RNA–Protein interactions for RNA: ENST00000399362.8

CLASP2-204, Transcript of cytoplasmic linker associated protein 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLASP2, Length 7,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP2-204ENST00000399362 PKD2L1Q9P0L9 805 aa16.95■□□□□ 0.3
CLASP2-204ENST00000399362 USP16Q9Y5T5 823 aa16.95■□□□□ 0.3
CLASP2-204ENST00000399362 TAF12Q16514 161 aa16.94■□□□□ 0.3
CLASP2-204ENST00000399362 PAIP2Q9BPZ3 127 aaKnown RBP16.94■□□□□ 0.3
CLASP2-204ENST00000399362 CYP7A1P22680 504 aa16.94■□□□□ 0.3
CLASP2-204ENST00000399362 SPECC1Q5M775 1068 aa16.94■□□□□ 0.3
CLASP2-204ENST00000399362 FSIP1Q8NA03 581 aa16.94■□□□□ 0.3
CLASP2-204ENST00000399362 SBNO2Q9Y2G9 1366 aa16.94■□□□□ 0.3
CLASP2-204ENST00000399362 PRKG1Q13976 671 aa16.94■□□□□ 0.3
CLASP2-204ENST00000399362 RNF41Q9H4P4 317 aaPredicted RBP16.94■□□□□ 0.3
CLASP2-204ENST00000399362 APBB1IPQ7Z5R6 666 aaPredicted RBP16.94■□□□□ 0.3
CLASP2-204ENST00000399362 HDAC9Q9UKV0 1011 aa16.94■□□□□ 0.3
CLASP2-204ENST00000399362 ATAD2Q6PL18 1390 aa16.93■□□□□ 0.3
CLASP2-204ENST00000399362 METAP2P50579 478 aaKnown RBP eCLIP16.93■□□□□ 0.3
CLASP2-204ENST00000399362 TCHPQ9BT92 498 aa16.93■□□□□ 0.3
CLASP2-204ENST00000399362 ARID5AQ03989 594 aa16.93■□□□□ 0.3
CLASP2-204ENST00000399362 CETN1Q12798 172 aa16.93■□□□□ 0.3
CLASP2-204ENST00000399362 CCDC152Q4G0S7 254 aa16.93■□□□□ 0.3
CLASP2-204ENST00000399362 IFIT1BQ5T764 474 aaKnown RBP16.93■□□□□ 0.3
CLASP2-204ENST00000399362 NIP7Q9Y221 180 aaKnown RBP eCLIP16.93■□□□□ 0.3
CLASP2-204ENST00000399362 EP400NLQ6ZTU2 488 aa16.93■□□□□ 0.3
CLASP2-204ENST00000399362 POLR3GO15318 223 aaPredicted RBP16.92■□□□□ 0.3
CLASP2-204ENST00000399362 RNF187Q5TA31 235 aaPredicted RBP16.92■□□□□ 0.3
CLASP2-204ENST00000399362 MRVI1Q9Y6F6 885 aa16.92■□□□□ 0.3
CLASP2-204ENST00000399362 CCDC66A2RUB6 948 aa16.92■□□□□ 0.3
CLASP2-204ENST00000399362 KIF5BP33176 963 aa16.92■□□□□ 0.3
CLASP2-204ENST00000399362 SSH1Q8WYL5 1049 aa16.92■□□□□ 0.3
CLASP2-204ENST00000399362 CRNKL1Q9BZJ0 848 aaKnown RBP16.92■□□□□ 0.3
CLASP2-204ENST00000399362 ZSWIM4Q9H7M6 989 aa16.92■□□□□ 0.3
CLASP2-204ENST00000399362 SLC4A4Q9Y6R1 1079 aa16.92■□□□□ 0.3
CLASP2-204ENST00000399362 IL27Q8NEV9 243 aa16.91■□□□□ 0.3
CLASP2-204ENST00000399362 ERICH3Q5RHP9 1530 aa16.91■□□□□ 0.3
CLASP2-204ENST00000399362 PI4KAP2A4QPH2 592 aa16.91■□□□□ 0.3
CLASP2-204ENST00000399362 UBA7P41226 1012 aa16.91■□□□□ 0.3
CLASP2-204ENST00000399362 PI4KAP1Q8N8J0 262 aa16.91■□□□□ 0.3
CLASP2-204ENST00000399362 PARP3Q9Y6F1 533 aa16.91■□□□□ 0.3
CLASP2-204ENST00000399362 TBCAO75347 108 aaKnown RBP16.91■□□□□ 0.3
CLASP2-204ENST00000399362 POLD1P28340 1107 aa16.91■□□□□ 0.3
CLASP2-204ENST00000399362 GJB2P29033 226 aa16.91■□□□□ 0.3
CLASP2-204ENST00000399362 UBXN4Q92575 508 aa16.91■□□□□ 0.3
CLASP2-204ENST00000399362 SIRT1Q96EB6 747 aa16.9■□□□□ 0.3
CLASP2-204ENST00000399362 ARHGEF11O15085 1522 aa16.9■□□□□ 0.3
CLASP2-204ENST00000399362 CDK13Q14004 1512 aaKnown RBP16.9■□□□□ 0.3
CLASP2-204ENST00000399362 KIAA1107Q9UPP5 1409 aa16.9■□□□□ 0.3
CLASP2-204ENST00000399362 SFPQP23246 707 aaKnown RBP eCLIP16.9■□□□□ 0.3
CLASP2-204ENST00000399362 HELBQ8NG08 1087 aaPredicted RBP16.9■□□□□ 0.3
CLASP2-204ENST00000399362 TMC6Q7Z403 805 aa16.9■□□□□ 0.3
CLASP2-204ENST00000399362 DBF4Q9UBU7 674 aaPredicted RBP16.9■□□□□ 0.3
CLASP2-204ENST00000399362 CLIP2Q9UDT6 1046 aa16.9■□□□□ 0.3
CLASP2-204ENST00000399362 CHST3Q7LGC8 479 aa16.9■□□□□ 0.3
CLASP2-204ENST00000399362 IFNL2Q8IZJ0 200 aa16.9■□□□□ 0.3
CLASP2-204ENST00000399362 PPP1R14CQ8TAE6 165 aa16.9■□□□□ 0.3
CLASP2-204ENST00000399362 UIMC1Q96RL1 719 aa16.9■□□□□ 0.3
CLASP2-204ENST00000399362 SAP30BPQ9UHR5 308 aaKnown RBP16.9■□□□□ 0.3
CLASP2-204ENST00000399362 STX6O43752 255 aa16.9■□□□□ 0.3
CLASP2-204ENST00000399362 IARSP41252 1262 aaKnown RBP16.9■□□□□ 0.3
CLASP2-204ENST00000399362 EXOC1Q9NV70 894 aa16.9■□□□□ 0.3
CLASP2-204ENST00000399362 RPAP2Q8IXW5 612 aaPredicted RBP16.89■□□□□ 0.29
CLASP2-204ENST00000399362 TSNARE1Q96NA8 513 aa16.89■□□□□ 0.29
CLASP2-204ENST00000399362 ANO10Q9NW15 660 aa16.89■□□□□ 0.29
CLASP2-204ENST00000399362 RNF216Q9NWF9 866 aaPredicted RBP16.89■□□□□ 0.29
CLASP2-204ENST00000399362 USO1O60763 962 aaKnown RBP16.89■□□□□ 0.29
CLASP2-204ENST00000399362 PTPN14Q15678 1187 aa16.89■□□□□ 0.29
CLASP2-204ENST00000399362 DDX23Q9BUQ8 820 aaKnown RBP16.89■□□□□ 0.29
CLASP2-204ENST00000399362 LDHCP07864 332 aa16.89■□□□□ 0.29
CLASP2-204ENST00000399362 LMOD1P29536 600 aaPredicted RBP16.89■□□□□ 0.29
CLASP2-204ENST00000399362 JADE2Q9NQC1 790 aa16.89■□□□□ 0.29
CLASP2-204ENST00000399362 PHAXQ9H814 394 aaKnown RBP16.88■□□□□ 0.29
CLASP2-204ENST00000399362 C20orf194Q5TEA3 1177 aa16.88■□□□□ 0.29
CLASP2-204ENST00000399362 MIGA1Q8NAN2 632 aa16.88■□□□□ 0.29
CLASP2-204ENST00000399362 PRDM10Q9NQV6 1147 aa16.88■□□□□ 0.29
CLASP2-204ENST00000399362 HECW1Q76N89 1606 aa16.88■□□□□ 0.29
CLASP2-204ENST00000399362 TTF1Q15361 905 aaPredicted RBP16.88■□□□□ 0.29
CLASP2-204ENST00000399362 PLIN2Q99541 437 aa16.88■□□□□ 0.29
CLASP2-204ENST00000399362 CHPF2Q9P2E5 772 aa16.88■□□□□ 0.29
CLASP2-204ENST00000399362 HMGB2P26583 209 aaKnown RBP16.88■□□□□ 0.29
CLASP2-204ENST00000399362 AMPD3Q01432 767 aa16.88■□□□□ 0.29
CLASP2-204ENST00000399362 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.88■□□□□ 0.29
CLASP2-204ENST00000399362 GCOM1H8Y6P7 765 aaPredicted RBP16.88■□□□□ 0.29
CLASP2-204ENST00000399362 MYZAPP0CAP1 466 aa16.88■□□□□ 0.29
CLASP2-204ENST00000399362 RFX1P22670 979 aa16.88■□□□□ 0.29
CLASP2-204ENST00000399362 NECAB1Q8N987 351 aa16.88■□□□□ 0.29
CLASP2-204ENST00000399362 CCDC12Q8WUD4 166 aaPredicted RBP16.88■□□□□ 0.29
CLASP2-204ENST00000399362 HARSP12081 509 aaKnown RBP16.87■□□□□ 0.29
CLASP2-204ENST00000399362 PTGS1P23219 599 aa16.87■□□□□ 0.29
CLASP2-204ENST00000399362 TCEANC2Q96MN5 208 aa16.87■□□□□ 0.29
CLASP2-204ENST00000399362 FAM107BQ9H098 131 aa16.87■□□□□ 0.29
CLASP2-204ENST00000399362 NSFL1CQ9UNZ2 370 aaKnown RBP16.87■□□□□ 0.29
CLASP2-204ENST00000399362 CD109Q6YHK3 1445 aa16.87■□□□□ 0.29
CLASP2-204ENST00000399362 FERP16591 822 aa16.87■□□□□ 0.29
CLASP2-204ENST00000399362 ZYXQ15942 572 aaKnown RBP16.87■□□□□ 0.29
CLASP2-204ENST00000399362 ZCRB1Q8TBF4 217 aaKnown RBP16.87■□□□□ 0.29
CLASP2-204ENST00000399362 CASKIN1Q8WXD9 1431 aa16.87■□□□□ 0.29
CLASP2-204ENST00000399362 LRPPRCP42704 1394 aaKnown RBP16.87■□□□□ 0.29
CLASP2-204ENST00000399362 FLIIQ13045 1269 aa16.87■□□□□ 0.29
CLASP2-204ENST00000399362 RAB3GAP1Q15042 981 aa16.87■□□□□ 0.29
CLASP2-204ENST00000399362 PAFAH1B1P43034 410 aa16.87■□□□□ 0.29
CLASP2-204ENST00000399362 MAATS1Q7Z4T9 603 aa16.87■□□□□ 0.29
CLASP2-204ENST00000399362 TRERF1Q96PN7 1200 aa16.87■□□□□ 0.29
CLASP2-204ENST00000399362 YEATS4O95619 227 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms