RNA–Protein interactions for RNA: ENST00000378389.5

PRDM16-202, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-202ENST00000378389 CRAMP1Q96RY5 1269 aa25.27■■□□□ 1.64
PRDM16-202ENST00000378389 TSPYL4Q9UJ04 414 aa25.27■■□□□ 1.64
PRDM16-202ENST00000378389 PARP10Q53GL7 1025 aa25.26■■□□□ 1.63
PRDM16-202ENST00000378389 ZBTB3Q9H5J0 574 aa25.26■■□□□ 1.63
PRDM16-202ENST00000378389 TMPOP42166 694 aaKnown RBP25.25■■□□□ 1.63
PRDM16-202ENST00000378389 RIPK4P57078 832 aa25.25■■□□□ 1.63
PRDM16-202ENST00000378389 LMOD3Q0VAK6 560 aa25.25■■□□□ 1.63
PRDM16-202ENST00000378389 COL4A5P29400 1685 aa25.24■■□□□ 1.63
PRDM16-202ENST00000378389 RNF123Q5XPI4 1314 aa25.24■■□□□ 1.63
PRDM16-202ENST00000378389 GPTP24298 496 aa25.24■■□□□ 1.63
PRDM16-202ENST00000378389 SLC10A5Q5PT55 438 aa25.23■■□□□ 1.63
PRDM16-202ENST00000378389 GPC2Q8N158 579 aa25.23■■□□□ 1.63
PRDM16-202ENST00000378389 HACL1Q9UJ83 578 aa25.23■■□□□ 1.63
PRDM16-202ENST00000378389 ANKRD36CQ5JPF3 1778 aa25.23■■□□□ 1.63
PRDM16-202ENST00000378389 COL13A1Q5TAT6 717 aaPredicted RBP25.22■■□□□ 1.63
PRDM16-202ENST00000378389 PPP1R42Q7Z4L9 355 aa25.22■■□□□ 1.63
PRDM16-202ENST00000378389 RPGRQ92834 1020 aaKnown RBP25.22■■□□□ 1.63
PRDM16-202ENST00000378389 ITGBL1O95965 494 aaPredicted RBP25.21■■□□□ 1.63
PRDM16-202ENST00000378389 RBM17Q96I25 401 aaKnown RBP25.21■■□□□ 1.63
PRDM16-202ENST00000378389 MYBBP1AQ9BQG0 1328 aaKnown RBP25.2■■□□□ 1.62
PRDM16-202ENST00000378389 PROSER3Q2NL68 480 aa25.2■■□□□ 1.62
PRDM16-202ENST00000378389 CNTNAP1P78357 1384 aa25.19■■□□□ 1.62
PRDM16-202ENST00000378389 HSPA1AP0DMV8 641 aaKnown RBP25.19■■□□□ 1.62
PRDM16-202ENST00000378389 HSPA1BP0DMV9 641 aaKnown RBP25.19■■□□□ 1.62
PRDM16-202ENST00000378389 EPHX2P34913 555 aa25.19■■□□□ 1.62
PRDM16-202ENST00000378389 C3orf67Q6ZVT6 689 aa25.19■■□□□ 1.62
PRDM16-202ENST00000378389 PNMA8AQ86V59 439 aaPredicted RBP25.19■■□□□ 1.62
PRDM16-202ENST00000378389 CHL1O00533 1208 aa25.18■■□□□ 1.62
PRDM16-202ENST00000378389 JDP2Q8WYK2 163 aa25.18■■□□□ 1.62
PRDM16-202ENST00000378389 PPEF1O14829 653 aaPredicted RBP25.17■■□□□ 1.62
PRDM16-202ENST00000378389 UTP14AQ9BVJ6 771 aaKnown RBP25.17■■□□□ 1.62
PRDM16-202ENST00000378389 VPS33BQ9H267 617 aa25.17■■□□□ 1.62
PRDM16-202ENST00000378389 LAMB2P55268 1798 aa25.16■■□□□ 1.62
PRDM16-202ENST00000378389 EIF2S2P20042 333 aaKnown RBP25.16■■□□□ 1.62
PRDM16-202ENST00000378389 LTBP1Q14766 1721 aa25.16■■□□□ 1.62
PRDM16-202ENST00000378389 HSP90AB3PQ58FF7 597 aa25.16■■□□□ 1.62
PRDM16-202ENST00000378389 NLRP3Q96P20 1036 aa25.16■■□□□ 1.62
PRDM16-202ENST00000378389 DDX21Q9NR30 783 aaKnown RBP eCLIP25.15■■□□□ 1.62
PRDM16-202ENST00000378389 ATP6V0A2Q9Y487 856 aa25.15■■□□□ 1.62
PRDM16-202ENST00000378389 HOXB7P09629 217 aa25.14■■□□□ 1.62
PRDM16-202ENST00000378389 NLRP10Q86W26 655 aa25.14■■□□□ 1.62
PRDM16-202ENST00000378389 RTFDC1Q9BY42 306 aaPredicted RBP25.14■■□□□ 1.62
PRDM16-202ENST00000378389 TRIM35Q9UPQ4 493 aa25.14■■□□□ 1.62
PRDM16-202ENST00000378389 TMEM88BA6NKF7 163 aa25.13■■□□□ 1.61
PRDM16-202ENST00000378389 ANXA1P04083 346 aa25.13■■□□□ 1.61
PRDM16-202ENST00000378389 EIF6P56537 245 aaKnown RBP25.13■■□□□ 1.61
PRDM16-202ENST00000378389 COPS6Q7L5N1 327 aa25.13■■□□□ 1.61
PRDM16-202ENST00000378389 RUNDC1Q96C34 613 aa25.13■■□□□ 1.61
PRDM16-202ENST00000378389 TCIRG1Q13488 830 aa25.12■■□□□ 1.61
PRDM16-202ENST00000378389 EAPPQ56P03 285 aaPredicted RBP25.12■■□□□ 1.61
PRDM16-202ENST00000378389 SLC51AQ86UW1 340 aa25.12■■□□□ 1.61
PRDM16-202ENST00000378389 XAGE3Q8WTP9 111 aa25.12■■□□□ 1.61
PRDM16-202ENST00000378389 MKRN1Q9UHC7 482 aaKnown RBP25.12■■□□□ 1.61
PRDM16-202ENST00000378389 ABCC4O15439 1325 aa25.12■■□□□ 1.61
PRDM16-202ENST00000378389 SCNN1DP51172 638 aa25.11■■□□□ 1.61
PRDM16-202ENST00000378389 LARGE2Q8N3Y3 721 aa25.11■■□□□ 1.61
PRDM16-202ENST00000378389 BBOX1O75936 387 aa25.1■■□□□ 1.61
PRDM16-202ENST00000378389 CNTROBQ8N137 903 aa25.1■■□□□ 1.61
PRDM16-202ENST00000378389 DDX10Q13206 875 aaKnown RBP25.09■■□□□ 1.61
PRDM16-202ENST00000378389 TNS4Q8IZW8 715 aa25.09■■□□□ 1.61
PRDM16-202ENST00000378389 RASSF10A6NK89 507 aa25.08■■□□□ 1.61
PRDM16-202ENST00000378389 SP8Q8IXZ3 490 aa25.08■■□□□ 1.61
PRDM16-202ENST00000378389 CCDC146Q8IYE0 955 aa25.08■■□□□ 1.61
PRDM16-202ENST00000378389 LRRC37AA6NMS7 1700 aa25.08■■□□□ 1.61
PRDM16-202ENST00000378389 KRT24Q2M2I5 525 aa25.07■■□□□ 1.6
PRDM16-202ENST00000378389 NIM1KQ8IY84 436 aa25.07■■□□□ 1.6
PRDM16-202ENST00000378389 SUPT20HQ8NEM7 779 aa25.07■■□□□ 1.6
PRDM16-202ENST00000378389 CLEC11AQ9Y240 323 aa25.07■■□□□ 1.6
PRDM16-202ENST00000378389 SH3TC1Q8TE82 1336 aa25.07■■□□□ 1.6
PRDM16-202ENST00000378389 PPIP5K2O43314 1243 aa25.06■■□□□ 1.6
PRDM16-202ENST00000378389 LMOD1P29536 600 aaPredicted RBP25.06■■□□□ 1.6
PRDM16-202ENST00000378389 MAP1SQ66K74 1059 aaPredicted RBP25.06■■□□□ 1.6
PRDM16-202ENST00000378389 USP50Q70EL3 339 aaPredicted RBP25.06■■□□□ 1.6
PRDM16-202ENST00000378389 GJA3Q9Y6H8 435 aa25.06■■□□□ 1.6
PRDM16-202ENST00000378389 DDX60Q8IY21 1712 aaKnown RBP25.06■■□□□ 1.6
PRDM16-202ENST00000378389 VEGFBP49765 207 aa25.05■■□□□ 1.6
PRDM16-202ENST00000378389 AIMP1Q12904 312 aaKnown RBP25.05■■□□□ 1.6
PRDM16-202ENST00000378389 WDR43Q15061 677 aaKnown RBP eCLIP25.05■■□□□ 1.6
PRDM16-202ENST00000378389 TMC4Q7Z404 712 aa25.05■■□□□ 1.6
PRDM16-202ENST00000378389 PLBD2Q8NHP8 589 aa25.05■■□□□ 1.6
PRDM16-202ENST00000378389 CFAP44Q96MT7 982 aa25.05■■□□□ 1.6
PRDM16-202ENST00000378389 TMX4Q9H1E5 349 aaPredicted RBP25.05■■□□□ 1.6
PRDM16-202ENST00000378389 CHPF2Q9P2E5 772 aa25.05■■□□□ 1.6
PRDM16-202ENST00000378389 ADAMTS8Q9UP79 889 aa25.05■■□□□ 1.6
PRDM16-202ENST00000378389 DUOX1Q9NRD9 1551 aa25.05■■□□□ 1.6
PRDM16-202ENST00000378389 HCLS1P14317 486 aaPredicted RBP25.04■■□□□ 1.6
PRDM16-202ENST00000378389 EPS15P42566 896 aa25.04■■□□□ 1.6
PRDM16-202ENST00000378389 GRAPQ13588 217 aa25.04■■□□□ 1.6
PRDM16-202ENST00000378389 AOC3Q16853 763 aa25.04■■□□□ 1.6
PRDM16-202ENST00000378389 GRAPLQ8TC17 118 aaPredicted RBP25.04■■□□□ 1.6
PRDM16-202ENST00000378389 NECTIN2Q92692 538 aa25.04■■□□□ 1.6
PRDM16-202ENST00000378389 ISCA1Q9BUE6 129 aa25.04■■□□□ 1.6
PRDM16-202ENST00000378389 TRMT112Q9UI30 125 aaKnown RBP25.04■■□□□ 1.6
PRDM16-202ENST00000378389 ZNRF3Q9ULT6 936 aa25.04■■□□□ 1.6
PRDM16-202ENST00000378389 CDHR2Q9BYE9 1310 aa25.04■■□□□ 1.6
PRDM16-202ENST00000378389 KIAA2012Q0VF49 1180 aa25.03■■□□□ 1.6
PRDM16-202ENST00000378389 NEUROD2Q15784 382 aa25.03■■□□□ 1.6
PRDM16-202ENST00000378389 HDGFL1Q5TGJ6 251 aa25.03■■□□□ 1.6
PRDM16-202ENST00000378389 DBF4Q9UBU7 674 aaPredicted RBP25.03■■□□□ 1.6
PRDM16-202ENST00000378389 THSD7BQ9C0I4 1608 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms