RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 ORC3Q9UBD5 711 aaPredicted RBP19.21■□□□□ 0.67
SCAF8-201ENST00000367178 IP6K1Q92551 441 aa19.2■□□□□ 0.66
SCAF8-201ENST00000367178 RAB34Q9BZG1 259 aa19.2■□□□□ 0.66
SCAF8-201ENST00000367178 DCAF5Q96JK2 942 aa19.2■□□□□ 0.66
SCAF8-201ENST00000367178 TNIP1Q15025 636 aa19.2■□□□□ 0.66
SCAF8-201ENST00000367178 SETDB2Q96T68 719 aa19.2■□□□□ 0.66
SCAF8-201ENST00000367178 TFIP11Q9UBB9 837 aaKnown RBP19.2■□□□□ 0.66
SCAF8-201ENST00000367178 KLHL10Q6JEL2 608 aa19.19■□□□□ 0.66
SCAF8-201ENST00000367178 C8orf37Q96NL8 207 aa19.19■□□□□ 0.66
SCAF8-201ENST00000367178 NLRP3Q96P20 1036 aa19.19■□□□□ 0.66
SCAF8-201ENST00000367178 TNNQ9UQP3 1299 aa19.19■□□□□ 0.66
SCAF8-201ENST00000367178 KIF5BP33176 963 aa19.19■□□□□ 0.66
SCAF8-201ENST00000367178 ST5P78524 1137 aa19.19■□□□□ 0.66
SCAF8-201ENST00000367178 PRKCSHP14314 528 aaPredicted RBP19.19■□□□□ 0.66
SCAF8-201ENST00000367178 CCDC144CPQ8IYA2 1237 aa19.19■□□□□ 0.66
SCAF8-201ENST00000367178 ZNF622Q969S3 477 aaKnown RBP eCLIP19.19■□□□□ 0.662e-8■■□□□ 12.4
SCAF8-201ENST00000367178 MAP7D2Q96T17 732 aa19.19■□□□□ 0.66
SCAF8-201ENST00000367178 GDPD2Q9HCC8 539 aa19.19■□□□□ 0.66
SCAF8-201ENST00000367178 CCDC181Q5TID7 509 aa19.18■□□□□ 0.66
SCAF8-201ENST00000367178 NIP7Q9Y221 180 aaKnown RBP eCLIP19.18■□□□□ 0.66
SCAF8-201ENST00000367178 ESPNB1AK53 854 aa19.18■□□□□ 0.66
SCAF8-201ENST00000367178 METAP2P50579 478 aaKnown RBP eCLIP19.18■□□□□ 0.66
SCAF8-201ENST00000367178 RLBP1P12271 317 aa19.18■□□□□ 0.66
SCAF8-201ENST00000367178 BRF1Q92994 677 aa19.18■□□□□ 0.66
SCAF8-201ENST00000367178 PA2G4Q9UQ80 394 aaKnown RBP19.18■□□□□ 0.66
SCAF8-201ENST00000367178 MCM5P33992 734 aa19.17■□□□□ 0.66
SCAF8-201ENST00000367178 KIF21AQ7Z4S6 1674 aa19.17■□□□□ 0.66
SCAF8-201ENST00000367178 DNMT1P26358 1616 aaKnown RBP19.17■□□□□ 0.66
SCAF8-201ENST00000367178 PATL2C9JE40 543 aaKnown RBP19.17■□□□□ 0.66
SCAF8-201ENST00000367178 CTAGE5O15320 804 aa19.17■□□□□ 0.66
SCAF8-201ENST00000367178 TMEM266Q2M3C6 531 aa19.17■□□□□ 0.66
SCAF8-201ENST00000367178 FSIP1Q8NA03 581 aa19.17■□□□□ 0.66
SCAF8-201ENST00000367178 CRNKL1Q9BZJ0 848 aaKnown RBP19.17■□□□□ 0.66
SCAF8-201ENST00000367178 EPB41L2O43491 1005 aaKnown RBP19.17■□□□□ 0.66
SCAF8-201ENST00000367178 SIRT1Q96EB6 747 aa19.17■□□□□ 0.66
SCAF8-201ENST00000367178 PKNOX2Q96KN3 472 aa19.17■□□□□ 0.66
SCAF8-201ENST00000367178 ESYT1Q9BSJ8 1104 aa19.17■□□□□ 0.66
SCAF8-201ENST00000367178 RAB11FIP4Q86YS3 637 aa19.17■□□□□ 0.66
SCAF8-201ENST00000367178 SEPT11Q9NVA2 429 aaKnown RBP19.17■□□□□ 0.66
SCAF8-201ENST00000367178 CWF19L2Q2TBE0 894 aaKnown RBP19.16■□□□□ 0.66
SCAF8-201ENST00000367178 CUL5Q93034 780 aa19.16■□□□□ 0.66
SCAF8-201ENST00000367178 KAT14Q9H8E8 782 aa19.16■□□□□ 0.66
SCAF8-201ENST00000367178 IQSEC3Q9UPP2 1182 aaPredicted RBP19.16■□□□□ 0.66
SCAF8-201ENST00000367178 CKAP2LQ8IYA6 745 aa19.16■□□□□ 0.66
SCAF8-201ENST00000367178 DDX19AQ9NUU7 478 aaKnown RBP19.16■□□□□ 0.66
SCAF8-201ENST00000367178 PPP1R12BO60237 982 aaPredicted RBP19.16■□□□□ 0.66
SCAF8-201ENST00000367178 DZIP3Q86Y13 1208 aaKnown RBP19.16■□□□□ 0.66
SCAF8-201ENST00000367178 CNNM3Q8NE01 707 aa19.16■□□□□ 0.66
SCAF8-201ENST00000367178 PPFIA3O75145 1194 aa19.16■□□□□ 0.66
SCAF8-201ENST00000367178 COL17A1Q9UMD9 1497 aaPredicted RBP19.15■□□□□ 0.66
SCAF8-201ENST00000367178 SFPQP23246 707 aaKnown RBP eCLIP19.15■□□□□ 0.662e-6■■■□□ 17
SCAF8-201ENST00000367178 C16orf71Q8IYS4 520 aaPredicted RBP19.15■□□□□ 0.66
SCAF8-201ENST00000367178 CCDC12Q8WUD4 166 aaPredicted RBP19.15■□□□□ 0.66
SCAF8-201ENST00000367178 RBM8AQ9Y5S9 174 aaKnown RBP19.15■□□□□ 0.66
SCAF8-201ENST00000367178 RNMTO43148 476 aaKnown RBP19.15■□□□□ 0.66
SCAF8-201ENST00000367178 HLA-DOAP06340 250 aa19.15■□□□□ 0.66
SCAF8-201ENST00000367178 CEP85Q6P2H3 762 aa19.15■□□□□ 0.66
SCAF8-201ENST00000367178 DCTPP1Q9H773 170 aa19.15■□□□□ 0.66
SCAF8-201ENST00000367178 CYP7A1P22680 504 aa19.15■□□□□ 0.66
SCAF8-201ENST00000367178 MATR3P43243 847 aaKnown RBP eCLIP19.15■□□□□ 0.662e-6■■■□□ 15.9
SCAF8-201ENST00000367178 TMX3Q96JJ7 454 aa19.15■□□□□ 0.66
SCAF8-201ENST00000367178 UHRF1BP1Q6BDS2 1440 aa19.15■□□□□ 0.66
SCAF8-201ENST00000367178 ARHGAP29Q52LW3 1261 aa19.15■□□□□ 0.66
SCAF8-201ENST00000367178 UTP14AQ9BVJ6 771 aaKnown RBP19.14■□□□□ 0.66
SCAF8-201ENST00000367178 MCMDC2Q4G0Z9 681 aa19.14■□□□□ 0.65
SCAF8-201ENST00000367178 SLC26A6Q9BXS9 759 aa19.14■□□□□ 0.65
SCAF8-201ENST00000367178 ATP10AO60312 1499 aa19.14■□□□□ 0.65
SCAF8-201ENST00000367178 KLF18A0A0U1RQI7 1052 aa19.14■□□□□ 0.65
SCAF8-201ENST00000367178 PAF1Q8N7H5 531 aa19.14■□□□□ 0.65
SCAF8-201ENST00000367178 ATP7AQ04656 1500 aa19.14■□□□□ 0.65
SCAF8-201ENST00000367178 GSTO1P78417 241 aa19.14■□□□□ 0.65
SCAF8-201ENST00000367178 TCEANC2Q96MN5 208 aa19.14■□□□□ 0.65
SCAF8-201ENST00000367178 FEZ1Q99689 392 aa19.14■□□□□ 0.65
SCAF8-201ENST00000367178 VAT1LQ9HCJ6 419 aa19.14■□□□□ 0.65
SCAF8-201ENST00000367178 ADGRL2O95490 1459 aa19.13■□□□□ 0.65
SCAF8-201ENST00000367178 SLC4A8Q2Y0W8 1093 aa19.13■□□□□ 0.65
SCAF8-201ENST00000367178 STX8Q9UNK0 236 aa19.13■□□□□ 0.65
SCAF8-201ENST00000367178 BAG4O95429 457 aaKnown RBP19.13■□□□□ 0.65
SCAF8-201ENST00000367178 CABP5Q9NP86 173 aa19.13■□□□□ 0.65
SCAF8-201ENST00000367178 ZBTB40Q9NUA8 1239 aa19.13■□□□□ 0.65
SCAF8-201ENST00000367178 ERLIN2O94905 339 aa19.13■□□□□ 0.65
SCAF8-201ENST00000367178 ANAPC15P60006 121 aa19.13■□□□□ 0.65
SCAF8-201ENST00000367178 SKIDA1Q1XH10 827 aa19.13■□□□□ 0.65
SCAF8-201ENST00000367178 SLC9C2Q5TAH2 1124 aa19.13■□□□□ 0.65
SCAF8-201ENST00000367178 WTAPQ15007 396 aa19.12■□□□□ 0.65
SCAF8-201ENST00000367178 ZNF397Q8NF99 534 aaPredicted RBP19.12■□□□□ 0.65
SCAF8-201ENST00000367178 KIAA1328Q86T90 577 aa19.12■□□□□ 0.65
SCAF8-201ENST00000367178 NECAB1Q8N987 351 aa19.12■□□□□ 0.65
SCAF8-201ENST00000367178 SOS1Q07889 1333 aaPredicted RBP19.12■□□□□ 0.65
SCAF8-201ENST00000367178 DDX21Q9NR30 783 aaKnown RBP eCLIP19.12■□□□□ 0.65
SCAF8-201ENST00000367178 LRRC2Q9BYS8 371 aa19.12■□□□□ 0.65
SCAF8-201ENST00000367178 PCDH11XQ9BZA7 1347 aa19.12■□□□□ 0.65
SCAF8-201ENST00000367178 PCDH11YQ9BZA8 1340 aa19.12■□□□□ 0.65
SCAF8-201ENST00000367178 AXDND1Q5T1B0 1012 aaPredicted RBP19.11■□□□□ 0.65
SCAF8-201ENST00000367178 ZSCAN30Q86W11 494 aa19.11■□□□□ 0.65
SCAF8-201ENST00000367178 TSG101Q99816 390 aa19.11■□□□□ 0.65
SCAF8-201ENST00000367178 KRT23Q9C075 422 aa19.11■□□□□ 0.65
SCAF8-201ENST00000367178 SLC4A4Q9Y6R1 1079 aa19.11■□□□□ 0.65
SCAF8-201ENST00000367178 KAT6BQ8WYB5 2073 aa19.11■□□□□ 0.65
SCAF8-201ENST00000367178 UBA5Q9GZZ9 404 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms