RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 HOXA10P31260 410 aaPredicted RBP34.59■■■■□ 3.13
NPHP3-202ENST00000383282 PDIA6Q15084 440 aa34.59■■■■□ 3.13
NPHP3-202ENST00000383282 GRIPAP1Q4V328 841 aa34.59■■■■□ 3.13
NPHP3-202ENST00000383282 LDHDQ86WU2 507 aa34.59■■■■□ 3.13
NPHP3-202ENST00000383282 TAF1DQ9H5J8 278 aaPredicted RBP34.59■■■■□ 3.13
NPHP3-202ENST00000383282 WDR43Q15061 677 aaKnown RBP eCLIP34.58■■■■□ 3.13
NPHP3-202ENST00000383282 NEUROD2Q15784 382 aa34.58■■■■□ 3.13
NPHP3-202ENST00000383282 CCDC146Q8IYE0 955 aa34.58■■■■□ 3.13
NPHP3-202ENST00000383282 JDP2Q8WYK2 163 aa34.58■■■■□ 3.13
NPHP3-202ENST00000383282 LRP10Q7Z4F1 713 aa34.57■■■■□ 3.12
NPHP3-202ENST00000383282 CRAMP1Q96RY5 1269 aa34.57■■■■□ 3.12
NPHP3-202ENST00000383282 FZD9O00144 591 aa34.56■■■■□ 3.12
NPHP3-202ENST00000383282 NLRP3Q96P20 1036 aa34.56■■■■□ 3.12
NPHP3-202ENST00000383282 HACL1Q9UJ83 578 aa34.56■■■■□ 3.12
NPHP3-202ENST00000383282 UTP14AQ9BVJ6 771 aaKnown RBP34.55■■■■□ 3.12
NPHP3-202ENST00000383282 CREBZFQ9NS37 354 aa34.55■■■■□ 3.12
NPHP3-202ENST00000383282 SCN4AP35499 1836 aa34.54■■■■□ 3.12
NPHP3-202ENST00000383282 ANXA1P04083 346 aa34.54■■■■□ 3.12
NPHP3-202ENST00000383282 PROSER3Q2NL68 480 aa34.54■■■■□ 3.12
NPHP3-202ENST00000383282 HSP90AB3PQ58FF7 597 aa34.54■■■■□ 3.12
NPHP3-202ENST00000383282 RUNDC1Q96C34 613 aa34.54■■■■□ 3.12
NPHP3-202ENST00000383282 SNED1Q8TER0 1413 aa34.54■■■■□ 3.12
NPHP3-202ENST00000383282 PPEF1O14829 653 aaPredicted RBP34.53■■■■□ 3.12
NPHP3-202ENST00000383282 EAPPQ56P03 285 aaPredicted RBP34.53■■■■□ 3.12
NPHP3-202ENST00000383282 NECTIN2Q92692 538 aa34.53■■■■□ 3.12
NPHP3-202ENST00000383282 TMX4Q9H1E5 349 aaPredicted RBP34.53■■■■□ 3.12
NPHP3-202ENST00000383282 GPC2Q8N158 579 aa34.52■■■■□ 3.12
NPHP3-202ENST00000383282 EIF6P56537 245 aaKnown RBP34.51■■■■□ 3.12
NPHP3-202ENST00000383282 AIMP1Q12904 312 aaKnown RBP34.51■■■■□ 3.12
NPHP3-202ENST00000383282 COPS6Q7L5N1 327 aa34.51■■■■□ 3.12
NPHP3-202ENST00000383282 LAS1LQ9Y4W2 734 aaKnown RBP34.51■■■■□ 3.12
NPHP3-202ENST00000383282 RNF123Q5XPI4 1314 aa34.51■■■■□ 3.11
NPHP3-202ENST00000383282 CHL1O00533 1208 aa34.5■■■■□ 3.11
NPHP3-202ENST00000383282 EPHX2P34913 555 aa34.5■■■■□ 3.11
NPHP3-202ENST00000383282 PNMA8AQ86V59 439 aaPredicted RBP34.49■■■■□ 3.11
NPHP3-202ENST00000383282 XAGE3Q8WTP9 111 aa34.49■■■■□ 3.11
NPHP3-202ENST00000383282 CLEC11AQ9Y240 323 aa34.49■■■■□ 3.11
NPHP3-202ENST00000383282 TCERG1O14776 1098 aaKnown RBP34.48■■■■□ 3.11
NPHP3-202ENST00000383282 SLC10A5Q5PT55 438 aa34.48■■■■□ 3.11
NPHP3-202ENST00000383282 C3orf67Q6ZVT6 689 aa34.48■■■■□ 3.11
NPHP3-202ENST00000383282 LARGE2Q8N3Y3 721 aa34.48■■■■□ 3.11
NPHP3-202ENST00000383282 DDX21Q9NR30 783 aaKnown RBP eCLIP34.48■■■■□ 3.11
NPHP3-202ENST00000383282 TRIM35Q9UPQ4 493 aa34.46■■■■□ 3.11
NPHP3-202ENST00000383282 PASKQ96RG2 1323 aa34.46■■■■□ 3.11
NPHP3-202ENST00000383282 HSPA1AP0DMV8 641 aaKnown RBP34.45■■■■□ 3.11
NPHP3-202ENST00000383282 HSPA1BP0DMV9 641 aaKnown RBP34.45■■■■□ 3.11
NPHP3-202ENST00000383282 GJA3Q9Y6H8 435 aa34.45■■■■□ 3.11
NPHP3-202ENST00000383282 PCNTO95613 3336 aa34.45■■■■□ 3.11
NPHP3-202ENST00000383282 TCIRG1Q13488 830 aa34.44■■■■□ 3.1
NPHP3-202ENST00000383282 COL13A1Q5TAT6 717 aaPredicted RBP34.44■■■■□ 3.1
NPHP3-202ENST00000383282 NLRP10Q86W26 655 aa34.44■■■■□ 3.1
NPHP3-202ENST00000383282 MKRN1Q9UHC7 482 aaKnown RBP34.44■■■■□ 3.1
NPHP3-202ENST00000383282 ADAMTS8Q9UP79 889 aa34.44■■■■□ 3.1
NPHP3-202ENST00000383282 LMOD1P29536 600 aaPredicted RBP34.43■■■■□ 3.1
NPHP3-202ENST00000383282 ZEB1P37275 1124 aaPredicted RBP34.43■■■■□ 3.1
NPHP3-202ENST00000383282 KRT24Q2M2I5 525 aa34.43■■■■□ 3.1
NPHP3-202ENST00000383282 ATP6V0A2Q9Y487 856 aa34.43■■■■□ 3.1
NPHP3-202ENST00000383282 HOXB7P09629 217 aa34.42■■■■□ 3.1
NPHP3-202ENST00000383282 HDGFL1Q5TGJ6 251 aa34.42■■■■□ 3.1
NPHP3-202ENST00000383282 NIM1KQ8IY84 436 aa34.42■■■■□ 3.1
NPHP3-202ENST00000383282 TRMT112Q9UI30 125 aaKnown RBP34.42■■■■□ 3.1
NPHP3-202ENST00000383282 ABCC4O15439 1325 aa34.41■■■■□ 3.1
NPHP3-202ENST00000383282 CHPF2Q9P2E5 772 aa34.41■■■■□ 3.1
NPHP3-202ENST00000383282 PPIP5K2O43314 1243 aa34.4■■■■□ 3.1
NPHP3-202ENST00000383282 VPS33BQ9H267 617 aa34.4■■■■□ 3.1
NPHP3-202ENST00000383282 SH3TC1Q8TE82 1336 aa34.39■■■■□ 3.1
NPHP3-202ENST00000383282 TMEM88BA6NKF7 163 aa34.39■■■■□ 3.1
NPHP3-202ENST00000383282 ITGBL1O95965 494 aaPredicted RBP34.39■■■■□ 3.1
NPHP3-202ENST00000383282 SUPT20HQ8NEM7 779 aa34.39■■■■□ 3.1
NPHP3-202ENST00000383282 BBOX1O75936 387 aa34.38■■■■□ 3.09
NPHP3-202ENST00000383282 HCLS1P14317 486 aaPredicted RBP34.38■■■■□ 3.09
NPHP3-202ENST00000383282 COL4A5P29400 1685 aa34.38■■■■□ 3.09
NPHP3-202ENST00000383282 CNTNAP1P78357 1384 aa34.37■■■■□ 3.09
NPHP3-202ENST00000383282 DDX46Q7L014 1031 aaKnown RBP34.37■■■■□ 3.09
NPHP3-202ENST00000383282 SLC51AQ86UW1 340 aa34.37■■■■□ 3.09
NPHP3-202ENST00000383282 CNTROBQ8N137 903 aa34.37■■■■□ 3.09
NPHP3-202ENST00000383282 CFAP44Q96MT7 982 aa34.37■■■■□ 3.09
NPHP3-202ENST00000383282 DBF4Q9UBU7 674 aaPredicted RBP34.37■■■■□ 3.09
NPHP3-202ENST00000383282 AOC3Q16853 763 aa34.36■■■■□ 3.09
NPHP3-202ENST00000383282 MAP1SQ66K74 1059 aaPredicted RBP34.36■■■■□ 3.09
NPHP3-202ENST00000383282 PLBD2Q8NHP8 589 aa34.36■■■■□ 3.09
NPHP3-202ENST00000383282 PRKRIP1Q9H875 184 aaPredicted RBP34.36■■■■□ 3.09
NPHP3-202ENST00000383282 ANKRD36CQ5JPF3 1778 aa34.36■■■■□ 3.09
NPHP3-202ENST00000383282 ADAMTSL1Q8N6G6 1762 aa34.34■■■■□ 3.09
NPHP3-202ENST00000383282 DPP8Q6V1X1 898 aaPredicted RBP34.34■■■■□ 3.09
NPHP3-202ENST00000383282 ANKRD13DQ6ZTN6 518 aa34.34■■■■□ 3.09
NPHP3-202ENST00000383282 SP8Q8IXZ3 490 aa34.34■■■■□ 3.09
NPHP3-202ENST00000383282 SCNN1DP51172 638 aa34.33■■■■□ 3.09
NPHP3-202ENST00000383282 TNS4Q8IZW8 715 aa34.33■■■■□ 3.09
NPHP3-202ENST00000383282 RTFDC1Q9BY42 306 aaPredicted RBP34.33■■■■□ 3.09
NPHP3-202ENST00000383282 GRAPQ13588 217 aa34.32■■■■□ 3.08
NPHP3-202ENST00000383282 DUSP27Q5VZP5 1158 aa34.32■■■■□ 3.08
NPHP3-202ENST00000383282 MPNDQ8N594 471 aa34.32■■■■□ 3.08
NPHP3-202ENST00000383282 GRAPLQ8TC17 118 aaPredicted RBP34.32■■■■□ 3.08
NPHP3-202ENST00000383282 HYPKQ9NX55 129 aa34.31■■■■□ 3.08
NPHP3-202ENST00000383282 EPS15P42566 896 aa34.3■■■■□ 3.08
NPHP3-202ENST00000383282 USP50Q70EL3 339 aaPredicted RBP34.29■■■■□ 3.08
NPHP3-202ENST00000383282 TMC4Q7Z404 712 aa34.29■■■■□ 3.08
NPHP3-202ENST00000383282 MBIPQ9NS73 344 aa34.29■■■■□ 3.08
NPHP3-202ENST00000383282 ZNRF3Q9ULT6 936 aa34.29■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms