RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 DBNDD2Q9BQY9 259 aa17.27■□□□□ 0.36
RET-201ENST00000340058 SH2B1Q9NRF2 756 aaPredicted RBP17.27■□□□□ 0.36
RET-201ENST00000340058 ZNF652Q9Y2D9 606 aa17.27■□□□□ 0.36
RET-201ENST00000340058 MAP3K11Q16584 847 aa17.26■□□□□ 0.35
RET-201ENST00000340058 CAVIN4Q5BKX8 364 aa17.26■□□□□ 0.35
RET-201ENST00000340058 SUCLG2Q96I99 432 aa17.26■□□□□ 0.35
RET-201ENST00000340058 CHAMP1Q96JM3 812 aa17.26■□□□□ 0.35
RET-201ENST00000340058 CTDP1Q9Y5B0 961 aaPredicted RBP17.26■□□□□ 0.35
RET-201ENST00000340058 UBAP1LF5GYI3 381 aa17.26■□□□□ 0.35
RET-201ENST00000340058 AK2P54819 239 aa17.26■□□□□ 0.35
RET-201ENST00000340058 ANKRD20A12PQ8NF67 263 aa17.26■□□□□ 0.35
RET-201ENST00000340058 NOC3LQ8WTT2 800 aaKnown RBP17.26■□□□□ 0.35
RET-201ENST00000340058 FAM227BQ96M60 508 aa17.26■□□□□ 0.35
RET-201ENST00000340058 SERPINC1P01008 464 aa17.26■□□□□ 0.35
RET-201ENST00000340058 DDB1Q16531 1140 aa17.26■□□□□ 0.35
RET-201ENST00000340058 PROSER3Q2NL68 480 aa17.26■□□□□ 0.35
RET-201ENST00000340058 FAM173BQ6P4H8 233 aa17.26■□□□□ 0.35
RET-201ENST00000340058 SLC5A1P13866 664 aa17.25■□□□□ 0.35
RET-201ENST00000340058 LETM1O95202 739 aaPredicted RBP17.25■□□□□ 0.35
RET-201ENST00000340058 HCLS1P14317 486 aaPredicted RBP17.25■□□□□ 0.35
RET-201ENST00000340058 NIP7Q9Y221 180 aaKnown RBP eCLIP17.25■□□□□ 0.35
RET-201ENST00000340058 GSPT1P15170 499 aaKnown RBP17.25■□□□□ 0.35
RET-201ENST00000340058 SLC9C2Q5TAH2 1124 aa17.24■□□□□ 0.35
RET-201ENST00000340058 JMYQ8N9B5 988 aa17.24■□□□□ 0.35
RET-201ENST00000340058 ORC3Q9UBD5 711 aaPredicted RBP17.24■□□□□ 0.35
RET-201ENST00000340058 XRCC6P12956 609 aaKnown RBP eCLIP17.24■□□□□ 0.35
RET-201ENST00000340058 USP5P45974 858 aa17.24■□□□□ 0.35
RET-201ENST00000340058 DNM1Q05193 864 aaKnown RBP17.24■□□□□ 0.35
RET-201ENST00000340058 KDM5DQ9BY66 1539 aa17.24■□□□□ 0.35
RET-201ENST00000340058 DHX8Q14562 1220 aaKnown RBP17.24■□□□□ 0.35
RET-201ENST00000340058 CCDC47Q96A33 483 aaKnown RBP17.24■□□□□ 0.35
RET-201ENST00000340058 TCEAL9Q9UHQ7 104 aa17.24■□□□□ 0.35
RET-201ENST00000340058 RXRAP19793 462 aa17.23■□□□□ 0.35
RET-201ENST00000340058 DNAJC10Q8IXB1 793 aa17.23■□□□□ 0.35
RET-201ENST00000340058 ZHX3Q9H4I2 956 aa17.23■□□□□ 0.35
RET-201ENST00000340058 ZCCHC11Q5TAX3 1644 aaKnown RBP17.23■□□□□ 0.35
RET-201ENST00000340058 C6orf229H3BNL8 230 aa17.23■□□□□ 0.35
RET-201ENST00000340058 DZIP3Q86Y13 1208 aaKnown RBP17.23■□□□□ 0.35
RET-201ENST00000340058 DZIP1Q86YF9 867 aaKnown RBP17.23■□□□□ 0.35
RET-201ENST00000340058 BCORL1Q5H9F3 1711 aa17.23■□□□□ 0.35
RET-201ENST00000340058 IPO7O95373 1038 aaKnown RBP17.23■□□□□ 0.35
RET-201ENST00000340058 PREX2Q70Z35 1606 aa17.22■□□□□ 0.35
RET-201ENST00000340058 KLF18A0A0U1RQI7 1052 aa17.22■□□□□ 0.35
RET-201ENST00000340058 SSBP05455 408 aaKnown RBP eCLIP17.22■□□□□ 0.35
RET-201ENST00000340058 KLHL10Q6JEL2 608 aa17.22■□□□□ 0.35
RET-201ENST00000340058 VSIG10Q8N0Z9 540 aa17.22■□□□□ 0.35
RET-201ENST00000340058 CDC42BPAQ5VT25 1732 aa17.22■□□□□ 0.35
RET-201ENST00000340058 Q6ZUG5 572 aa17.22■□□□□ 0.35
RET-201ENST00000340058 MKNK2Q9HBH9 465 aa17.22■□□□□ 0.35
RET-201ENST00000340058 ZFYVE16Q7Z3T8 1539 aa17.22■□□□□ 0.35
RET-201ENST00000340058 MIGA1Q8NAN2 632 aa17.22■□□□□ 0.35
RET-201ENST00000340058 TEX13AQ9BXU3 409 aaPredicted RBP17.21■□□□□ 0.35
RET-201ENST00000340058 SLC12A7Q9Y666 1083 aa17.21■□□□□ 0.35
RET-201ENST00000340058 GOLGA8AA7E2F4 631 aa17.21■□□□□ 0.35
RET-201ENST00000340058 IL15P40933 162 aaPredicted RBP17.21■□□□□ 0.35
RET-201ENST00000340058 TMEM67Q5HYA8 995 aa17.21■□□□□ 0.35
RET-201ENST00000340058 USP48Q86UV5 1035 aa17.21■□□□□ 0.35
RET-201ENST00000340058 SNX21Q969T3 373 aa17.21■□□□□ 0.35
RET-201ENST00000340058 SCAND2PQ9GZW5 306 aaPredicted RBP17.21■□□□□ 0.35
RET-201ENST00000340058 PAG1Q9NWQ8 432 aa17.21■□□□□ 0.35
RET-201ENST00000340058 MLH3Q9UHC1 1453 aa17.21■□□□□ 0.35
RET-201ENST00000340058 IRS4O14654 1257 aaPredicted RBP17.21■□□□□ 0.35
RET-201ENST00000340058 CREB3L3Q68CJ9 461 aa17.21■□□□□ 0.35
RET-201ENST00000340058 TSPOAP1O95153 1857 aa17.21■□□□□ 0.34
RET-201ENST00000340058 CDKL5O76039 1030 aa17.2■□□□□ 0.34
RET-201ENST00000340058 TPM2P07951 284 aa17.2■□□□□ 0.34
RET-201ENST00000340058 ZSCAN23Q3MJ62 389 aa17.2■□□□□ 0.34
RET-201ENST00000340058 MCMDC2Q4G0Z9 681 aa17.2■□□□□ 0.34
RET-201ENST00000340058 NBPF5PQ86XG9 351 aaPredicted RBP17.2■□□□□ 0.34
RET-201ENST00000340058 FSIP1Q8NA03 581 aa17.2■□□□□ 0.34
RET-201ENST00000340058 GIGYF1O75420 1035 aaPredicted RBP17.2■□□□□ 0.34
RET-201ENST00000340058 PRIM1P49642 420 aaKnown RBP17.2■□□□□ 0.34
RET-201ENST00000340058 KLHL40Q2TBA0 621 aa17.2■□□□□ 0.34
RET-201ENST00000340058 ZNF830Q96NB3 372 aaPredicted RBP17.2■□□□□ 0.34
RET-201ENST00000340058 SLC52A2Q9HAB3 445 aa17.2■□□□□ 0.34
RET-201ENST00000340058 INSRP06213 1382 aa17.2■□□□□ 0.34
RET-201ENST00000340058 ZSCAN22P10073 491 aaPredicted RBP17.2■□□□□ 0.34
RET-201ENST00000340058 CCDC183Q5T5S1 534 aa17.2■□□□□ 0.34
RET-201ENST00000340058 ABCC4O15439 1325 aa17.19■□□□□ 0.34
RET-201ENST00000340058 APOBRQ0VD83 1088 aa17.19■□□□□ 0.34
RET-201ENST00000340058 CEP57L1Q8IYX8 460 aa17.19■□□□□ 0.34
RET-201ENST00000340058 SLAIN2Q9P270 581 aa17.19■□□□□ 0.34
RET-201ENST00000340058 NAP1L1P55209 391 aaKnown RBP17.19■□□□□ 0.34
RET-201ENST00000340058 TTLL7Q6ZT98 887 aa17.19■□□□□ 0.34
RET-201ENST00000340058 RTL1A6NKG5 1358 aa17.18■□□□□ 0.34
RET-201ENST00000340058 HSP90AA4PQ58FG1 418 aa17.18■□□□□ 0.34
RET-201ENST00000340058 SIRT2Q8IXJ6 389 aa17.18■□□□□ 0.34
RET-201ENST00000340058 VAT1LQ9HCJ6 419 aa17.18■□□□□ 0.34
RET-201ENST00000340058 MPHOSPH10O00566 681 aaKnown RBP17.18■□□□□ 0.34
RET-201ENST00000340058 CCDC43Q96MW1 224 aaKnown RBP17.18■□□□□ 0.34
RET-201ENST00000340058 METTL22Q9BUU2 404 aaPredicted RBP17.18■□□□□ 0.34
RET-201ENST00000340058 SLC26A6Q9BXS9 759 aa17.18■□□□□ 0.34
RET-201ENST00000340058 PALD1Q9ULE6 856 aa17.18■□□□□ 0.34
RET-201ENST00000340058 CYP7A1P22680 504 aa17.17■□□□□ 0.34
RET-201ENST00000340058 GCKRQ14397 625 aa17.17■□□□□ 0.34
RET-201ENST00000340058 MNS1Q8NEH6 495 aa17.17■□□□□ 0.34
RET-201ENST00000340058 A0A1B0GUL7 405 aa17.17■□□□□ 0.34
RET-201ENST00000340058 UNC5CLQ8IV45 518 aa17.17■□□□□ 0.34
RET-201ENST00000340058 CDK5RAP3Q96JB5 506 aa17.17■□□□□ 0.34
RET-201ENST00000340058 CDC5LQ99459 802 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms