RNA–Protein interactions for RNA: ENST00000377883.7

USP30-202, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 5

Gene USP30, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-202ENST00000377883 RIC1Q4ADV7 1423 aa24.46■■□□□ 1.51
USP30-202ENST00000377883 NTSR2O95665 410 aa24.46■■□□□ 1.51
USP30-202ENST00000377883 LRP10Q7Z4F1 713 aa24.46■■□□□ 1.51
USP30-202ENST00000377883 CRAMP1Q96RY5 1269 aa24.46■■□□□ 1.51
USP30-202ENST00000377883 TAF1DQ9H5J8 278 aaPredicted RBP24.46■■□□□ 1.51
USP30-202ENST00000377883 LDHDQ86WU2 507 aa24.45■■□□□ 1.5
USP30-202ENST00000377883 JDP2Q8WYK2 163 aa24.45■■□□□ 1.5
USP30-202ENST00000377883 ZNF541Q9H0D2 1346 aa24.44■■□□□ 1.5
USP30-202ENST00000377883 FZD9O00144 591 aa24.44■■□□□ 1.5
USP30-202ENST00000377883 POTEIP0CG38 1075 aa24.44■■□□□ 1.5
USP30-202ENST00000377883 POTEJP0CG39 1038 aa24.44■■□□□ 1.5
USP30-202ENST00000377883 NEUROD2Q15784 382 aa24.44■■□□□ 1.5
USP30-202ENST00000377883 NLRP3Q96P20 1036 aa24.44■■□□□ 1.5
USP30-202ENST00000377883 UTP14AQ9BVJ6 771 aaKnown RBP24.44■■□□□ 1.5
USP30-202ENST00000377883 HACL1Q9UJ83 578 aa24.44■■□□□ 1.5
USP30-202ENST00000377883 SCN4AP35499 1836 aa24.44■■□□□ 1.5
USP30-202ENST00000377883 WDR43Q15061 677 aaKnown RBP eCLIP24.43■■□□□ 1.5
USP30-202ENST00000377883 HSP90AB3PQ58FF7 597 aa24.43■■□□□ 1.5
USP30-202ENST00000377883 CCDC146Q8IYE0 955 aa24.43■■□□□ 1.5
USP30-202ENST00000377883 RUNDC1Q96C34 613 aa24.43■■□□□ 1.5
USP30-202ENST00000377883 CREBZFQ9NS37 354 aa24.43■■□□□ 1.5
USP30-202ENST00000377883 PROSER3Q2NL68 480 aa24.42■■□□□ 1.5
USP30-202ENST00000377883 SLC10A5Q5PT55 438 aa24.42■■□□□ 1.5
USP30-202ENST00000377883 TMX4Q9H1E5 349 aaPredicted RBP24.42■■□□□ 1.5
USP30-202ENST00000377883 CHL1O00533 1208 aa24.41■■□□□ 1.5
USP30-202ENST00000377883 ANXA1P04083 346 aa24.41■■□□□ 1.5
USP30-202ENST00000377883 COPS6Q7L5N1 327 aa24.41■■□□□ 1.5
USP30-202ENST00000377883 GPC2Q8N158 579 aa24.41■■□□□ 1.5
USP30-202ENST00000377883 PPEF1O14829 653 aaPredicted RBP24.4■■□□□ 1.5
USP30-202ENST00000377883 EIF6P56537 245 aaKnown RBP24.4■■□□□ 1.5
USP30-202ENST00000377883 AIMP1Q12904 312 aaKnown RBP24.4■■□□□ 1.5
USP30-202ENST00000377883 EAPPQ56P03 285 aaPredicted RBP24.4■■□□□ 1.5
USP30-202ENST00000377883 NECTIN2Q92692 538 aa24.4■■□□□ 1.5
USP30-202ENST00000377883 CLEC11AQ9Y240 323 aa24.4■■□□□ 1.5
USP30-202ENST00000377883 RNF123Q5XPI4 1314 aa24.39■■□□□ 1.5
USP30-202ENST00000377883 SNED1Q8TER0 1413 aa24.39■■□□□ 1.5
USP30-202ENST00000377883 EPHX2P34913 555 aa24.39■■□□□ 1.49
USP30-202ENST00000377883 PNMA8AQ86V59 439 aaPredicted RBP24.39■■□□□ 1.49
USP30-202ENST00000377883 XAGE3Q8WTP9 111 aa24.39■■□□□ 1.49
USP30-202ENST00000377883 DDX21Q9NR30 783 aaKnown RBP eCLIP24.39■■□□□ 1.49
USP30-202ENST00000377883 LAS1LQ9Y4W2 734 aaKnown RBP24.39■■□□□ 1.49
USP30-202ENST00000377883 TCERG1O14776 1098 aaKnown RBP24.38■■□□□ 1.49
USP30-202ENST00000377883 C3orf67Q6ZVT6 689 aa24.38■■□□□ 1.49
USP30-202ENST00000377883 LARGE2Q8N3Y3 721 aa24.38■■□□□ 1.49
USP30-202ENST00000377883 TRIM35Q9UPQ4 493 aa24.38■■□□□ 1.49
USP30-202ENST00000377883 TCIRG1Q13488 830 aa24.37■■□□□ 1.49
USP30-202ENST00000377883 ADAMTS8Q9UP79 889 aa24.37■■□□□ 1.49
USP30-202ENST00000377883 PASKQ96RG2 1323 aa24.36■■□□□ 1.49
USP30-202ENST00000377883 NLRP10Q86W26 655 aa24.36■■□□□ 1.49
USP30-202ENST00000377883 ITGBL1O95965 494 aaPredicted RBP24.35■■□□□ 1.49
USP30-202ENST00000377883 COL13A1Q5TAT6 717 aaPredicted RBP24.35■■□□□ 1.49
USP30-202ENST00000377883 VPS33BQ9H267 617 aa24.35■■□□□ 1.49
USP30-202ENST00000377883 ATP6V0A2Q9Y487 856 aa24.35■■□□□ 1.49
USP30-202ENST00000377883 GJA3Q9Y6H8 435 aa24.35■■□□□ 1.49
USP30-202ENST00000377883 BBOX1O75936 387 aa24.34■■□□□ 1.49
USP30-202ENST00000377883 HSPA1AP0DMV8 641 aaKnown RBP24.34■■□□□ 1.49
USP30-202ENST00000377883 HSPA1BP0DMV9 641 aaKnown RBP24.34■■□□□ 1.49
USP30-202ENST00000377883 KRT24Q2M2I5 525 aa24.34■■□□□ 1.49
USP30-202ENST00000377883 MKRN1Q9UHC7 482 aaKnown RBP24.34■■□□□ 1.49
USP30-202ENST00000377883 TRMT112Q9UI30 125 aaKnown RBP24.34■■□□□ 1.49
USP30-202ENST00000377883 HOXB7P09629 217 aa24.33■■□□□ 1.49
USP30-202ENST00000377883 LMOD1P29536 600 aaPredicted RBP24.33■■□□□ 1.49
USP30-202ENST00000377883 NIM1KQ8IY84 436 aa24.33■■□□□ 1.49
USP30-202ENST00000377883 TMEM88BA6NKF7 163 aa24.32■■□□□ 1.48
USP30-202ENST00000377883 HCLS1P14317 486 aaPredicted RBP24.32■■□□□ 1.48
USP30-202ENST00000377883 HDGFL1Q5TGJ6 251 aa24.32■■□□□ 1.48
USP30-202ENST00000377883 SUPT20HQ8NEM7 779 aa24.32■■□□□ 1.48
USP30-202ENST00000377883 CHPF2Q9P2E5 772 aa24.32■■□□□ 1.48
USP30-202ENST00000377883 ABCC4O15439 1325 aa24.32■■□□□ 1.48
USP30-202ENST00000377883 SH3TC1Q8TE82 1336 aa24.32■■□□□ 1.48
USP30-202ENST00000377883 PPIP5K2O43314 1243 aa24.31■■□□□ 1.48
USP30-202ENST00000377883 DDX46Q7L014 1031 aaKnown RBP24.31■■□□□ 1.48
USP30-202ENST00000377883 SP8Q8IXZ3 490 aa24.31■■□□□ 1.48
USP30-202ENST00000377883 CNTROBQ8N137 903 aa24.31■■□□□ 1.48
USP30-202ENST00000377883 CFAP44Q96MT7 982 aa24.31■■□□□ 1.48
USP30-202ENST00000377883 ANKRD13DQ6ZTN6 518 aa24.3■■□□□ 1.48
USP30-202ENST00000377883 PLBD2Q8NHP8 589 aa24.3■■□□□ 1.48
USP30-202ENST00000377883 PRKRIP1Q9H875 184 aaPredicted RBP24.3■■□□□ 1.48
USP30-202ENST00000377883 DBF4Q9UBU7 674 aaPredicted RBP24.3■■□□□ 1.48
USP30-202ENST00000377883 MAP1SQ66K74 1059 aaPredicted RBP24.29■■□□□ 1.48
USP30-202ENST00000377883 RTFDC1Q9BY42 306 aaPredicted RBP24.29■■□□□ 1.48
USP30-202ENST00000377883 SLC51AQ86UW1 340 aa24.28■■□□□ 1.48
USP30-202ENST00000377883 MPNDQ8N594 471 aa24.28■■□□□ 1.48
USP30-202ENST00000377883 HYPKQ9NX55 129 aa24.28■■□□□ 1.48
USP30-202ENST00000377883 CNTNAP1P78357 1384 aa24.28■■□□□ 1.48
USP30-202ENST00000377883 COL4A5P29400 1685 aa24.27■■□□□ 1.48
USP30-202ENST00000377883 GRAPQ13588 217 aa24.27■■□□□ 1.48
USP30-202ENST00000377883 AOC3Q16853 763 aa24.27■■□□□ 1.48
USP30-202ENST00000377883 DUSP27Q5VZP5 1158 aa24.27■■□□□ 1.48
USP30-202ENST00000377883 DPP8Q6V1X1 898 aaPredicted RBP24.27■■□□□ 1.48
USP30-202ENST00000377883 GRAPLQ8TC17 118 aaPredicted RBP24.27■■□□□ 1.48
USP30-202ENST00000377883 ANKRD36CQ5JPF3 1778 aa24.26■■□□□ 1.47
USP30-202ENST00000377883 EPS15P42566 896 aa24.26■■□□□ 1.47
USP30-202ENST00000377883 SCNN1DP51172 638 aa24.26■■□□□ 1.47
USP30-202ENST00000377883 TMC4Q7Z404 712 aa24.26■■□□□ 1.47
USP30-202ENST00000377883 TNS4Q8IZW8 715 aa24.26■■□□□ 1.47
USP30-202ENST00000377883 ZNRF3Q9ULT6 936 aa24.26■■□□□ 1.47
USP30-202ENST00000377883 ADAMTSL1Q8N6G6 1762 aa24.25■■□□□ 1.47
USP30-202ENST00000377883 CALD1Q05682 793 aaKnown RBP24.25■■□□□ 1.47
USP30-202ENST00000377883 USP50Q70EL3 339 aaPredicted RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms