RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 VTI1BQ9UEU0 232 aa7.9□□□□□ -1.14
RPL39-201ENST00000361575 TNFRSF21O75509 655 aa7.89□□□□□ -1.15
RPL39-201ENST00000361575 RHOQP17081 205 aa7.89□□□□□ -1.15
RPL39-201ENST00000361575 TATP17735 454 aaPredicted RBP7.89□□□□□ -1.15
RPL39-201ENST00000361575 MSX1P28360 303 aa7.89□□□□□ -1.15
RPL39-201ENST00000361575 ERCC5P28715 1186 aaPredicted RBP7.89□□□□□ -1.15
RPL39-201ENST00000361575 HIF1AQ16665 826 aa7.89□□□□□ -1.15
RPL39-201ENST00000361575 WDR44Q5JSH3 913 aa7.89□□□□□ -1.15
RPL39-201ENST00000361575 MRPL14Q6P1L8 145 aaKnown RBP7.89□□□□□ -1.15
RPL39-201ENST00000361575 XKR5Q6UX68 686 aa7.89□□□□□ -1.15
RPL39-201ENST00000361575 PI16Q6UXB8 463 aa7.89□□□□□ -1.15
RPL39-201ENST00000361575 PIK3R5Q8WYR1 880 aa7.89□□□□□ -1.15
RPL39-201ENST00000361575 DNAJC25Q9H1X3 360 aa7.89□□□□□ -1.15
RPL39-201ENST00000361575 MRS2Q9HD23 443 aa7.89□□□□□ -1.15
RPL39-201ENST00000361575 FAM13BQ9NYF5 915 aa7.89□□□□□ -1.15
RPL39-201ENST00000361575 RTCBQ9Y3I0 505 aaKnown RBP7.89□□□□□ -1.15
RPL39-201ENST00000361575 BMP2P12643 396 aa7.88□□□□□ -1.15
RPL39-201ENST00000361575 PCSK2P16519 638 aa7.88□□□□□ -1.15
RPL39-201ENST00000361575 IRS1P35568 1242 aa7.88□□□□□ -1.15
RPL39-201ENST00000361575 ARSDP51689 593 aa7.88□□□□□ -1.15
RPL39-201ENST00000361575 NAALADL2Q58DX5 795 aa7.88□□□□□ -1.15
RPL39-201ENST00000361575 LRRC69Q6ZNQ3 347 aa7.88□□□□□ -1.15
RPL39-201ENST00000361575 LYSMD3Q7Z3D4 306 aa7.88□□□□□ -1.15
RPL39-201ENST00000361575 BCL11AQ9H165 835 aa7.88□□□□□ -1.15
RPL39-201ENST00000361575 AK5Q9Y6K8 562 aa7.88□□□□□ -1.15
RPL39-201ENST00000361575 CPNE3O75131 537 aaKnown RBP7.87□□□□□ -1.15
RPL39-201ENST00000361575 BMP1P13497 986 aa7.87□□□□□ -1.15
RPL39-201ENST00000361575 TYRO3Q06418 890 aa7.87□□□□□ -1.15
RPL39-201ENST00000361575 BICDL1Q6ZP65 573 aa7.87□□□□□ -1.15
RPL39-201ENST00000361575 NT5DC4Q86YG4 428 aa7.87□□□□□ -1.15
RPL39-201ENST00000361575 TMEM63CQ9P1W3 806 aa7.87□□□□□ -1.15
RPL39-201ENST00000361575 SOS2Q07890 1332 aaPredicted RBP7.86□□□□□ -1.15
RPL39-201ENST00000361575 A0A1B0GTH6 734 aa7.86□□□□□ -1.15
RPL39-201ENST00000361575 A0A1W2PNR3 127 aa7.86□□□□□ -1.15
RPL39-201ENST00000361575 UPP2O95045 317 aa7.86□□□□□ -1.15
RPL39-201ENST00000361575 RPLP1P05386 114 aaKnown RBP7.86□□□□□ -1.15
RPL39-201ENST00000361575 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.86□□□□□ -1.151e-11■■■■■ 65.1
RPL39-201ENST00000361575 TRIM46Q7Z4K8 759 aa7.86□□□□□ -1.15
RPL39-201ENST00000361575 EPS8L3Q8TE67 593 aaKnown RBP7.86□□□□□ -1.15
RPL39-201ENST00000361575 OSBPL7Q9BZF2 842 aa7.86□□□□□ -1.15
RPL39-201ENST00000361575 CHRDQ9H2X0 955 aa7.86□□□□□ -1.15
RPL39-201ENST00000361575 TIMMDC1Q9NPL8 285 aa7.86□□□□□ -1.15
RPL39-201ENST00000361575 METTL5Q9NRN9 209 aaKnown RBP7.86□□□□□ -1.15
RPL39-201ENST00000361575 TTLL8A6PVC2 850 aa7.85□□□□□ -1.15
RPL39-201ENST00000361575 AVPP01185 164 aa7.85□□□□□ -1.15
RPL39-201ENST00000361575 PDE12Q6L8Q7 609 aaKnown RBP7.85□□□□□ -1.15
RPL39-201ENST00000361575 CMTR1Q8N1G2 835 aaKnown RBP7.85□□□□□ -1.15
RPL39-201ENST00000361575 SNX29Q8TEQ0 813 aa7.85□□□□□ -1.15
RPL39-201ENST00000361575 SREK1Q8WXA9 508 aaKnown RBP7.85□□□□□ -1.15
RPL39-201ENST00000361575 CCDC74AQ96AQ1 378 aa7.85□□□□□ -1.15
RPL39-201ENST00000361575 CRELD1Q96HD1 420 aa7.85□□□□□ -1.15
RPL39-201ENST00000361575 ZFYVE28Q9HCC9 887 aa7.85□□□□□ -1.15
RPL39-201ENST00000361575 ANKIB1Q9P2G1 1089 aa7.85□□□□□ -1.15
RPL39-201ENST00000361575 FIGNL2A6NMB9 653 aa7.84□□□□□ -1.15
RPL39-201ENST00000361575 UBAP1LF5GYI3 381 aa7.84□□□□□ -1.15
RPL39-201ENST00000361575 THBS1P07996 1170 aa7.84□□□□□ -1.15
RPL39-201ENST00000361575 ARSJQ5FYB0 599 aaPredicted RBP7.84□□□□□ -1.15
RPL39-201ENST00000361575 ZNF438Q7Z4V0 828 aa7.84□□□□□ -1.15
RPL39-201ENST00000361575 CRISPLD1Q9H336 500 aa7.84□□□□□ -1.15
RPL39-201ENST00000361575 ELP3Q9H9T3 547 aa7.84□□□□□ -1.15
RPL39-201ENST00000361575 NEFLP07196 543 aa7.83□□□□□ -1.16
RPL39-201ENST00000361575 ZNF76P36508 570 aa7.83□□□□□ -1.16
RPL39-201ENST00000361575 RNF34Q969K3 372 aa7.83□□□□□ -1.16
RPL39-201ENST00000361575 FRMD6Q96NE9 622 aa7.83□□□□□ -1.16
RPL39-201ENST00000361575 TINF2Q9BSI4 451 aa7.83□□□□□ -1.16
RPL39-201ENST00000361575 RUBCNLQ9H714 662 aa7.83□□□□□ -1.16
RPL39-201ENST00000361575 GPAMQ9HCL2 828 aa7.83□□□□□ -1.16
RPL39-201ENST00000361575 CNTN3Q9P232 1028 aa7.83□□□□□ -1.16
RPL39-201ENST00000361575 DNMT3LQ9UJW3 386 aa7.83□□□□□ -1.16
RPL39-201ENST00000361575 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.83□□□□□ -1.16
RPL39-201ENST00000361575 SHROOM4Q9ULL8 1493 aa7.82□□□□□ -1.16
RPL39-201ENST00000361575 SENP3-EIF4A1A0A087X0R7 540 aa7.82□□□□□ -1.16
RPL39-201ENST00000361575 POLR3DP05423 398 aaPredicted RBP7.82□□□□□ -1.16
RPL39-201ENST00000361575 TTC16Q8NEE8 873 aa7.82□□□□□ -1.16
RPL39-201ENST00000361575 ZCCHC2Q9C0B9 1178 aaKnown RBP7.82□□□□□ -1.16
RPL39-201ENST00000361575 C12orf49Q9H741 205 aa7.82□□□□□ -1.16
RPL39-201ENST00000361575 PDZRN3Q9UPQ7 1066 aa7.82□□□□□ -1.16
RPL39-201ENST00000361575 SPG7Q9UQ90 795 aa7.82□□□□□ -1.16
RPL39-201ENST00000361575 EREGO14944 169 aa7.81□□□□□ -1.16
RPL39-201ENST00000361575 XYLBO75191 536 aa7.81□□□□□ -1.16
RPL39-201ENST00000361575 EGFRP00533 1210 aa7.81□□□□□ -1.16
RPL39-201ENST00000361575 EIF4BP23588 611 aaKnown RBP7.81□□□□□ -1.16
RPL39-201ENST00000361575 C1orf127Q8N9H9 656 aa7.81□□□□□ -1.16
RPL39-201ENST00000361575 DRC1Q96MC2 740 aa7.81□□□□□ -1.16
RPL39-201ENST00000361575 TGIF2Q9GZN2 237 aa7.81□□□□□ -1.16
RPL39-201ENST00000361575 NPHS2Q9NP85 383 aa7.81□□□□□ -1.16
RPL39-201ENST00000361575 HCN2Q9UL51 889 aa7.81□□□□□ -1.16
RPL39-201ENST00000361575 FNDC3AQ9Y2H6 1198 aaKnown RBP7.81□□□□□ -1.16
RPL39-201ENST00000361575 FAM187AA6NFU0 413 aa7.8□□□□□ -1.16
RPL39-201ENST00000361575 PHACTR2O75167 634 aa7.8□□□□□ -1.16
RPL39-201ENST00000361575 SAMD5Q5TGI4 173 aa7.8□□□□□ -1.16
RPL39-201ENST00000361575 MEI1Q5TIA1 1274 aa7.8□□□□□ -1.16
RPL39-201ENST00000361575 ZFP42Q96MM3 310 aa7.8□□□□□ -1.16
RPL39-201ENST00000361575 CEP63Q96MT8 703 aa7.8□□□□□ -1.16
RPL39-201ENST00000361575 ACBD3Q9H3P7 528 aa7.8□□□□□ -1.16
RPL39-201ENST00000361575 DYRK1BQ9Y463 629 aa7.8□□□□□ -1.16
RPL39-201ENST00000361575 ITGAEP38570 1179 aa7.79□□□□□ -1.16
RPL39-201ENST00000361575 TNNI2P48788 182 aa7.79□□□□□ -1.16
RPL39-201ENST00000361575 VEGFBP49765 207 aa7.79□□□□□ -1.16
RPL39-201ENST00000361575 RACK1P63244 317 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms