RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 INCENPQ9NQS7 918 aa15.86■□□□□ 0.13
VAPA-202ENST00000400000 TSPY3P0CV98 308 aa15.86■□□□□ 0.13
VAPA-202ENST00000400000 TSPY8P0CW00 308 aa15.86■□□□□ 0.13
VAPA-202ENST00000400000 ATP2B3Q16720 1220 aa15.86■□□□□ 0.13
VAPA-202ENST00000400000 MFSD6Q6ZSS7 791 aa15.86■□□□□ 0.13
VAPA-202ENST00000400000 UIMC1Q96RL1 719 aa15.86■□□□□ 0.13
VAPA-202ENST00000400000 PKD2L1Q9P0L9 805 aa15.86■□□□□ 0.13
VAPA-202ENST00000400000 CWC25Q9NXE8 425 aaPredicted RBP15.85■□□□□ 0.13
VAPA-202ENST00000400000 KIAA1107Q9UPP5 1409 aa15.85■□□□□ 0.13
VAPA-202ENST00000400000 METAP2P50579 478 aaKnown RBP eCLIP15.85■□□□□ 0.13
VAPA-202ENST00000400000 ANO10Q9NW15 660 aa15.85■□□□□ 0.13
VAPA-202ENST00000400000 TFCP2L1Q9NZI6 479 aa15.85■□□□□ 0.13
VAPA-202ENST00000400000 PLIN2Q99541 437 aa15.85■□□□□ 0.13
VAPA-202ENST00000400000 APBB1IPQ7Z5R6 666 aaPredicted RBP15.85■□□□□ 0.13
VAPA-202ENST00000400000 CASKIN1Q8WXD9 1431 aa15.85■□□□□ 0.13
VAPA-202ENST00000400000 EHMT1Q9H9B1 1298 aa15.85■□□□□ 0.13
VAPA-202ENST00000400000 PI4KAP2A4QPH2 592 aa15.85■□□□□ 0.13
VAPA-202ENST00000400000 PI4KAP1Q8N8J0 262 aa15.85■□□□□ 0.13
VAPA-202ENST00000400000 ZNF830Q96NB3 372 aaPredicted RBP15.85■□□□□ 0.13
VAPA-202ENST00000400000 CCDC196A0A1B0GTZ2 297 aa15.84■□□□□ 0.13
VAPA-202ENST00000400000 VPS36Q86VN1 386 aa15.84■□□□□ 0.13
VAPA-202ENST00000400000 PDCL2Q8N4E4 241 aa15.84■□□□□ 0.13
VAPA-202ENST00000400000 PTGS1P23219 599 aa15.84■□□□□ 0.13
VAPA-202ENST00000400000 HSPA2P54652 639 aa15.84■□□□□ 0.13
VAPA-202ENST00000400000 PROCA1Q8NCQ7 364 aaPredicted RBP15.84■□□□□ 0.13
VAPA-202ENST00000400000 SETDB2Q96T68 719 aa15.84■□□□□ 0.13
VAPA-202ENST00000400000 RAB34Q9BZG1 259 aa15.84■□□□□ 0.13
VAPA-202ENST00000400000 DNAI2Q9GZS0 605 aa15.84■□□□□ 0.13
VAPA-202ENST00000400000 HOMER2Q9NSB8 354 aa15.84■□□□□ 0.13
VAPA-202ENST00000400000 ATAD2Q6PL18 1390 aa15.84■□□□□ 0.13
VAPA-202ENST00000400000 PRKG1Q13976 671 aa15.84■□□□□ 0.13
VAPA-202ENST00000400000 MAATS1Q7Z4T9 603 aa15.84■□□□□ 0.13
VAPA-202ENST00000400000 HELBQ8NG08 1087 aaPredicted RBP15.84■□□□□ 0.13
VAPA-202ENST00000400000 JADE2Q9NQC1 790 aa15.84■□□□□ 0.13
VAPA-202ENST00000400000 STAC3Q96MF2 364 aa15.84■□□□□ 0.13
VAPA-202ENST00000400000 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.84■□□□□ 0.13
VAPA-202ENST00000400000 HLA-DOAP06340 250 aa15.83■□□□□ 0.13
VAPA-202ENST00000400000 CYP7A1P22680 504 aa15.83■□□□□ 0.13
VAPA-202ENST00000400000 CCDC183Q5T5S1 534 aa15.83■□□□□ 0.12
VAPA-202ENST00000400000 IARSP41252 1262 aaKnown RBP15.83■□□□□ 0.12
VAPA-202ENST00000400000 CDC5LQ99459 802 aaKnown RBP15.83■□□□□ 0.12
VAPA-202ENST00000400000 FLIIQ13045 1269 aa15.82■□□□□ 0.12
VAPA-202ENST00000400000 SLF2Q8IX21 1173 aa15.82■□□□□ 0.12
VAPA-202ENST00000400000 TCP11L1Q9NUJ3 509 aa15.82■□□□□ 0.12
VAPA-202ENST00000400000 MRVI1Q9Y6F6 885 aa15.82■□□□□ 0.12
VAPA-202ENST00000400000 SLC4A4Q9Y6R1 1079 aa15.82■□□□□ 0.12
VAPA-202ENST00000400000 PHACTR2O75167 634 aa15.82■□□□□ 0.12
VAPA-202ENST00000400000 AMOTQ4VCS5 1084 aa15.82■□□□□ 0.12
VAPA-202ENST00000400000 PPP1R42Q7Z4L9 355 aa15.82■□□□□ 0.12
VAPA-202ENST00000400000 HYPKQ9NX55 129 aa15.82■□□□□ 0.12
VAPA-202ENST00000400000 PDE4BQ07343 736 aa15.82■□□□□ 0.12
VAPA-202ENST00000400000 ORC3Q9UBD5 711 aaPredicted RBP15.82■□□□□ 0.12
VAPA-202ENST00000400000 EPRSP07814 1512 aaKnown RBP15.82■□□□□ 0.12
VAPA-202ENST00000400000 RXRAP19793 462 aa15.82■□□□□ 0.12
VAPA-202ENST00000400000 MIGA1Q8NAN2 632 aa15.82■□□□□ 0.12
VAPA-202ENST00000400000 LRRC59Q96AG4 307 aaKnown RBP15.82■□□□□ 0.12
VAPA-202ENST00000400000 CHPF2Q9P2E5 772 aa15.82■□□□□ 0.12
VAPA-202ENST00000400000 RARSP54136 660 aaKnown RBP15.81■□□□□ 0.12
VAPA-202ENST00000400000 CCDC24Q8N4L8 307 aa15.81■□□□□ 0.12
VAPA-202ENST00000400000 ADGRF5Q8IZF2 1346 aa15.81■□□□□ 0.12
VAPA-202ENST00000400000 MARCKSP29966 332 aaPredicted RBP15.81■□□□□ 0.12
VAPA-202ENST00000400000 CD109Q6YHK3 1445 aa15.81■□□□□ 0.12
VAPA-202ENST00000400000 YEATS4O95619 227 aa15.81■□□□□ 0.12
VAPA-202ENST00000400000 STAMBPO95630 424 aa15.81■□□□□ 0.12
VAPA-202ENST00000400000 NIP7Q9Y221 180 aaKnown RBP eCLIP15.81■□□□□ 0.12
VAPA-202ENST00000400000 BAG3O95817 575 aa15.81■□□□□ 0.12
VAPA-202ENST00000400000 PPARDQ03181 441 aa15.81■□□□□ 0.12
VAPA-202ENST00000400000 GRIPAP1Q4V328 841 aa15.81■□□□□ 0.12
VAPA-202ENST00000400000 USO1O60763 962 aaKnown RBP15.8■□□□□ 0.12
VAPA-202ENST00000400000 UBA7P41226 1012 aa15.8■□□□□ 0.12
VAPA-202ENST00000400000 IFIT1BQ5T764 474 aaKnown RBP15.8■□□□□ 0.12
VAPA-202ENST00000400000 RNF41Q9H4P4 317 aaPredicted RBP15.8■□□□□ 0.12
VAPA-202ENST00000400000 ERICH3Q5RHP9 1530 aa15.8■□□□□ 0.12
VAPA-202ENST00000400000 GIMAP6Q6P9H5 292 aa15.8■□□□□ 0.12
VAPA-202ENST00000400000 MTERF4Q7Z6M4 381 aaKnown RBP15.8■□□□□ 0.12
VAPA-202ENST00000400000 PABPN1LA6NDY0 278 aaKnown RBP15.8■□□□□ 0.12
VAPA-202ENST00000400000 WASLO00401 505 aaPredicted RBP15.8■□□□□ 0.12
VAPA-202ENST00000400000 IFNL2Q8IZJ0 200 aa15.8■□□□□ 0.12
VAPA-202ENST00000400000 TRIM47Q96LD4 638 aa15.8■□□□□ 0.12
VAPA-202ENST00000400000 SHTN1A0MZ66 631 aa15.8■□□□□ 0.12
VAPA-202ENST00000400000 GIMAP7Q8NHV1 300 aa15.8■□□□□ 0.12
VAPA-202ENST00000400000 EXOC1Q9NV70 894 aa15.8■□□□□ 0.12
VAPA-202ENST00000400000 CCDC174Q6PII3 467 aa15.79■□□□□ 0.12
VAPA-202ENST00000400000 DBF4Q9UBU7 674 aaPredicted RBP15.79■□□□□ 0.12
VAPA-202ENST00000400000 MRC2Q9UBG0 1479 aa15.79■□□□□ 0.12
VAPA-202ENST00000400000 PAFAH1B1P43034 410 aa15.79■□□□□ 0.12
VAPA-202ENST00000400000 SAP30BPQ9UHR5 308 aaKnown RBP15.79■□□□□ 0.12
VAPA-202ENST00000400000 FGFR1OPO95684 399 aaKnown RBP15.79■□□□□ 0.12
VAPA-202ENST00000400000 LIMCH1Q9UPQ0 1083 aa15.79■□□□□ 0.12
VAPA-202ENST00000400000 TBCAO75347 108 aaKnown RBP15.79■□□□□ 0.12
VAPA-202ENST00000400000 SMIM23A6NLE4 172 aa15.78■□□□□ 0.12
VAPA-202ENST00000400000 ZSCAN12O43309 604 aa15.78■□□□□ 0.12
VAPA-202ENST00000400000 RRAGBQ5VZM2 374 aa15.78■□□□□ 0.12
VAPA-202ENST00000400000 PPP1R14CQ8TAE6 165 aa15.78■□□□□ 0.12
VAPA-202ENST00000400000 PA2G4Q9UQ80 394 aaKnown RBP15.78■□□□□ 0.12
VAPA-202ENST00000400000 WDR97A6NE52 1622 aa15.78■□□□□ 0.12
VAPA-202ENST00000400000 KLF18A0A0U1RQI7 1052 aa15.78■□□□□ 0.12
VAPA-202ENST00000400000 TCHPQ9BT92 498 aa15.78■□□□□ 0.12
VAPA-202ENST00000400000 NEK1Q96PY6 1258 aa15.78■□□□□ 0.12
VAPA-202ENST00000400000 ARAP1Q96P48 1450 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms