RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 MFSD6Q6ZSS7 791 aa9.68□□□□□ -0.86
SCN9A-203ENST00000409672 CCDC63Q8NA47 563 aa9.68□□□□□ -0.86
SCN9A-203ENST00000409672 HAUS7Q99871 368 aa9.68□□□□□ -0.86
SCN9A-203ENST00000409672 ANKRD24Q8TF21 1146 aa9.68□□□□□ -0.86
SCN9A-203ENST00000409672 K7ELQ4 463 aaPredicted RBP9.68□□□□□ -0.86
SCN9A-203ENST00000409672 KIF5BP33176 963 aa9.68□□□□□ -0.86
SCN9A-203ENST00000409672 IFIT1BQ5T764 474 aaKnown RBP9.68□□□□□ -0.86
SCN9A-203ENST00000409672 VPS36Q86VN1 386 aa9.68□□□□□ -0.86
SCN9A-203ENST00000409672 SYCE3A1L190 88 aa9.68□□□□□ -0.86
SCN9A-203ENST00000409672 EEF2P13639 858 aaKnown RBP9.68□□□□□ -0.86
SCN9A-203ENST00000409672 MCM2P49736 904 aa9.68□□□□□ -0.86
SCN9A-203ENST00000409672 MIGA1Q8NAN2 632 aa9.68□□□□□ -0.86
SCN9A-203ENST00000409672 NSD3Q9BZ95 1437 aa9.68□□□□□ -0.86
SCN9A-203ENST00000409672 CHST3Q7LGC8 479 aa9.68□□□□□ -0.86
SCN9A-203ENST00000409672 KIF1BPQ96EK5 621 aa9.68□□□□□ -0.86
SCN9A-203ENST00000409672 GDPD2Q9HCC8 539 aa9.68□□□□□ -0.86
SCN9A-203ENST00000409672 NDC80O14777 642 aa9.68□□□□□ -0.86
SCN9A-203ENST00000409672 ZC3H12CQ9C0D7 883 aaKnown RBP9.68□□□□□ -0.86
SCN9A-203ENST00000409672 CCDC152Q4G0S7 254 aa9.67□□□□□ -0.86
SCN9A-203ENST00000409672 TCP11L1Q9NUJ3 509 aa9.67□□□□□ -0.86
SCN9A-203ENST00000409672 IRX5P78411 483 aaPredicted RBP9.67□□□□□ -0.86
SCN9A-203ENST00000409672 FAM83GA6ND36 823 aa9.67□□□□□ -0.86
SCN9A-203ENST00000409672 BACH1O14867 736 aa9.67□□□□□ -0.86
SCN9A-203ENST00000409672 PPP2R5DQ14738 602 aa9.67□□□□□ -0.86
SCN9A-203ENST00000409672 RAB3IL1Q8TBN0 382 aa9.67□□□□□ -0.86
SCN9A-203ENST00000409672 CETN1Q12798 172 aa9.67□□□□□ -0.86
SCN9A-203ENST00000409672 CLSTN2Q9H4D0 955 aa9.67□□□□□ -0.86
SCN9A-203ENST00000409672 GPHNQ9NQX3 736 aaPredicted RBP9.67□□□□□ -0.86
SCN9A-203ENST00000409672 RNF216Q9NWF9 866 aaPredicted RBP9.67□□□□□ -0.86
SCN9A-203ENST00000409672 SMTNL1A8MU46 457 aa9.67□□□□□ -0.86
SCN9A-203ENST00000409672 IQCEQ6IPM2 695 aa9.67□□□□□ -0.86
SCN9A-203ENST00000409672 GIGYF2Q6Y7W6 1299 aaKnown RBP9.67□□□□□ -0.86
SCN9A-203ENST00000409672 EMILIN1Q9Y6C2 1016 aa9.67□□□□□ -0.86
SCN9A-203ENST00000409672 CCDC7Q96M83 1385 aa9.67□□□□□ -0.86
SCN9A-203ENST00000409672 DDX39AO00148 427 aaKnown RBP9.67□□□□□ -0.86
SCN9A-203ENST00000409672 DDB1Q16531 1140 aa9.67□□□□□ -0.86
SCN9A-203ENST00000409672 NACA2Q9H009 215 aa9.67□□□□□ -0.86
SCN9A-203ENST00000409672 ZSWIM4Q9H7M6 989 aa9.67□□□□□ -0.86
SCN9A-203ENST00000409672 SLC4A4Q9Y6R1 1079 aa9.67□□□□□ -0.86
SCN9A-203ENST00000409672 GABPAQ06546 454 aa9.67□□□□□ -0.86
SCN9A-203ENST00000409672 RASA3Q14644 834 aa9.67□□□□□ -0.86
SCN9A-203ENST00000409672 RNF187Q5TA31 235 aaPredicted RBP9.67□□□□□ -0.86
SCN9A-203ENST00000409672 RTCBQ9Y3I0 505 aaKnown RBP9.67□□□□□ -0.86
SCN9A-203ENST00000409672 TBCAO75347 108 aaKnown RBP9.67□□□□□ -0.86
SCN9A-203ENST00000409672 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.67□□□□□ -0.86
SCN9A-203ENST00000409672 ABL1P00519 1130 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 KIF4BQ2VIQ3 1234 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 SMARCC2Q8TAQ2 1214 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 ODF2LQ9ULJ1 636 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 SYNJ2O15056 1496 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 STK25O00506 426 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 RNF34Q969K3 372 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 CCDC61Q9Y6R9 512 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 AKNAQ7Z591 1439 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 TMPOP42166 694 aaKnown RBP9.66□□□□□ -0.86
SCN9A-203ENST00000409672 TMCO3Q6UWJ1 677 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 GSTA5Q7RTV2 222 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 CRNKL1Q9BZJ0 848 aaKnown RBP9.66□□□□□ -0.86
SCN9A-203ENST00000409672 ZWINTO95229 277 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 LMTK3Q96Q04 1460 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 CCDC196A0A1B0GTZ2 297 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 KRT32Q14532 448 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 PTGS1P23219 599 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 TCP10Q12799 353 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 CCDC50Q8IVM0 306 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 CCDC65Q8IXS2 484 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 FAM107BQ9H098 131 aa9.66□□□□□ -0.86
SCN9A-203ENST00000409672 RAB11FIP3O75154 756 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 PPARDQ03181 441 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 NFE2L2Q16236 605 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 NLRP3Q96P20 1036 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 PICK1Q9NRD5 415 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 MBD3O95983 291 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 FERMT1Q9BQL6 677 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 TOP2AP11388 1531 aaKnown RBP9.65□□□□□ -0.86
SCN9A-203ENST00000409672 A0A1W2PRG0 241 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 URI1O94763 535 aaPredicted RBP9.65□□□□□ -0.86
SCN9A-203ENST00000409672 FAM47CQ5HY64 1035 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 DMRT2Q9Y5R5 561 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 GNPATO15228 680 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 CHMP2AO43633 222 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 KMT5BQ4FZB7 885 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 CRACR2AQ9BSW2 395 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 NCKAP5LQ9HCH0 1330 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 ATAD2BQ9ULI0 1458 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 KRT9P35527 623 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 MVPQ14764 893 aaKnown RBP9.65□□□□□ -0.86
SCN9A-203ENST00000409672 IKBKGQ9Y6K9 419 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 MSH6P52701 1360 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 POLR3GO15318 223 aaPredicted RBP9.65□□□□□ -0.86
SCN9A-203ENST00000409672 METAP2P50579 478 aaKnown RBP eCLIP9.65□□□□□ -0.86
SCN9A-203ENST00000409672 ALS2CR12Q96Q35 445 aa9.65□□□□□ -0.86
SCN9A-203ENST00000409672 EIF3JO75822 258 aaKnown RBP9.65□□□□□ -0.87
SCN9A-203ENST00000409672 ACTN2P35609 894 aa9.65□□□□□ -0.87
SCN9A-203ENST00000409672 UBA7P41226 1012 aa9.65□□□□□ -0.87
SCN9A-203ENST00000409672 FGFR1OPO95684 399 aaKnown RBP9.65□□□□□ -0.87
SCN9A-203ENST00000409672 TOP1P11387 765 aaKnown RBP9.65□□□□□ -0.87
SCN9A-203ENST00000409672 ZKSCAN3Q9BRR0 538 aa9.65□□□□□ -0.87
SCN9A-203ENST00000409672 USP16Q9Y5T5 823 aa9.65□□□□□ -0.87
SCN9A-203ENST00000409672 CCDC117Q8IWD4 279 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 493.5 ms