RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 JDP2Q8WYK2 163 aa23.55■■□□□ 1.36
RPUSD3-201ENST00000383820 GPTP24298 496 aa23.54■■□□□ 1.36
RPUSD3-201ENST00000383820 PARP10Q53GL7 1025 aa23.54■■□□□ 1.36
RPUSD3-201ENST00000383820 PNMA8AQ86V59 439 aaPredicted RBP23.54■■□□□ 1.36
RPUSD3-201ENST00000383820 GPC2Q8N158 579 aa23.54■■□□□ 1.36
RPUSD3-201ENST00000383820 CRAMP1Q96RY5 1269 aa23.54■■□□□ 1.36
RPUSD3-201ENST00000383820 TSPYL4Q9UJ04 414 aa23.54■■□□□ 1.36
RPUSD3-201ENST00000383820 ADAMTSL1Q8N6G6 1762 aa23.53■■□□□ 1.36
RPUSD3-201ENST00000383820 NTSR2O95665 410 aa23.53■■□□□ 1.36
RPUSD3-201ENST00000383820 EPHX2P34913 555 aa23.53■■□□□ 1.36
RPUSD3-201ENST00000383820 RALBP1Q15311 655 aa23.53■■□□□ 1.36
RPUSD3-201ENST00000383820 PPP1R42Q7Z4L9 355 aa23.53■■□□□ 1.36
RPUSD3-201ENST00000383820 TNS4Q8IZW8 715 aa23.53■■□□□ 1.36
RPUSD3-201ENST00000383820 RBM17Q96I25 401 aaKnown RBP23.53■■□□□ 1.36
RPUSD3-201ENST00000383820 ITGBL1O95965 494 aaPredicted RBP23.52■■□□□ 1.36
RPUSD3-201ENST00000383820 EAPPQ56P03 285 aaPredicted RBP23.52■■□□□ 1.36
RPUSD3-201ENST00000383820 MKRN1Q9UHC7 482 aaKnown RBP23.52■■□□□ 1.36
RPUSD3-201ENST00000383820 RIPK4P57078 832 aa23.51■■□□□ 1.35
RPUSD3-201ENST00000383820 LMOD3Q0VAK6 560 aa23.51■■□□□ 1.35
RPUSD3-201ENST00000383820 LRP10Q7Z4F1 713 aa23.51■■□□□ 1.35
RPUSD3-201ENST00000383820 CNTNAP1P78357 1384 aa23.51■■□□□ 1.35
RPUSD3-201ENST00000383820 PDIA6Q15084 440 aa23.5■■□□□ 1.35
RPUSD3-201ENST00000383820 RNF123Q5XPI4 1314 aa23.5■■□□□ 1.35
RPUSD3-201ENST00000383820 PCNTO95613 3336 aa23.49■■□□□ 1.35
RPUSD3-201ENST00000383820 TMEM88BA6NKF7 163 aa23.49■■□□□ 1.35
RPUSD3-201ENST00000383820 EIF6P56537 245 aaKnown RBP23.49■■□□□ 1.35
RPUSD3-201ENST00000383820 NLRP3Q96P20 1036 aa23.49■■□□□ 1.35
RPUSD3-201ENST00000383820 CLEC11AQ9Y240 323 aa23.49■■□□□ 1.35
RPUSD3-201ENST00000383820 PPEF1O14829 653 aaPredicted RBP23.48■■□□□ 1.35
RPUSD3-201ENST00000383820 SLC10A5Q5PT55 438 aa23.48■■□□□ 1.35
RPUSD3-201ENST00000383820 EIF2S2P20042 333 aaKnown RBP23.47■■□□□ 1.35
RPUSD3-201ENST00000383820 TMPOP42166 694 aaKnown RBP23.47■■□□□ 1.35
RPUSD3-201ENST00000383820 UTP14AQ9BVJ6 771 aaKnown RBP23.47■■□□□ 1.35
RPUSD3-201ENST00000383820 COL4A5P29400 1685 aa23.47■■□□□ 1.35
RPUSD3-201ENST00000383820 HSP90AB3PQ58FF7 597 aa23.46■■□□□ 1.35
RPUSD3-201ENST00000383820 LARGE2Q8N3Y3 721 aa23.46■■□□□ 1.35
RPUSD3-201ENST00000383820 TMX4Q9H1E5 349 aaPredicted RBP23.46■■□□□ 1.35
RPUSD3-201ENST00000383820 VPS33BQ9H267 617 aa23.46■■□□□ 1.35
RPUSD3-201ENST00000383820 CNTROBQ8N137 903 aa23.45■■□□□ 1.34
RPUSD3-201ENST00000383820 LMOD1P29536 600 aaPredicted RBP23.44■■□□□ 1.34
RPUSD3-201ENST00000383820 C3orf67Q6ZVT6 689 aa23.44■■□□□ 1.34
RPUSD3-201ENST00000383820 GJA3Q9Y6H8 435 aa23.44■■□□□ 1.34
RPUSD3-201ENST00000383820 ANKRD36CQ5JPF3 1778 aa23.44■■□□□ 1.34
RPUSD3-201ENST00000383820 PROSER3Q2NL68 480 aa23.43■■□□□ 1.34
RPUSD3-201ENST00000383820 ATP6V0A2Q9Y487 856 aa23.43■■□□□ 1.34
RPUSD3-201ENST00000383820 MAP1SQ66K74 1059 aaPredicted RBP23.42■■□□□ 1.34
RPUSD3-201ENST00000383820 NIM1KQ8IY84 436 aa23.42■■□□□ 1.34
RPUSD3-201ENST00000383820 ANXA1P04083 346 aa23.41■■□□□ 1.34
RPUSD3-201ENST00000383820 VEGFBP49765 207 aa23.41■■□□□ 1.34
RPUSD3-201ENST00000383820 COPS6Q7L5N1 327 aa23.41■■□□□ 1.34
RPUSD3-201ENST00000383820 SUPT20HQ8NEM7 779 aa23.41■■□□□ 1.34
RPUSD3-201ENST00000383820 DDX21Q9NR30 783 aaKnown RBP eCLIP23.41■■□□□ 1.34
RPUSD3-201ENST00000383820 LTBP1Q14766 1721 aa23.41■■□□□ 1.34
RPUSD3-201ENST00000383820 ABCC4O15439 1325 aa23.4■■□□□ 1.34
RPUSD3-201ENST00000383820 MYBBP1AQ9BQG0 1328 aaKnown RBP23.4■■□□□ 1.34
RPUSD3-201ENST00000383820 RASSF10A6NK89 507 aa23.4■■□□□ 1.34
RPUSD3-201ENST00000383820 CHL1O00533 1208 aa23.4■■□□□ 1.34
RPUSD3-201ENST00000383820 TCERG1O14776 1098 aaKnown RBP23.4■■□□□ 1.34
RPUSD3-201ENST00000383820 PPIP5K2O43314 1243 aa23.4■■□□□ 1.34
RPUSD3-201ENST00000383820 BBOX1O75936 387 aa23.4■■□□□ 1.34
RPUSD3-201ENST00000383820 SCNN1DP51172 638 aa23.4■■□□□ 1.34
RPUSD3-201ENST00000383820 NLRP10Q86W26 655 aa23.4■■□□□ 1.34
RPUSD3-201ENST00000383820 RTFDC1Q9BY42 306 aaPredicted RBP23.4■■□□□ 1.34
RPUSD3-201ENST00000383820 TCIRG1Q13488 830 aa23.39■■□□□ 1.33
RPUSD3-201ENST00000383820 USP50Q70EL3 339 aaPredicted RBP23.39■■□□□ 1.33
RPUSD3-201ENST00000383820 XAGE3Q8WTP9 111 aa23.39■■□□□ 1.33
RPUSD3-201ENST00000383820 LAMB2P55268 1798 aa23.38■■□□□ 1.33
RPUSD3-201ENST00000383820 FOXN1O15353 648 aa23.38■■□□□ 1.33
RPUSD3-201ENST00000383820 CAPN15O75808 1086 aa23.38■■□□□ 1.33
RPUSD3-201ENST00000383820 DEFB115Q30KQ5 88 aa23.38■■□□□ 1.33
RPUSD3-201ENST00000383820 SLC51AQ86UW1 340 aa23.38■■□□□ 1.33
RPUSD3-201ENST00000383820 SP8Q8IXZ3 490 aa23.38■■□□□ 1.33
RPUSD3-201ENST00000383820 PRDM10Q9NQV6 1147 aa23.38■■□□□ 1.33
RPUSD3-201ENST00000383820 EPS15P42566 896 aa23.37■■□□□ 1.33
RPUSD3-201ENST00000383820 AIMP1Q12904 312 aaKnown RBP23.37■■□□□ 1.33
RPUSD3-201ENST00000383820 AOC3Q16853 763 aa23.37■■□□□ 1.33
RPUSD3-201ENST00000383820 AIDAQ96BJ3 306 aa23.37■■□□□ 1.33
RPUSD3-201ENST00000383820 RUNDC1Q96C34 613 aa23.37■■□□□ 1.33
RPUSD3-201ENST00000383820 SH3TC1Q8TE82 1336 aa23.36■■□□□ 1.33
RPUSD3-201ENST00000383820 HOXB7P09629 217 aa23.36■■□□□ 1.33
RPUSD3-201ENST00000383820 NECTIN2Q92692 538 aa23.36■■□□□ 1.33
RPUSD3-201ENST00000383820 TRMT112Q9UI30 125 aaKnown RBP23.36■■□□□ 1.33
RPUSD3-201ENST00000383820 ZNRF3Q9ULT6 936 aa23.36■■□□□ 1.33
RPUSD3-201ENST00000383820 CTCFP49711 727 aaPredicted RBP23.35■■□□□ 1.33
RPUSD3-201ENST00000383820 NEUROD2Q15784 382 aa23.35■■□□□ 1.33
RPUSD3-201ENST00000383820 DPP8Q6V1X1 898 aaPredicted RBP23.35■■□□□ 1.33
RPUSD3-201ENST00000383820 DDX46Q7L014 1031 aaKnown RBP23.35■■□□□ 1.33
RPUSD3-201ENST00000383820 WBP1LQ9NX94 342 aa23.35■■□□□ 1.33
RPUSD3-201ENST00000383820 TRIM35Q9UPQ4 493 aa23.35■■□□□ 1.33
RPUSD3-201ENST00000383820 HCLS1P14317 486 aaPredicted RBP23.34■■□□□ 1.33
RPUSD3-201ENST00000383820 GRAPQ13588 217 aa23.34■■□□□ 1.33
RPUSD3-201ENST00000383820 TMC4Q7Z404 712 aa23.34■■□□□ 1.33
RPUSD3-201ENST00000383820 CCDC146Q8IYE0 955 aa23.34■■□□□ 1.33
RPUSD3-201ENST00000383820 MPNDQ8N594 471 aa23.34■■□□□ 1.33
RPUSD3-201ENST00000383820 GRAPLQ8TC17 118 aaPredicted RBP23.34■■□□□ 1.33
RPUSD3-201ENST00000383820 ADARB2Q9NS39 739 aaKnown RBP23.34■■□□□ 1.33
RPUSD3-201ENST00000383820 GPRC5DQ9NZD1 345 aa23.34■■□□□ 1.33
RPUSD3-201ENST00000383820 CXCL9Q07325 125 aa23.33■■□□□ 1.33
RPUSD3-201ENST00000383820 WDR43Q15061 677 aaKnown RBP eCLIP23.33■■□□□ 1.33
RPUSD3-201ENST00000383820 ABT1Q9ULW3 272 aaKnown RBP23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms