RNA–Protein interactions for RNA: ENST00000324677.11

SSH2-202, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-202ENST00000324677 COL13A1Q5TAT6 717 aaPredicted RBP26.08■■□□□ 1.77
SSH2-202ENST00000324677 CC2D2BQ6DHV5 1058 aa26.08■■□□□ 1.77
SSH2-202ENST00000324677 CREBZFQ9NS37 354 aa26.08■■□□□ 1.77
SSH2-202ENST00000324677 ANKRD36CQ5JPF3 1778 aa26.07■■□□□ 1.76
SSH2-202ENST00000324677 EIF2S2P20042 333 aaKnown RBP26.07■■□□□ 1.76
SSH2-202ENST00000324677 TMPOP42166 694 aaKnown RBP26.07■■□□□ 1.76
SSH2-202ENST00000324677 ADAMTSL1Q8N6G6 1762 aa26.07■■□□□ 1.76
SSH2-202ENST00000324677 LMOD3Q0VAK6 560 aa26.06■■□□□ 1.76
SSH2-202ENST00000324677 PPP1R42Q7Z4L9 355 aa26.06■■□□□ 1.76
SSH2-202ENST00000324677 HACL1Q9UJ83 578 aa26.06■■□□□ 1.76
SSH2-202ENST00000324677 PARP10Q53GL7 1025 aa26.05■■□□□ 1.76
SSH2-202ENST00000324677 RBM17Q96I25 401 aaKnown RBP26.05■■□□□ 1.76
SSH2-202ENST00000324677 CRAMP1Q96RY5 1269 aa26.05■■□□□ 1.76
SSH2-202ENST00000324677 PASKQ96RG2 1323 aa26.05■■□□□ 1.76
SSH2-202ENST00000324677 COL4A5P29400 1685 aa26.04■■□□□ 1.76
SSH2-202ENST00000324677 HSPA1AP0DMV8 641 aaKnown RBP26.04■■□□□ 1.76
SSH2-202ENST00000324677 HSPA1BP0DMV9 641 aaKnown RBP26.04■■□□□ 1.76
SSH2-202ENST00000324677 PROSER3Q2NL68 480 aa26.04■■□□□ 1.76
SSH2-202ENST00000324677 LAMB2P55268 1798 aa26.03■■□□□ 1.76
SSH2-202ENST00000324677 ANXA1P04083 346 aa26.03■■□□□ 1.76
SSH2-202ENST00000324677 GRIPAP1Q4V328 841 aa26.03■■□□□ 1.76
SSH2-202ENST00000324677 EAPPQ56P03 285 aaPredicted RBP26.03■■□□□ 1.76
SSH2-202ENST00000324677 C3orf67Q6ZVT6 689 aa26.03■■□□□ 1.76
SSH2-202ENST00000324677 GPC2Q8N158 579 aa26.03■■□□□ 1.76
SSH2-202ENST00000324677 JDP2Q8WYK2 163 aa26.03■■□□□ 1.76
SSH2-202ENST00000324677 EPHX2P34913 555 aa26.02■■□□□ 1.76
SSH2-202ENST00000324677 RNF123Q5XPI4 1314 aa26.02■■□□□ 1.76
SSH2-202ENST00000324677 MYBBP1AQ9BQG0 1328 aaKnown RBP26.02■■□□□ 1.76
SSH2-202ENST00000324677 PPEF1O14829 653 aaPredicted RBP26.01■■□□□ 1.75
SSH2-202ENST00000324677 NLRP3Q96P20 1036 aa26.01■■□□□ 1.75
SSH2-202ENST00000324677 MKRN1Q9UHC7 482 aaKnown RBP26.01■■□□□ 1.75
SSH2-202ENST00000324677 ITGBL1O95965 494 aaPredicted RBP26■■□□□ 1.75
SSH2-202ENST00000324677 DDX10Q13206 875 aaKnown RBP26■■□□□ 1.75
SSH2-202ENST00000324677 SLC10A5Q5PT55 438 aa26■■□□□ 1.75
SSH2-202ENST00000324677 SLC51AQ86UW1 340 aa26■■□□□ 1.75
SSH2-202ENST00000324677 PNMA8AQ86V59 439 aaPredicted RBP26■■□□□ 1.75
SSH2-202ENST00000324677 UTP14AQ9BVJ6 771 aaKnown RBP26■■□□□ 1.75
SSH2-202ENST00000324677 TCERG1O14776 1098 aaKnown RBP25.99■■□□□ 1.75
SSH2-202ENST00000324677 CCDC146Q8IYE0 955 aa25.99■■□□□ 1.75
SSH2-202ENST00000324677 NECTIN2Q92692 538 aa25.99■■□□□ 1.75
SSH2-202ENST00000324677 CLEC11AQ9Y240 323 aa25.99■■□□□ 1.75
SSH2-202ENST00000324677 EIF6P56537 245 aaKnown RBP25.98■■□□□ 1.75
SSH2-202ENST00000324677 NEUROD2Q15784 382 aa25.98■■□□□ 1.75
SSH2-202ENST00000324677 COPS6Q7L5N1 327 aa25.98■■□□□ 1.75
SSH2-202ENST00000324677 LTBP1Q14766 1721 aa25.97■■□□□ 1.75
SSH2-202ENST00000324677 CNTNAP1P78357 1384 aa25.97■■□□□ 1.75
SSH2-202ENST00000324677 LARGE2Q8N3Y3 721 aa25.97■■□□□ 1.75
SSH2-202ENST00000324677 XAGE3Q8WTP9 111 aa25.97■■□□□ 1.75
SSH2-202ENST00000324677 CHL1O00533 1208 aa25.96■■□□□ 1.75
SSH2-202ENST00000324677 AIMP1Q12904 312 aaKnown RBP25.96■■□□□ 1.75
SSH2-202ENST00000324677 HSP90AB3PQ58FF7 597 aa25.96■■□□□ 1.75
SSH2-202ENST00000324677 RUNDC1Q96C34 613 aa25.96■■□□□ 1.75
SSH2-202ENST00000324677 GJA3Q9Y6H8 435 aa25.96■■□□□ 1.75
SSH2-202ENST00000324677 TMEM88BA6NKF7 163 aa25.95■■□□□ 1.74
SSH2-202ENST00000324677 KRT24Q2M2I5 525 aa25.95■■□□□ 1.74
SSH2-202ENST00000324677 NLRP10Q86W26 655 aa25.95■■□□□ 1.74
SSH2-202ENST00000324677 DDX21Q9NR30 783 aaKnown RBP eCLIP25.95■■□□□ 1.74
SSH2-202ENST00000324677 TRIM35Q9UPQ4 493 aa25.95■■□□□ 1.74
SSH2-202ENST00000324677 ATP6V0A2Q9Y487 856 aa25.95■■□□□ 1.74
SSH2-202ENST00000324677 ABCC4O15439 1325 aa25.94■■□□□ 1.74
SSH2-202ENST00000324677 MAP1SQ66K74 1059 aaPredicted RBP25.94■■□□□ 1.74
SSH2-202ENST00000324677 TNS4Q8IZW8 715 aa25.94■■□□□ 1.74
SSH2-202ENST00000324677 TAF1P21675 1872 aa25.94■■□□□ 1.74
SSH2-202ENST00000324677 TCIRG1Q13488 830 aa25.93■■□□□ 1.74
SSH2-202ENST00000324677 WDR43Q15061 677 aaKnown RBP eCLIP25.93■■□□□ 1.74
SSH2-202ENST00000324677 CNTROBQ8N137 903 aa25.93■■□□□ 1.74
SSH2-202ENST00000324677 TMX4Q9H1E5 349 aaPredicted RBP25.93■■□□□ 1.74
SSH2-202ENST00000324677 LAS1LQ9Y4W2 734 aaKnown RBP25.93■■□□□ 1.74
SSH2-202ENST00000324677 PPIP5K2O43314 1243 aa25.91■■□□□ 1.74
SSH2-202ENST00000324677 HCLS1P14317 486 aaPredicted RBP25.91■■□□□ 1.74
SSH2-202ENST00000324677 LMOD1P29536 600 aaPredicted RBP25.91■■□□□ 1.74
SSH2-202ENST00000324677 SCNN1DP51172 638 aa25.91■■□□□ 1.74
SSH2-202ENST00000324677 NIM1KQ8IY84 436 aa25.91■■□□□ 1.74
SSH2-202ENST00000324677 VPS33BQ9H267 617 aa25.91■■□□□ 1.74
SSH2-202ENST00000324677 AOC3Q16853 763 aa25.9■■□□□ 1.74
SSH2-202ENST00000324677 CHPF2Q9P2E5 772 aa25.9■■□□□ 1.74
SSH2-202ENST00000324677 TRMT112Q9UI30 125 aaKnown RBP25.9■■□□□ 1.74
SSH2-202ENST00000324677 DDX60Q8IY21 1712 aaKnown RBP25.9■■□□□ 1.74
SSH2-202ENST00000324677 BBOX1O75936 387 aa25.89■■□□□ 1.74
SSH2-202ENST00000324677 EPS15P42566 896 aa25.89■■□□□ 1.74
SSH2-202ENST00000324677 RTFDC1Q9BY42 306 aaPredicted RBP25.89■■□□□ 1.74
SSH2-202ENST00000324677 ADAMTS8Q9UP79 889 aa25.89■■□□□ 1.74
SSH2-202ENST00000324677 SH3TC1Q8TE82 1336 aa25.88■■□□□ 1.73
SSH2-202ENST00000324677 VEGFBP49765 207 aa25.88■■□□□ 1.73
SSH2-202ENST00000324677 HDGFL1Q5TGJ6 251 aa25.88■■□□□ 1.73
SSH2-202ENST00000324677 SP8Q8IXZ3 490 aa25.88■■□□□ 1.73
SSH2-202ENST00000324677 SUPT20HQ8NEM7 779 aa25.88■■□□□ 1.73
SSH2-202ENST00000324677 TRPM7Q96QT4 1865 aa25.87■■□□□ 1.73
SSH2-202ENST00000324677 HOXB7P09629 217 aa25.87■■□□□ 1.73
SSH2-202ENST00000324677 DPP8Q6V1X1 898 aaPredicted RBP25.86■■□□□ 1.73
SSH2-202ENST00000324677 DDX46Q7L014 1031 aaKnown RBP25.86■■□□□ 1.73
SSH2-202ENST00000324677 GRAPQ13588 217 aa25.85■■□□□ 1.73
SSH2-202ENST00000324677 USP50Q70EL3 339 aaPredicted RBP25.85■■□□□ 1.73
SSH2-202ENST00000324677 PLBD2Q8NHP8 589 aa25.85■■□□□ 1.73
SSH2-202ENST00000324677 GRAPLQ8TC17 118 aaPredicted RBP25.85■■□□□ 1.73
SSH2-202ENST00000324677 CFAP44Q96MT7 982 aa25.85■■□□□ 1.73
SSH2-202ENST00000324677 DBF4Q9UBU7 674 aaPredicted RBP25.85■■□□□ 1.73
SSH2-202ENST00000324677 ZNRF3Q9ULT6 936 aa25.85■■□□□ 1.73
SSH2-202ENST00000324677 RASSF10A6NK89 507 aa25.84■■□□□ 1.73
SSH2-202ENST00000324677 LRRC37AA6NMS7 1700 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms