RNA–Protein interactions for RNA: ENST00000379995.1

C9orf72-201, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 3

Gene C9orf72, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-201ENST00000379995 ANXA1P04083 346 aa12.45□□□□□ -0.42
C9orf72-201ENST00000379995 MYCNP04198 464 aaPredicted RBP12.45□□□□□ -0.42
C9orf72-201ENST00000379995 HOXA10P31260 410 aaPredicted RBP12.45□□□□□ -0.42
C9orf72-201ENST00000379995 LMOD3Q0VAK6 560 aa12.45□□□□□ -0.42
C9orf72-201ENST00000379995 PROSER3Q2NL68 480 aa12.45□□□□□ -0.42
C9orf72-201ENST00000379995 CC2D2BQ6DHV5 1058 aa12.45□□□□□ -0.42
C9orf72-201ENST00000379995 CCDC146Q8IYE0 955 aa12.45□□□□□ -0.42
C9orf72-201ENST00000379995 RPGRQ92834 1020 aaKnown RBP12.45□□□□□ -0.42
C9orf72-201ENST00000379995 PSMD1Q99460 953 aa12.45□□□□□ -0.42
C9orf72-201ENST00000379995 SLX4Q8IY92 1834 aa12.44□□□□□ -0.42
C9orf72-201ENST00000379995 FZD9O00144 591 aa12.44□□□□□ -0.42
C9orf72-201ENST00000379995 NEUROD2Q15784 382 aa12.44□□□□□ -0.42
C9orf72-201ENST00000379995 PARP10Q53GL7 1025 aa12.44□□□□□ -0.42
C9orf72-201ENST00000379995 C3orf67Q6ZVT6 689 aa12.44□□□□□ -0.42
C9orf72-201ENST00000379995 PPP1R42Q7Z4L9 355 aa12.44□□□□□ -0.42
C9orf72-201ENST00000379995 LDHDQ86WU2 507 aa12.44□□□□□ -0.42
C9orf72-201ENST00000379995 RBM17Q96I25 401 aaKnown RBP12.44□□□□□ -0.42
C9orf72-201ENST00000379995 WDR90Q96KV7 1748 aa12.44□□□□□ -0.42
C9orf72-201ENST00000379995 MYBBP1AQ9BQG0 1328 aaKnown RBP12.43□□□□□ -0.42
C9orf72-201ENST00000379995 TCERG1O14776 1098 aaKnown RBP12.43□□□□□ -0.42
C9orf72-201ENST00000379995 DSG3P32926 999 aa12.43□□□□□ -0.42
C9orf72-201ENST00000379995 EAPPQ56P03 285 aaPredicted RBP12.43□□□□□ -0.42
C9orf72-201ENST00000379995 COL13A1Q5TAT6 717 aaPredicted RBP12.43□□□□□ -0.42
C9orf72-201ENST00000379995 SLC51AQ86UW1 340 aa12.43□□□□□ -0.42
C9orf72-201ENST00000379995 JDP2Q8WYK2 163 aa12.43□□□□□ -0.42
C9orf72-201ENST00000379995 NECTIN2Q92692 538 aa12.43□□□□□ -0.42
C9orf72-201ENST00000379995 CRAMP1Q96RY5 1269 aa12.43□□□□□ -0.42
C9orf72-201ENST00000379995 UTP14AQ9BVJ6 771 aaKnown RBP12.43□□□□□ -0.42
C9orf72-201ENST00000379995 CREBZFQ9NS37 354 aa12.43□□□□□ -0.42
C9orf72-201ENST00000379995 HACL1Q9UJ83 578 aa12.43□□□□□ -0.42
C9orf72-201ENST00000379995 TIAM2Q8IVF5 1701 aa12.42□□□□□ -0.42
C9orf72-201ENST00000379995 PPEF1O14829 653 aaPredicted RBP12.42□□□□□ -0.42
C9orf72-201ENST00000379995 EPHX2P34913 555 aa12.42□□□□□ -0.42
C9orf72-201ENST00000379995 AIMP1Q12904 312 aaKnown RBP12.42□□□□□ -0.42
C9orf72-201ENST00000379995 SLC10A5Q5PT55 438 aa12.42□□□□□ -0.42
C9orf72-201ENST00000379995 COPS6Q7L5N1 327 aa12.42□□□□□ -0.42
C9orf72-201ENST00000379995 XAGE3Q8WTP9 111 aa12.42□□□□□ -0.42
C9orf72-201ENST00000379995 NLRP3Q96P20 1036 aa12.42□□□□□ -0.42
C9orf72-201ENST00000379995 RIC1Q4ADV7 1423 aa12.42□□□□□ -0.42
C9orf72-201ENST00000379995 SNED1Q8TER0 1413 aa12.42□□□□□ -0.42
C9orf72-201ENST00000379995 RNF123Q5XPI4 1314 aa12.41□□□□□ -0.42
C9orf72-201ENST00000379995 PASKQ96RG2 1323 aa12.41□□□□□ -0.42
C9orf72-201ENST00000379995 CHL1O00533 1208 aa12.41□□□□□ -0.42
C9orf72-201ENST00000379995 HSPA1AP0DMV8 641 aaKnown RBP12.41□□□□□ -0.42
C9orf72-201ENST00000379995 HSPA1BP0DMV9 641 aaKnown RBP12.41□□□□□ -0.42
C9orf72-201ENST00000379995 KRT24Q2M2I5 525 aa12.41□□□□□ -0.42
C9orf72-201ENST00000379995 FER1L6Q2WGJ9 1857 aa12.41□□□□□ -0.42
C9orf72-201ENST00000379995 GRIPAP1Q4V328 841 aa12.41□□□□□ -0.42
C9orf72-201ENST00000379995 HSP90AB3PQ58FF7 597 aa12.41□□□□□ -0.42
C9orf72-201ENST00000379995 GPC2Q8N158 579 aa12.41□□□□□ -0.42
C9orf72-201ENST00000379995 RUNDC1Q96C34 613 aa12.41□□□□□ -0.42
C9orf72-201ENST00000379995 MKRN1Q9UHC7 482 aaKnown RBP12.41□□□□□ -0.42
C9orf72-201ENST00000379995 TRIM35Q9UPQ4 493 aa12.41□□□□□ -0.42
C9orf72-201ENST00000379995 CLEC11AQ9Y240 323 aa12.41□□□□□ -0.42
C9orf72-201ENST00000379995 LAS1LQ9Y4W2 734 aaKnown RBP12.41□□□□□ -0.42
C9orf72-201ENST00000379995 PCNTO95613 3336 aa12.4□□□□□ -0.42
C9orf72-201ENST00000379995 ITGBL1O95965 494 aaPredicted RBP12.4□□□□□ -0.42
C9orf72-201ENST00000379995 EIF6P56537 245 aaKnown RBP12.4□□□□□ -0.42
C9orf72-201ENST00000379995 WDR43Q15061 677 aaKnown RBP eCLIP12.4□□□□□ -0.42
C9orf72-201ENST00000379995 PNMA8AQ86V59 439 aaPredicted RBP12.4□□□□□ -0.42
C9orf72-201ENST00000379995 NLRP10Q86W26 655 aa12.4□□□□□ -0.42
C9orf72-201ENST00000379995 LARGE2Q8N3Y3 721 aa12.4□□□□□ -0.42
C9orf72-201ENST00000379995 GJA3Q9Y6H8 435 aa12.4□□□□□ -0.42
C9orf72-201ENST00000379995 KDM3BQ7LBC6 1761 aa12.39□□□□□ -0.43
C9orf72-201ENST00000379995 HCLS1P14317 486 aaPredicted RBP12.39□□□□□ -0.43
C9orf72-201ENST00000379995 TCIRG1Q13488 830 aa12.39□□□□□ -0.43
C9orf72-201ENST00000379995 TMX4Q9H1E5 349 aaPredicted RBP12.39□□□□□ -0.43
C9orf72-201ENST00000379995 DDX21Q9NR30 783 aaKnown RBP eCLIP12.39□□□□□ -0.43
C9orf72-201ENST00000379995 ADAMTS8Q9UP79 889 aa12.39□□□□□ -0.43
C9orf72-201ENST00000379995 ATP6V0A2Q9Y487 856 aa12.39□□□□□ -0.43
C9orf72-201ENST00000379995 ABCC4O15439 1325 aa12.38□□□□□ -0.43
C9orf72-201ENST00000379995 MAP1SQ66K74 1059 aaPredicted RBP12.38□□□□□ -0.43
C9orf72-201ENST00000379995 CNTROBQ8N137 903 aa12.38□□□□□ -0.43
C9orf72-201ENST00000379995 CHPF2Q9P2E5 772 aa12.38□□□□□ -0.43
C9orf72-201ENST00000379995 TRMT112Q9UI30 125 aaKnown RBP12.38□□□□□ -0.43
C9orf72-201ENST00000379995 LAMB4A4D0S4 1761 aa12.38□□□□□ -0.43
C9orf72-201ENST00000379995 TMEM88BA6NKF7 163 aa12.37□□□□□ -0.43
C9orf72-201ENST00000379995 PPIP5K2O43314 1243 aa12.37□□□□□ -0.43
C9orf72-201ENST00000379995 BBOX1O75936 387 aa12.37□□□□□ -0.43
C9orf72-201ENST00000379995 LMOD1P29536 600 aaPredicted RBP12.37□□□□□ -0.43
C9orf72-201ENST00000379995 SCNN1DP51172 638 aa12.37□□□□□ -0.43
C9orf72-201ENST00000379995 HDGFL1Q5TGJ6 251 aa12.37□□□□□ -0.43
C9orf72-201ENST00000379995 NIM1KQ8IY84 436 aa12.37□□□□□ -0.43
C9orf72-201ENST00000379995 TNS4Q8IZW8 715 aa12.37□□□□□ -0.43
C9orf72-201ENST00000379995 ZNF428Q96B54 188 aa12.37□□□□□ -0.43
C9orf72-201ENST00000379995 FOXD4L1Q9NU39 408 aa12.37□□□□□ -0.43
C9orf72-201ENST00000379995 CNTNAP1P78357 1384 aa12.37□□□□□ -0.43
C9orf72-201ENST00000379995 SH3TC1Q8TE82 1336 aa12.37□□□□□ -0.43
C9orf72-201ENST00000379995 COL4A5P29400 1685 aa12.36□□□□□ -0.43
C9orf72-201ENST00000379995 EPS15P42566 896 aa12.36□□□□□ -0.43
C9orf72-201ENST00000379995 AOC3Q16853 763 aa12.36□□□□□ -0.43
C9orf72-201ENST00000379995 DDX46Q7L014 1031 aaKnown RBP12.36□□□□□ -0.43
C9orf72-201ENST00000379995 SP8Q8IXZ3 490 aa12.36□□□□□ -0.43
C9orf72-201ENST00000379995 ARFGEF2Q9Y6D5 1785 aa12.35□□□□□ -0.43
C9orf72-201ENST00000379995 HOXB7P09629 217 aa12.35□□□□□ -0.43
C9orf72-201ENST00000379995 VEGFBP49765 207 aa12.35□□□□□ -0.43
C9orf72-201ENST00000379995 DPP8Q6V1X1 898 aaPredicted RBP12.35□□□□□ -0.43
C9orf72-201ENST00000379995 ANKRD13DQ6ZTN6 518 aa12.35□□□□□ -0.43
C9orf72-201ENST00000379995 SUPT20HQ8NEM7 779 aa12.35□□□□□ -0.43
C9orf72-201ENST00000379995 PLBD2Q8NHP8 589 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms