RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 NOB1Q9ULX3 412 aaKnown RBP16.41■□□□□ 0.22
SPRED1-201ENST00000299084 GOLGA8AA7E2F4 631 aa16.41■□□□□ 0.22
SPRED1-201ENST00000299084 GOLGA8BA8MQT2 603 aa16.41■□□□□ 0.22
SPRED1-201ENST00000299084 SLC4A8Q2Y0W8 1093 aa16.41■□□□□ 0.22
SPRED1-201ENST00000299084 CGNQ9P2M7 1197 aaKnown RBP16.41■□□□□ 0.22
SPRED1-201ENST00000299084 PYM1Q9BRP8 204 aaKnown RBP16.41■□□□□ 0.22
SPRED1-201ENST00000299084 GOLGA6L9A6NEM1 432 aa16.41■□□□□ 0.22
SPRED1-201ENST00000299084 SLC8A3P57103 927 aa16.41■□□□□ 0.22
SPRED1-201ENST00000299084 IFIT3O14879 490 aaKnown RBP16.4■□□□□ 0.22
SPRED1-201ENST00000299084 TMCO4Q5TGY1 634 aa16.4■□□□□ 0.22
SPRED1-201ENST00000299084 JDP2Q8WYK2 163 aa16.4■□□□□ 0.22
SPRED1-201ENST00000299084 CKAP4Q07065 602 aaKnown RBP16.4■□□□□ 0.22
SPRED1-201ENST00000299084 GOLGA1Q92805 767 aa16.4■□□□□ 0.22
SPRED1-201ENST00000299084 NCAPGQ9BPX3 1015 aa16.4■□□□□ 0.22
SPRED1-201ENST00000299084 SEPT10Q9P0V9 454 aa16.4■□□□□ 0.22
SPRED1-201ENST00000299084 C8orf76Q96K31 380 aa16.4■□□□□ 0.22
SPRED1-201ENST00000299084 MAATS1Q7Z4T9 603 aa16.4■□□□□ 0.22
SPRED1-201ENST00000299084 WDR63Q8IWG1 891 aa16.4■□□□□ 0.22
SPRED1-201ENST00000299084 TOP1P11387 765 aaKnown RBP16.4■□□□□ 0.22
SPRED1-201ENST00000299084 IDEP14735 1019 aa16.4■□□□□ 0.22
SPRED1-201ENST00000299084 CTR9Q6PD62 1173 aa16.4■□□□□ 0.22
SPRED1-201ENST00000299084 ATP2A1O14983 1001 aa16.4■□□□□ 0.22
SPRED1-201ENST00000299084 ATP6V1E1P36543 226 aa16.4■□□□□ 0.22
SPRED1-201ENST00000299084 PPP1R42Q7Z4L9 355 aa16.39■□□□□ 0.21
SPRED1-201ENST00000299084 TBC1D31Q96DN5 1066 aa16.39■□□□□ 0.21
SPRED1-201ENST00000299084 MRVI1Q9Y6F6 885 aa16.39■□□□□ 0.21
SPRED1-201ENST00000299084 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.39■□□□□ 0.21
SPRED1-201ENST00000299084 GNAT3A8MTJ3 354 aa16.39■□□□□ 0.21
SPRED1-201ENST00000299084 RNF34Q969K3 372 aa16.39■□□□□ 0.21
SPRED1-201ENST00000299084 FEZ2Q9UHY8 353 aaPredicted RBP16.39■□□□□ 0.21
SPRED1-201ENST00000299084 FAM184BQ9ULE4 1060 aa16.39■□□□□ 0.21
SPRED1-201ENST00000299084 XRCC6P12956 609 aaKnown RBP eCLIP16.39■□□□□ 0.21
SPRED1-201ENST00000299084 CEP112Q8N8E3 955 aa16.39■□□□□ 0.21
SPRED1-201ENST00000299084 SMC6Q96SB8 1091 aa16.39■□□□□ 0.21
SPRED1-201ENST00000299084 RASAL2Q9UJF2 1139 aa16.39■□□□□ 0.21
SPRED1-201ENST00000299084 KIF3CO14782 793 aa16.39■□□□□ 0.21
SPRED1-201ENST00000299084 URI1O94763 535 aaPredicted RBP16.39■□□□□ 0.21
SPRED1-201ENST00000299084 HMGB1P09429 215 aaKnown RBP16.39■□□□□ 0.21
SPRED1-201ENST00000299084 MNAT1P51948 309 aa16.38■□□□□ 0.21
SPRED1-201ENST00000299084 VEZTQ9HBM0 779 aa16.38■□□□□ 0.21
SPRED1-201ENST00000299084 CFAP157Q5JU67 520 aa16.38■□□□□ 0.21
SPRED1-201ENST00000299084 CNNM3Q8NE01 707 aa16.38■□□□□ 0.21
SPRED1-201ENST00000299084 EEF2P13639 858 aaKnown RBP16.38■□□□□ 0.21
SPRED1-201ENST00000299084 CNGA1P29973 690 aa16.38■□□□□ 0.21
SPRED1-201ENST00000299084 EXOC1Q9NV70 894 aa16.38■□□□□ 0.21
SPRED1-201ENST00000299084 ZBED9Q6R2W3 1325 aa16.38■□□□□ 0.21
SPRED1-201ENST00000299084 SCAPERQ9BY12 1400 aa16.38■□□□□ 0.21
SPRED1-201ENST00000299084 GIPC1O14908 333 aa16.37■□□□□ 0.21
SPRED1-201ENST00000299084 ZGPATQ8N5A5 531 aaKnown RBP16.37■□□□□ 0.21
SPRED1-201ENST00000299084 ARID5AQ03989 594 aa16.37■□□□□ 0.21
SPRED1-201ENST00000299084 MAP3K11Q16584 847 aa16.37■□□□□ 0.21
SPRED1-201ENST00000299084 FAM13AO94988 1023 aa16.37■□□□□ 0.21
SPRED1-201ENST00000299084 RBM26Q5T8P6 1007 aaKnown RBP16.37■□□□□ 0.21
SPRED1-201ENST00000299084 CALCOCO1Q9P1Z2 691 aa16.37■□□□□ 0.21
SPRED1-201ENST00000299084 SMARCC1Q92922 1105 aaPredicted RBP16.37■□□□□ 0.21
SPRED1-201ENST00000299084 SFPQP23246 707 aaKnown RBP eCLIP16.37■□□□□ 0.21
SPRED1-201ENST00000299084 TTF1Q15361 905 aaPredicted RBP16.37■□□□□ 0.21
SPRED1-201ENST00000299084 PTPN14Q15678 1187 aa16.37■□□□□ 0.21
SPRED1-201ENST00000299084 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
SPRED1-201ENST00000299084 ERCC5P28715 1186 aaPredicted RBP16.36■□□□□ 0.21
SPRED1-201ENST00000299084 GTF2F1P35269 517 aaKnown RBP eCLIP16.36■□□□□ 0.21
SPRED1-201ENST00000299084 GTF3C6Q969F1 213 aa16.36■□□□□ 0.21
SPRED1-201ENST00000299084 TSPY3P0CV98 308 aa16.36■□□□□ 0.21
SPRED1-201ENST00000299084 TSPY8P0CW00 308 aa16.36■□□□□ 0.21
SPRED1-201ENST00000299084 GABPB2Q8TAK5 448 aaPredicted RBP16.36■□□□□ 0.21
SPRED1-201ENST00000299084 SELENOOQ9BVL4 669 aa16.36■□□□□ 0.21
SPRED1-201ENST00000299084 BCAR3O75815 825 aa16.36■□□□□ 0.21
SPRED1-201ENST00000299084 PRPHP41219 470 aa16.36■□□□□ 0.21
SPRED1-201ENST00000299084 MYD88Q99836 296 aa16.36■□□□□ 0.21
SPRED1-201ENST00000299084 RPGRIP1LQ68CZ1 1315 aa16.36■□□□□ 0.21
SPRED1-201ENST00000299084 UBA7P41226 1012 aa16.36■□□□□ 0.21
SPRED1-201ENST00000299084 LRPPRCP42704 1394 aaKnown RBP16.36■□□□□ 0.21
SPRED1-201ENST00000299084 GAPVD1Q14C86 1478 aa16.36■□□□□ 0.21
SPRED1-201ENST00000299084 FANCIQ9NVI1 1328 aa16.36■□□□□ 0.21
SPRED1-201ENST00000299084 ATP2A2P16615 1042 aaKnown RBP16.35■□□□□ 0.21
SPRED1-201ENST00000299084 CCDC50Q8IVM0 306 aa16.35■□□□□ 0.21
SPRED1-201ENST00000299084 ZNF408Q9H9D4 720 aa16.35■□□□□ 0.21
SPRED1-201ENST00000299084 NBPF6Q5VWK0 638 aa16.35■□□□□ 0.21
SPRED1-201ENST00000299084 NBPF5PQ86XG9 351 aaPredicted RBP16.35■□□□□ 0.21
SPRED1-201ENST00000299084 NBPF4Q96M43 638 aa16.35■□□□□ 0.21
SPRED1-201ENST00000299084 CRNKL1Q9BZJ0 848 aaKnown RBP16.35■□□□□ 0.21
SPRED1-201ENST00000299084 RASA3Q14644 834 aa16.35■□□□□ 0.21
SPRED1-201ENST00000299084 CCDC114Q96M63 670 aa16.35■□□□□ 0.21
SPRED1-201ENST00000299084 KIF2AO00139 706 aaPredicted RBP16.35■□□□□ 0.21
SPRED1-201ENST00000299084 ANO10Q9NW15 660 aa16.35■□□□□ 0.21
SPRED1-201ENST00000299084 C6orf50Q9HD87 102 aa16.35■□□□□ 0.21
SPRED1-201ENST00000299084 RTEL1-TNFRSF6BF6WH68 1400 aa16.35■□□□□ 0.21
SPRED1-201ENST00000299084 GJC1P36383 396 aa16.34■□□□□ 0.21
SPRED1-201ENST00000299084 TNNI2P48788 182 aa16.34■□□□□ 0.21
SPRED1-201ENST00000299084 CAMK4Q16566 473 aa16.34■□□□□ 0.21
SPRED1-201ENST00000299084 TRIM6Q9C030 488 aaPredicted RBP16.34■□□□□ 0.21
SPRED1-201ENST00000299084 FLIIQ13045 1269 aa16.34■□□□□ 0.21
SPRED1-201ENST00000299084 NSRP1Q9H0G5 558 aaKnown RBP16.34■□□□□ 0.21
SPRED1-201ENST00000299084 CFAP70Q5T0N1 1121 aa16.34■□□□□ 0.21
SPRED1-201ENST00000299084 WDR66Q8TBY9 1149 aa16.34■□□□□ 0.21
SPRED1-201ENST00000299084 DNAAF4Q8WXU2 420 aa16.34■□□□□ 0.21
SPRED1-201ENST00000299084 JADE2Q9NQC1 790 aa16.33■□□□□ 0.21
SPRED1-201ENST00000299084 CALM1P0DP23 149 aa16.33■□□□□ 0.21
SPRED1-201ENST00000299084 CALM2P0DP24 149 aa16.33■□□□□ 0.21
SPRED1-201ENST00000299084 CALM3P0DP25 149 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms