RNA–Protein interactions for RNA: ENST00000412227.6

CROT-202, Transcript of carnitine O-octanoyltransferase, humanhuman

TSL 1 (best) BASIC

Gene CROT, Length 1,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROT-202ENST00000412227 ANXA1P04083 346 aa28.79■■■□□ 2.2
CROT-202ENST00000412227 HOXA10P31260 410 aaPredicted RBP28.79■■■□□ 2.2
CROT-202ENST00000412227 PARP10Q53GL7 1025 aa28.79■■■□□ 2.2
CROT-202ENST00000412227 CC2D2BQ6DHV5 1058 aa28.79■■■□□ 2.2
CROT-202ENST00000412227 LRP10Q7Z4F1 713 aa28.79■■■□□ 2.2
CROT-202ENST00000412227 PSMD1Q99460 953 aa28.79■■■□□ 2.2
CROT-202ENST00000412227 PROSER3Q2NL68 480 aa28.78■■■□□ 2.2
CROT-202ENST00000412227 RBM17Q96I25 401 aaKnown RBP28.78■■■□□ 2.2
CROT-202ENST00000412227 TAF1DQ9H5J8 278 aaPredicted RBP28.78■■■□□ 2.2
CROT-202ENST00000412227 NECTIN2Q92692 538 aa28.77■■■□□ 2.2
CROT-202ENST00000412227 ANKRD36CQ5JPF3 1778 aa28.77■■■□□ 2.2
CROT-202ENST00000412227 FZD9O00144 591 aa28.76■■■□□ 2.19
CROT-202ENST00000412227 WDR43Q15061 677 aaKnown RBP eCLIP28.76■■■□□ 2.19
CROT-202ENST00000412227 JDP2Q8WYK2 163 aa28.76■■■□□ 2.19
CROT-202ENST00000412227 CRAMP1Q96RY5 1269 aa28.76■■■□□ 2.19
CROT-202ENST00000412227 SNED1Q8TER0 1413 aa28.76■■■□□ 2.19
CROT-202ENST00000412227 LDHDQ86WU2 507 aa28.75■■■□□ 2.19
CROT-202ENST00000412227 RUNDC1Q96C34 613 aa28.75■■■□□ 2.19
CROT-202ENST00000412227 UTP14AQ9BVJ6 771 aaKnown RBP28.75■■■□□ 2.19
CROT-202ENST00000412227 AIMP1Q12904 312 aaKnown RBP28.74■■■□□ 2.19
CROT-202ENST00000412227 NLRP3Q96P20 1036 aa28.74■■■□□ 2.19
CROT-202ENST00000412227 HACL1Q9UJ83 578 aa28.74■■■□□ 2.19
CROT-202ENST00000412227 LAS1LQ9Y4W2 734 aaKnown RBP28.74■■■□□ 2.19
CROT-202ENST00000412227 TCERG1O14776 1098 aaKnown RBP28.73■■■□□ 2.19
CROT-202ENST00000412227 PPEF1O14829 653 aaPredicted RBP28.73■■■□□ 2.19
CROT-202ENST00000412227 GRIPAP1Q4V328 841 aa28.73■■■□□ 2.19
CROT-202ENST00000412227 EAPPQ56P03 285 aaPredicted RBP28.73■■■□□ 2.19
CROT-202ENST00000412227 C3orf67Q6ZVT6 689 aa28.73■■■□□ 2.19
CROT-202ENST00000412227 COPS6Q7L5N1 327 aa28.73■■■□□ 2.19
CROT-202ENST00000412227 CREBZFQ9NS37 354 aa28.73■■■□□ 2.19
CROT-202ENST00000412227 CHL1O00533 1208 aa28.72■■■□□ 2.19
CROT-202ENST00000412227 XAGE3Q8WTP9 111 aa28.72■■■□□ 2.19
CROT-202ENST00000412227 PCNTO95613 3336 aa28.72■■■□□ 2.19
CROT-202ENST00000412227 GPC2Q8N158 579 aa28.71■■■□□ 2.19
CROT-202ENST00000412227 RNF123Q5XPI4 1314 aa28.7■■■□□ 2.19
CROT-202ENST00000412227 LAMB2P55268 1798 aa28.7■■■□□ 2.19
CROT-202ENST00000412227 EPHX2P34913 555 aa28.7■■■□□ 2.18
CROT-202ENST00000412227 KRT24Q2M2I5 525 aa28.7■■■□□ 2.18
CROT-202ENST00000412227 HSP90AB3PQ58FF7 597 aa28.7■■■□□ 2.18
CROT-202ENST00000412227 SLC10A5Q5PT55 438 aa28.7■■■□□ 2.18
CROT-202ENST00000412227 TRIM35Q9UPQ4 493 aa28.7■■■□□ 2.18
CROT-202ENST00000412227 CLEC11AQ9Y240 323 aa28.7■■■□□ 2.18
CROT-202ENST00000412227 EIF6P56537 245 aaKnown RBP28.69■■■□□ 2.18
CROT-202ENST00000412227 TMX4Q9H1E5 349 aaPredicted RBP28.69■■■□□ 2.18
CROT-202ENST00000412227 DDX21Q9NR30 783 aaKnown RBP eCLIP28.69■■■□□ 2.18
CROT-202ENST00000412227 ADAMTS8Q9UP79 889 aa28.69■■■□□ 2.18
CROT-202ENST00000412227 PNMA8AQ86V59 439 aaPredicted RBP28.68■■■□□ 2.18
CROT-202ENST00000412227 LARGE2Q8N3Y3 721 aa28.68■■■□□ 2.18
CROT-202ENST00000412227 COL4A5P29400 1685 aa28.67■■■□□ 2.18
CROT-202ENST00000412227 COL13A1Q5TAT6 717 aaPredicted RBP28.67■■■□□ 2.18
CROT-202ENST00000412227 SLC51AQ86UW1 340 aa28.67■■■□□ 2.18
CROT-202ENST00000412227 GJA3Q9Y6H8 435 aa28.67■■■□□ 2.18
CROT-202ENST00000412227 PASKQ96RG2 1323 aa28.67■■■□□ 2.18
CROT-202ENST00000412227 ADAMTSL1Q8N6G6 1762 aa28.66■■■□□ 2.18
CROT-202ENST00000412227 HSPA1AP0DMV8 641 aaKnown RBP28.66■■■□□ 2.18
CROT-202ENST00000412227 HSPA1BP0DMV9 641 aaKnown RBP28.66■■■□□ 2.18
CROT-202ENST00000412227 TCIRG1Q13488 830 aa28.66■■■□□ 2.18
CROT-202ENST00000412227 NLRP10Q86W26 655 aa28.66■■■□□ 2.18
CROT-202ENST00000412227 MKRN1Q9UHC7 482 aaKnown RBP28.66■■■□□ 2.18
CROT-202ENST00000412227 CHPF2Q9P2E5 772 aa28.65■■■□□ 2.18
CROT-202ENST00000412227 TRMT112Q9UI30 125 aaKnown RBP28.65■■■□□ 2.18
CROT-202ENST00000412227 HCLS1P14317 486 aaPredicted RBP28.64■■■□□ 2.18
CROT-202ENST00000412227 HDGFL1Q5TGJ6 251 aa28.64■■■□□ 2.18
CROT-202ENST00000412227 ATP6V0A2Q9Y487 856 aa28.64■■■□□ 2.18
CROT-202ENST00000412227 ABCC4O15439 1325 aa28.64■■■□□ 2.17
CROT-202ENST00000412227 TAF1P21675 1872 aa28.63■■■□□ 2.17
CROT-202ENST00000412227 ITGBL1O95965 494 aaPredicted RBP28.63■■■□□ 2.17
CROT-202ENST00000412227 LMOD1P29536 600 aaPredicted RBP28.62■■■□□ 2.17
CROT-202ENST00000412227 NIM1KQ8IY84 436 aa28.62■■■□□ 2.17
CROT-202ENST00000412227 PPIP5K2O43314 1243 aa28.61■■■□□ 2.17
CROT-202ENST00000412227 HOXB7P09629 217 aa28.61■■■□□ 2.17
CROT-202ENST00000412227 SH3TC1Q8TE82 1336 aa28.61■■■□□ 2.17
CROT-202ENST00000412227 TMEM88BA6NKF7 163 aa28.6■■■□□ 2.17
CROT-202ENST00000412227 BBOX1O75936 387 aa28.6■■■□□ 2.17
CROT-202ENST00000412227 AOC3Q16853 763 aa28.6■■■□□ 2.17
CROT-202ENST00000412227 MAP1SQ66K74 1059 aaPredicted RBP28.6■■■□□ 2.17
CROT-202ENST00000412227 CNTROBQ8N137 903 aa28.6■■■□□ 2.17
CROT-202ENST00000412227 CFAP44Q96MT7 982 aa28.6■■■□□ 2.17
CROT-202ENST00000412227 PRKRIP1Q9H875 184 aaPredicted RBP28.6■■■□□ 2.17
CROT-202ENST00000412227 DDX46Q7L014 1031 aaKnown RBP28.59■■■□□ 2.17
CROT-202ENST00000412227 SUPT20HQ8NEM7 779 aa28.59■■■□□ 2.17
CROT-202ENST00000412227 PLBD2Q8NHP8 589 aa28.59■■■□□ 2.17
CROT-202ENST00000412227 VPS33BQ9H267 617 aa28.59■■■□□ 2.17
CROT-202ENST00000412227 DBF4Q9UBU7 674 aaPredicted RBP28.59■■■□□ 2.17
CROT-202ENST00000412227 LTBP1Q14766 1721 aa28.59■■■□□ 2.17
CROT-202ENST00000412227 CNTNAP1P78357 1384 aa28.59■■■□□ 2.17
CROT-202ENST00000412227 ANKRD13DQ6ZTN6 518 aa28.58■■■□□ 2.17
CROT-202ENST00000412227 SP8Q8IXZ3 490 aa28.58■■■□□ 2.17
CROT-202ENST00000412227 ZNF428Q96B54 188 aa28.58■■■□□ 2.17
CROT-202ENST00000412227 DUSP27Q5VZP5 1158 aa28.57■■■□□ 2.16
CROT-202ENST00000412227 EPS15P42566 896 aa28.56■■■□□ 2.16
CROT-202ENST00000412227 SCNN1DP51172 638 aa28.56■■■□□ 2.16
CROT-202ENST00000412227 DPP8Q6V1X1 898 aaPredicted RBP28.56■■■□□ 2.16
CROT-202ENST00000412227 DDX60Q8IY21 1712 aaKnown RBP28.56■■■□□ 2.16
CROT-202ENST00000412227 GRAPQ13588 217 aa28.55■■■□□ 2.16
CROT-202ENST00000412227 TNS4Q8IZW8 715 aa28.55■■■□□ 2.16
CROT-202ENST00000412227 MPNDQ8N594 471 aa28.55■■■□□ 2.16
CROT-202ENST00000412227 GRAPLQ8TC17 118 aaPredicted RBP28.55■■■□□ 2.16
CROT-202ENST00000412227 RTFDC1Q9BY42 306 aaPredicted RBP28.55■■■□□ 2.16
CROT-202ENST00000412227 MBIPQ9NS73 344 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms