RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 OGFOD1Q8N543 542 aa9.88□□□□□ -0.83
ABCA4-201ENST00000370225 KIAA0754O94854 1291 aa9.88□□□□□ -0.83
ABCA4-201ENST00000370225 HMGB1P09429 215 aaKnown RBP9.88□□□□□ -0.83
ABCA4-201ENST00000370225 KIF5BP33176 963 aa9.88□□□□□ -0.83
ABCA4-201ENST00000370225 MTIF2P46199 727 aaKnown RBP9.88□□□□□ -0.83
ABCA4-201ENST00000370225 BCCIPQ9P287 314 aaKnown RBP eCLIP9.88□□□□□ -0.83
ABCA4-201ENST00000370225 SLC4A4Q9Y6R1 1079 aa9.88□□□□□ -0.83
ABCA4-201ENST00000370225 GJB2P29033 226 aa9.88□□□□□ -0.83
ABCA4-201ENST00000370225 HEATR3Q7Z4Q2 680 aa9.88□□□□□ -0.83
ABCA4-201ENST00000370225 XAGE3Q8WTP9 111 aa9.88□□□□□ -0.83
ABCA4-201ENST00000370225 HDAC9Q9UKV0 1011 aa9.88□□□□□ -0.83
ABCA4-201ENST00000370225 ERLIN1O75477 346 aa9.88□□□□□ -0.83
ABCA4-201ENST00000370225 CCDC40Q4G0X9 1142 aa9.88□□□□□ -0.83
ABCA4-201ENST00000370225 NCKAP5LQ9HCH0 1330 aa9.88□□□□□ -0.83
ABCA4-201ENST00000370225 DENND4BO75064 1496 aaPredicted RBP9.87□□□□□ -0.83
ABCA4-201ENST00000370225 SIRT1Q96EB6 747 aa9.87□□□□□ -0.83
ABCA4-201ENST00000370225 PHAXQ9H814 394 aaKnown RBP9.87□□□□□ -0.83
ABCA4-201ENST00000370225 NKTRP30414 1462 aaKnown RBP9.87□□□□□ -0.83
ABCA4-201ENST00000370225 TRIM27P14373 513 aa9.87□□□□□ -0.83
ABCA4-201ENST00000370225 CASQ1P31415 396 aa9.87□□□□□ -0.83
ABCA4-201ENST00000370225 IARSP41252 1262 aaKnown RBP9.87□□□□□ -0.83
ABCA4-201ENST00000370225 GSTO1P78417 241 aa9.87□□□□□ -0.83
ABCA4-201ENST00000370225 PRPF4BQ13523 1007 aaKnown RBP9.87□□□□□ -0.83
ABCA4-201ENST00000370225 DPH6Q7L8W6 267 aa9.87□□□□□ -0.83
ABCA4-201ENST00000370225 FSIP1Q8NA03 581 aa9.87□□□□□ -0.83
ABCA4-201ENST00000370225 DYDC1Q8WWB3 177 aa9.87□□□□□ -0.83
ABCA4-201ENST00000370225 PARP3Q9Y6F1 533 aa9.87□□□□□ -0.83
ABCA4-201ENST00000370225 TCP11L1Q9NUJ3 509 aa9.87□□□□□ -0.83
ABCA4-201ENST00000370225 GJA3Q9Y6H8 435 aa9.87□□□□□ -0.83
ABCA4-201ENST00000370225 TNRQ92752 1358 aa9.87□□□□□ -0.83
ABCA4-201ENST00000370225 MAP3K9P80192 1104 aa9.87□□□□□ -0.83
ABCA4-201ENST00000370225 VPS36Q86VN1 386 aa9.87□□□□□ -0.83
ABCA4-201ENST00000370225 TTC21BQ7Z4L5 1316 aa9.87□□□□□ -0.83
ABCA4-201ENST00000370225 KIF20AO95235 890 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 TOP1P11387 765 aaKnown RBP9.86□□□□□ -0.83
ABCA4-201ENST00000370225 COPS6Q7L5N1 327 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 POLD1P28340 1107 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 IFIT1BQ5T764 474 aaKnown RBP9.86□□□□□ -0.83
ABCA4-201ENST00000370225 PTPRCP08575 1304 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 HELBQ8NG08 1087 aaPredicted RBP9.86□□□□□ -0.83
ABCA4-201ENST00000370225 CCDC12Q8WUD4 166 aaPredicted RBP9.86□□□□□ -0.83
ABCA4-201ENST00000370225 MPHOSPH6Q99547 160 aaKnown RBP9.86□□□□□ -0.83
ABCA4-201ENST00000370225 UQCRHLA0A096LP55 91 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 UQCRHP07919 91 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 NLRP3Q96P20 1036 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 ECHDC1Q9NTX5 307 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 ZBTB21Q9ULJ3 1066 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 CALM1P0DP23 149 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 CALM2P0DP24 149 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 CALM3P0DP25 149 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 FAM212AQ96EL1 285 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 ZNF408Q9H9D4 720 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 ZRANB1Q9UGI0 708 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 TMCO5BA8MYB1 307 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 UBE4AQ14139 1066 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 LUZP1Q86V48 1076 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 ANO10Q9NW15 660 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 SBNO2Q9Y2G9 1366 aa9.86□□□□□ -0.83
ABCA4-201ENST00000370225 SP4Q02446 784 aa9.85□□□□□ -0.83
ABCA4-201ENST00000370225 AKNAD1Q5T1N1 836 aa9.85□□□□□ -0.83
ABCA4-201ENST00000370225 NCOA7Q8NI08 942 aa9.85□□□□□ -0.83
ABCA4-201ENST00000370225 TRMT1Q9NXH9 659 aaKnown RBP9.85□□□□□ -0.83
ABCA4-201ENST00000370225 PIK3R4Q99570 1358 aa9.85□□□□□ -0.83
ABCA4-201ENST00000370225 EIF3JO75822 258 aaKnown RBP9.85□□□□□ -0.83
ABCA4-201ENST00000370225 FGFR1OPO95684 399 aaKnown RBP9.85□□□□□ -0.83
ABCA4-201ENST00000370225 DZIP3Q86Y13 1208 aaKnown RBP9.85□□□□□ -0.83
ABCA4-201ENST00000370225 BIN2Q9UBW5 565 aaPredicted RBP9.85□□□□□ -0.83
ABCA4-201ENST00000370225 LIMCH1Q9UPQ0 1083 aa9.85□□□□□ -0.83
ABCA4-201ENST00000370225 TERF1P54274 439 aa9.85□□□□□ -0.83
ABCA4-201ENST00000370225 RGS22Q8NE09 1264 aa9.85□□□□□ -0.83
ABCA4-201ENST00000370225 UTP14AQ9BVJ6 771 aaKnown RBP9.85□□□□□ -0.83
ABCA4-201ENST00000370225 HSP90AA4PQ58FG1 418 aa9.85□□□□□ -0.83
ABCA4-201ENST00000370225 NEK1Q96PY6 1258 aa9.85□□□□□ -0.83
ABCA4-201ENST00000370225 ERICH4A6NGS2 130 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 SFPQP23246 707 aaKnown RBP eCLIP9.84□□□□□ -0.83
ABCA4-201ENST00000370225 SSFA2P28290 1259 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 WTAPQ15007 396 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 MIGA1Q8NAN2 632 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 NFATC2IPQ8NCF5 419 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 SH2B1Q9NRF2 756 aaPredicted RBP9.84□□□□□ -0.83
ABCA4-201ENST00000370225 ORC3Q9UBD5 711 aaPredicted RBP9.84□□□□□ -0.83
ABCA4-201ENST00000370225 MCM4P33991 863 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 NOP2P46087 812 aaKnown RBP9.84□□□□□ -0.83
ABCA4-201ENST00000370225 ZNF804AQ7Z570 1209 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 TCEANC2Q96MN5 208 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 SYNCQ9H7C4 482 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 NSFL1CQ9UNZ2 370 aaKnown RBP9.84□□□□□ -0.83
ABCA4-201ENST00000370225 KIF5CO60282 957 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 AFMP43652 599 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 NECAB1Q8N987 351 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 CLIP2Q9UDT6 1046 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 RTCBQ9Y3I0 505 aaKnown RBP9.84□□□□□ -0.83
ABCA4-201ENST00000370225 PPIP5K1Q6PFW1 1433 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 NAA16Q6N069 864 aaPredicted RBP9.84□□□□□ -0.83
ABCA4-201ENST00000370225 TBCAO75347 108 aaKnown RBP9.84□□□□□ -0.83
ABCA4-201ENST00000370225 UBA7P41226 1012 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 MAP2K1Q02750 393 aaPredicted RBP9.84□□□□□ -0.83
ABCA4-201ENST00000370225 IFFO1Q0D2I5 559 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 KIF4BQ2VIQ3 1234 aa9.84□□□□□ -0.83
ABCA4-201ENST00000370225 CCDC91Q7Z6B0 441 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms