q8N3Y3 721 aa18.3■□□□□ 0.52
RAB11FIP3-202ENST00000412256 NECTIN2Q92692 538 aa18.3■□□□□ 0.52
RAB11FIP3-202ENST00000412256 NLRP3Q96P20 1036 aa18.3■□□□□ 0.52
RAB11FIP3-202ENST00000412256 CRAMP1Q96RY5 1269 aa18.3■□□□□ 0.52
RAB11FIP3-202ENST00000412256 ERBB4Q15303 1308 aa18.29■□□□□ 0.52
RAB11FIP3-202ENST00000412256 PPEF1O14829 653 aaPredicted RBP18.29■□□□□ 0.52
RAB11FIP3-202ENST00000412256 NTSR2O95665 410 aa18.29■□□□□ 0.52
RAB11FIP3-202ENST00000412256 ANXA1P04083 346 aa18.29■□□□□ 0.52
RAB11FIP3-202ENST00000412256 GRIPAP1Q4V328 841 aa18.29■□□□□ 0.52
RAB11FIP3-202ENST00000412256 PARP10Q53GL7 1025 aa18.29■□□□□ 0.52
RAB11FIP3-202ENST00000412256 MAP1SQ66K74 1059 aaPredicted RBP18.29■□□□□ 0.52
RAB11FIP3-202ENST00000412256 C3orf67Q6ZVT6 689 aa18.29■□□□□ 0.52
RAB11FIP3-202ENST00000412256 CNTROBQ8N137 903 aa18.29■□□□□ 0.52
RAB11FIP3-202ENST00000412256 UTP14AQ9BVJ6 771 aaKnown RBP18.29■□□□□ 0.52
RAB11FIP3-202ENST00000412256 ARFGEF2Q9Y6D5 1785 aa18.29■□□□□ 0.52
RAB11FIP3-202ENST00000412256 AIMP1Q12904 312 aaKnown RBP18.28■□□□□ 0.52
RAB11FIP3-202ENST00000412256 PDIA6Q15084 440 aa18.28■□□□□ 0.52
RAB11FIP3-202ENST00000412256 RALBP1Q15311 655 aa18.28■□□□□ 0.52
RAB11FIP3-202ENST00000412256 NEUROD2Q15784 382 aa18.28■□□□□ 0.52
RAB11FIP3-202ENST00000412256 LMOD1P29536 600 aaPredicted RBP18.27■□□□□ 0.52
RAB11FIP3-202ENST00000412256 TMPOP42166 694 aaKnown RBP18.27■□□□□ 0.52
RAB11FIP3-202ENST00000412256 LMOD3Q0VAK6 560 aa18.27■□□□□ 0.52
RAB11FIP3-202ENST00000412256 PROSER3Q2NL68 480 aa18.27■□□□□ 0.52
RAB11FIP3-202ENST00000412256 SLC51AQ86UW1 340 aa18.27■□□□□ 0.52
RAB11FIP3-202ENST00000412256 DLG5Q8TDM6 1919 aa18.27■□□□□ 0.51
RAB11FIP3-202ENST00000412256 VEGFBP49765 207 aa18.26■□□□□ 0.51
RAB11FIP3-202ENST00000412256 COPS6Q7L5N1 327 aa18.26■□□□□ 0.51
RAB11FIP3-202ENST00000412256 BABAM1Q9NWV8 329 aa18.26■□□□□ 0.51
RAB11FIP3-202ENST00000412256 LAS1LQ9Y4W2 734 aaKnown RBP18.26■□□□□ 0.51
RAB11FIP3-202ENST00000412256 CNTNAP1P78357 1384 aa18.26■□□□□ 0.51
RAB11FIP3-202ENST00000412256 IBTKQ9P2D0 1353 aaPredicted RBP18.26■□□□□ 0.51
RAB11FIP3-202ENST00000412256 LAMB4A4D0S4 1761 aa18.25■□□□□ 0.51
RAB11FIP3-202ENST00000412256 KDM3BQ7LBC6 1761 aa18.25■□□□□ 0.51
RAB11FIP3-202ENST00000412256 SLC10A5Q5PT55 438 aa18.25■□□□□ 0.51
RAB11FIP3-202ENST00000412256 LRP10Q7Z4F1 713 aa18.25■□□□□ 0.51
RAB11FIP3-202ENST00000412256 NIM1KQ8IY84 436 aa18.25■□□□□ 0.51
RAB11FIP3-202ENST00000412256 CCDC146Q8IYE0 955 aa18.25■□□□□ 0.51
RAB11FIP3-202ENST00000412256 SCN4AP35499 1836 aa18.25■□□□□ 0.51
RAB11FIP3-202ENST00000412256 NUP98P52948 1817 aa18.25■□□□□ 0.51
RAB11FIP3-202ENST00000412256 PPIP5K2O43314 1243 aa18.24■□□□□ 0.51
RAB11FIP3-202ENST00000412256 EPS15P42566 896 aa18.24■□□□□ 0.51
RAB11FIP3-202ENST00000412256 XAGE3Q8WTP9 111 aa18.24■□□□□ 0.51
RAB11FIP3-202ENST00000412256 ATP6V0A2Q9Y487 856 aa18.24■□□□□ 0.51
RAB11FIP3-202ENST00000412256 HCLS1P14317 486 aaPredicted RBP18.23■□□□□ 0.51
RAB11FIP3-202ENST00000412256 DDX10Q13206 875 aaKnown RBP18.23■□□□□ 0.51
RAB11FIP3-202ENST00000412256 AOC3Q16853 763 aa18.23■□□□□ 0.51
RAB11FIP3-202ENST00000412256 DEFB115Q30KQ5 88 aa18.23■□□□□ 0.51
RAB11FIP3-202ENST00000412256 HSP90AB3PQ58FF7 597 aa18.23■□□□□ 0.51
RAB11FIP3-202ENST00000412256 AIDAQ96BJ3 306 aa18.23■□□□□ 0.51
RAB11FIP3-202ENST00000412256 ABT1Q9ULW3 272 aaKnown RBP18.23■□□□□ 0.51
RAB11FIP3-202ENST00000412256 FOXN1O15353 648 aa18.22■□□□□ 0.51
RAB11FIP3-202ENST00000412256 BBOX1O75936 387 aa18.22■□□□□ 0.51
RAB11FIP3-202ENST00000412256 NLRP10Q86W26 655 aa18.22■□□□□ 0.51
RAB11FIP3-202ENST00000412256 ZNF428Q96B54 188 aa18.22■□□□□ 0.51
RAB11FIP3-202ENST00000412256 TRMT112Q9UI30 125 aaKnown RBP18.22■□□□□ 0.51
RAB11FIP3-202ENST00000412256 RIC1Q4ADV7 1423 aa18.22■□□□□ 0.51
RAB11FIP3-202ENST00000412256 SNED1Q8TER0 1413 aa18.22■□□□□ 0.51
RAB11FIP3-202ENST00000412256 SCNN1DP51172 638 aa18.21■□□□□ 0.51
RAB11FIP3-202ENST00000412256 TCIRG1Q13488 830 aa18.21■□□□□ 0.51
RAB11FIP3-202ENST00000412256 KRT24Q2M2I5 525 aa18.21■□□□□ 0.51
RAB11FIP3-202ENST00000412256 ABCC4O15439 1325 aa18.21■□□□□ 0.51
RAB11FIP3-202ENST00000412256 CHL1O00533 1208 aa18.2■□□□□ 0.5
RAB11FIP3-202ENST00000412256 WDR43Q15061 677 aaKnown RBP eCLIP18.2■□□□□ 0.5
RAB11FIP3-202ENST00000412256 DPP8Q6V1X1 898 aaPredicted RBP18.2■□□□□ 0.5
RAB11FIP3-202ENST00000412256 DDX46Q7L014 1031 aaKnown RBP18.2■□□□□ 0.5
RAB11FIP3-202ENST00000412256 SUPT20HQ8NEM7 779 aa18.2■□□□□ 0.5
RAB11FIP3-202ENST00000412256 DDX21Q9NR30 783 aaKnown RBP eCLIP18.2■□□□□ 0.5
RAB11FIP3-202ENST00000412256 USP50Q70EL3 339 aaPredicted RBP18.19■□□□□ 0.5
RAB11FIP3-202ENST00000412256 SP8Q8IXZ3 490 aa18.19■□□□□ 0.5
RAB11FIP3-202ENST00000412256 MPNDQ8N594 471 aa18.19■□□□□ 0.5
RAB11FIP3-202ENST00000412256 VPS33BQ9H267 617 aa18.19■□□□□ 0.5
RAB11FIP3-202ENST00000412256 ZNRF3Q9ULT6 936 aa18.19■□□□□ 0.5
RAB11FIP3-202ENST00000412256 COL4A5P29400 1685 aa18.18■□□□□ 0.5
RAB11FIP3-202ENST00000412256 RASSF10A6NK89 507 aa18.18■□□□□ 0.5
RAB11FIP3-202ENST00000412256 CTCFP49711 727 aaPredicted RBP18.18■□□□□ 0.5
RAB11FIP3-202ENST00000412256 FMR1Q06787 632 aaKnown RBP eCLIP18.18■□□□□ 0.5
RAB11FIP3-202ENST00000412256 CXCL9Q07325 125 aa18.18■□□□□ 0.5
RAB11FIP3-202ENST00000412256 PAXIP1Q6ZW49 1069 aaPredicted RBP18.18■□□□□ 0.5
RAB11FIP3-202ENST00000412256 RUNDC1Q96C34 613 aa18.18■□□□□ 0.5
RAB11FIP3-202ENST00000412256 SH3TC1Q8TE82 1336 aa18.18■□□□□ 0.5
RAB11FIP3-202ENST00000412256 MYBBP1AQ9BQG0 1328 aaKnown RBP18.18■□□□□ 0.5
RAB11FIP3-202ENST00000412256 WBP1LQ9NX94 342 aa18.17■□□□□ 0.5
RAB11FIP3-202ENST00000412256 GPRC5DQ9NZD1 345 aa18.17■□□□□ 0.5
RAB11FIP3-202ENST00000412256 CHPF2Q9P2E5 772 aa18.17■□□□□ 0.5
RAB11FIP3-202ENST00000412256 TRIM35Q9UPQ4 493 aa18.17■□□□□ 0.5
RAB11FIP3-202ENST00000412256 WDR33Q9C0J8 1336 aaKnown RBP18.17■□□□□ 0.5
RAB11FIP3-202ENST00000412256 TRAF5O00463 557 aa18.16■□□□□ 0.5
RAB11FIP3-202ENST00000412256 GRM1Q13255 1194 aa18.16■□□□□ 0.5
RAB11FIP3-202ENST00000412256 HDGFL1Q5TGJ6 251 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms