RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 MYD88Q99836 296 aa15.71■□□□□ 0.1
CLCN6-201ENST00000312413 KIAA0753Q2KHM9 967 aa15.7■□□□□ 0.1
CLCN6-201ENST00000312413 CAVIN4Q5BKX8 364 aa15.7■□□□□ 0.1
CLCN6-201ENST00000312413 UBA7P41226 1012 aa15.7■□□□□ 0.1
CLCN6-201ENST00000312413 NSRP1Q9H0G5 558 aaKnown RBP15.7■□□□□ 0.1
CLCN6-201ENST00000312413 OPA1O60313 960 aa15.7■□□□□ 0.1
CLCN6-201ENST00000312413 CYLC1P35663 651 aaPredicted RBP15.7■□□□□ 0.1
CLCN6-201ENST00000312413 ANKRD18BA2A2Z9 1011 aa15.7■□□□□ 0.1
CLCN6-201ENST00000312413 CAPN2P17655 700 aa15.7■□□□□ 0.1
CLCN6-201ENST00000312413 SYKP43405 635 aa15.7■□□□□ 0.1
CLCN6-201ENST00000312413 HS1BP3Q53T59 392 aa15.7■□□□□ 0.1
CLCN6-201ENST00000312413 ATRIPQ8WXE1 791 aa15.7■□□□□ 0.1
CLCN6-201ENST00000312413 CCDC94Q9BW85 323 aaPredicted RBP15.7■□□□□ 0.1
CLCN6-201ENST00000312413 CTAGE1Q96RT6 745 aa15.69■□□□□ 0.1
CLCN6-201ENST00000312413 STARD3NLO95772 234 aa15.69■□□□□ 0.1
CLCN6-201ENST00000312413 ZNF444Q8N0Y2 327 aaPredicted RBP15.69■□□□□ 0.1
CLCN6-201ENST00000312413 EHBP1L1Q8N3D4 1523 aa15.69■□□□□ 0.1
CLCN6-201ENST00000312413 CCDC6Q16204 474 aa15.69■□□□□ 0.1
CLCN6-201ENST00000312413 PPP4R3AQ6IN85 833 aa15.69■□□□□ 0.1
CLCN6-201ENST00000312413 DDX12PQ92771 950 aa15.68■□□□□ 0.1
CLCN6-201ENST00000312413 TRIM47Q96LD4 638 aa15.68■□□□□ 0.1
CLCN6-201ENST00000312413 TTC12Q9H892 705 aaPredicted RBP15.68■□□□□ 0.1
CLCN6-201ENST00000312413 CCDC61Q9Y6R9 512 aa15.68■□□□□ 0.1
CLCN6-201ENST00000312413 USP48Q86UV5 1035 aa15.68■□□□□ 0.1
CLCN6-201ENST00000312413 IFIT5Q13325 482 aaKnown RBP15.68■□□□□ 0.1
CLCN6-201ENST00000312413 CCDC96Q2M329 555 aa15.68■□□□□ 0.1
CLCN6-201ENST00000312413 SPTY2D1Q68D10 685 aaPredicted RBP15.68■□□□□ 0.1
CLCN6-201ENST00000312413 RMND1Q9NWS8 449 aa15.68■□□□□ 0.1
CLCN6-201ENST00000312413 DNMBPQ6XZF7 1577 aa15.68■□□□□ 0.1
CLCN6-201ENST00000312413 SPAG1Q07617 926 aa15.68■□□□□ 0.1
CLCN6-201ENST00000312413 MICALL1Q8N3F8 863 aa15.68■□□□□ 0.1
CLCN6-201ENST00000312413 CNPY2Q9Y2B0 182 aa15.68■□□□□ 0.1
CLCN6-201ENST00000312413 SYNJ2O15056 1496 aa15.67■□□□□ 0.1
CLCN6-201ENST00000312413 GOLGA1Q92805 767 aa15.67■□□□□ 0.1
CLCN6-201ENST00000312413 EBAG9O00559 213 aa15.67■□□□□ 0.1
CLCN6-201ENST00000312413 METAP2P50579 478 aaKnown RBP eCLIP15.67■□□□□ 0.1
CLCN6-201ENST00000312413 TMEM67Q5HYA8 995 aa15.67■□□□□ 0.1
CLCN6-201ENST00000312413 TMOD2Q9NZR1 351 aa15.67■□□□□ 0.1
CLCN6-201ENST00000312413 MSL1Q68DK7 614 aa15.67■□□□□ 0.1
CLCN6-201ENST00000312413 KCNG4Q8TDN1 519 aa15.67■□□□□ 0.1
CLCN6-201ENST00000312413 A0A1W2PRG0 241 aa15.66■□□□□ 0.1
CLCN6-201ENST00000312413 IKBKGQ9Y6K9 419 aa15.66■□□□□ 0.1
CLCN6-201ENST00000312413 TOPBP1Q92547 1522 aa15.66■□□□□ 0.1
CLCN6-201ENST00000312413 TUBB4BP68371 445 aa15.66■□□□□ 0.1
CLCN6-201ENST00000312413 FLIIQ13045 1269 aa15.66■□□□□ 0.1
CLCN6-201ENST00000312413 MICU3Q86XE3 530 aa15.66■□□□□ 0.1
CLCN6-201ENST00000312413 PRC1O43663 620 aa15.66■□□□□ 0.1
CLCN6-201ENST00000312413 CRACR2BQ8N4Y2 399 aaPredicted RBP15.66■□□□□ 0.1
CLCN6-201ENST00000312413 MRPS27Q92552 414 aaKnown RBP15.66■□□□□ 0.1
CLCN6-201ENST00000312413 CUL5Q93034 780 aa15.66■□□□□ 0.1
CLCN6-201ENST00000312413 DRC1Q96MC2 740 aa15.66■□□□□ 0.1
CLCN6-201ENST00000312413 PLVAPQ9BX97 442 aa15.66■□□□□ 0.1
CLCN6-201ENST00000312413 DACT1Q9NYF0 836 aa15.66■□□□□ 0.1
CLCN6-201ENST00000312413 PIP4K2BP78356 416 aa15.66■□□□□ 0.1
CLCN6-201ENST00000312413 HDAC1Q13547 482 aaPredicted RBP15.66■□□□□ 0.1
CLCN6-201ENST00000312413 NUDT16Q96DE0 195 aaKnown RBP15.66■□□□□ 0.1
CLCN6-201ENST00000312413 LRRC27Q9C0I9 530 aa15.66■□□□□ 0.1
CLCN6-201ENST00000312413 PRDM11Q9NQV5 511 aa15.66■□□□□ 0.1
CLCN6-201ENST00000312413 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.66■□□□□ 0.1
CLCN6-201ENST00000312413 V9GYY5 206 aaPredicted RBP15.66■□□□□ 0.1
CLCN6-201ENST00000312413 SYT1P21579 422 aa15.65■□□□□ 0.1
CLCN6-201ENST00000312413 DZIP1Q86YF9 867 aaKnown RBP15.65■□□□□ 0.1
CLCN6-201ENST00000312413 NCOA7Q8NI08 942 aa15.65■□□□□ 0.1
CLCN6-201ENST00000312413 SNX21Q969T3 373 aa15.65■□□□□ 0.1
CLCN6-201ENST00000312413 SLC5A1P13866 664 aa15.65■□□□□ 0.1
CLCN6-201ENST00000312413 KIF5BP33176 963 aa15.65■□□□□ 0.1
CLCN6-201ENST00000312413 NUCB1Q02818 461 aa15.65■□□□□ 0.1
CLCN6-201ENST00000312413 STXBP4Q6ZWJ1 553 aa15.65■□□□□ 0.1
CLCN6-201ENST00000312413 PPP1R14CQ8TAE6 165 aa15.65■□□□□ 0.1
CLCN6-201ENST00000312413 DNAJC25Q9H1X3 360 aa15.65■□□□□ 0.1
CLCN6-201ENST00000312413 HYPKQ9NX55 129 aa15.65■□□□□ 0.1
CLCN6-201ENST00000312413 DBF4Q9UBU7 674 aaPredicted RBP15.65■□□□□ 0.1
CLCN6-201ENST00000312413 CTAGE9A4FU28 777 aa15.65■□□□□ 0.1
CLCN6-201ENST00000312413 PRIM1P49642 420 aaKnown RBP15.65■□□□□ 0.1
CLCN6-201ENST00000312413 ANKS4BQ8N8V4 417 aa15.65■□□□□ 0.1
CLCN6-201ENST00000312413 CCDC172P0C7W6 258 aa15.65■□□□□ 0.1
CLCN6-201ENST00000312413 CCDC144CPQ8IYA2 1237 aa15.65■□□□□ 0.1
CLCN6-201ENST00000312413 AOPEPQ8N6M6 819 aa15.65■□□□□ 0.1
CLCN6-201ENST00000312413 ACTN2P35609 894 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 CCDC121Q6ZUS5 278 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 THEMISQ8N1K5 641 aaPredicted RBP15.64■□□□□ 0.09
CLCN6-201ENST00000312413 TACC1O75410 805 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 KIF4AO95239 1232 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 RRAGBQ5VZM2 374 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 OTUD6BQ8N6M0 293 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 NECAB1Q8N987 351 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 SLC26A6Q9BXS9 759 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 TTC31Q49AM3 519 aaPredicted RBP15.64■□□□□ 0.09
CLCN6-201ENST00000312413 BICDL1Q6ZP65 573 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 BRF1Q92994 677 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 SPAG5Q96R06 1193 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 SELENOOQ9BVL4 669 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 DAPK1P53355 1430 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 EFCAB5A4FU69 1503 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 FERP16591 822 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 CEP57Q86XR8 500 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 KCNH5Q8NCM2 988 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 FEZ1Q99689 392 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 EXOC1Q9NV70 894 aa15.64■□□□□ 0.09
CLCN6-201ENST00000312413 SDSP20132 328 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms