RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 IFNL2Q8IZJ0 200 aa11.6□□□□□ -0.55
PDCD4-201ENST00000280154 ZCRB1Q8TBF4 217 aaKnown RBP11.6□□□□□ -0.55
PDCD4-201ENST00000280154 DYTNA2CJ06 578 aa11.59□□□□□ -0.55
PDCD4-201ENST00000280154 RBM6P78332 1123 aaKnown RBP11.59□□□□□ -0.55
PDCD4-201ENST00000280154 HS6ST3Q8IZP7 471 aa11.58□□□□□ -0.56
PDCD4-201ENST00000280154 OTUD6BQ8N6M0 293 aa11.58□□□□□ -0.56
PDCD4-201ENST00000280154 HMOX1P09601 288 aa11.58□□□□□ -0.56
PDCD4-201ENST00000280154 NBPF20Q3BBV1 942 aa11.58□□□□□ -0.56
PDCD4-201ENST00000280154 SLC52A2Q9HAB3 445 aa11.58□□□□□ -0.56
PDCD4-201ENST00000280154 MYH14Q7Z406 1995 aaKnown RBP11.57□□□□□ -0.56
PDCD4-201ENST00000280154 MARCH10Q8NA82 808 aaPredicted RBP11.57□□□□□ -0.56
PDCD4-201ENST00000280154 KIF13BQ9NQT8 1826 aa11.57□□□□□ -0.56
PDCD4-201ENST00000280154 TOM1L2Q6ZVM7 507 aa11.57□□□□□ -0.56
PDCD4-201ENST00000280154 KCNV2Q8TDN2 545 aa11.57□□□□□ -0.56
PDCD4-201ENST00000280154 LRRC27Q9C0I9 530 aa11.57□□□□□ -0.56
PDCD4-201ENST00000280154 FRMD4BQ9Y2L6 1034 aa11.56□□□□□ -0.56
PDCD4-201ENST00000280154 MAPK8IP3Q9UPT6 1336 aa11.56□□□□□ -0.56
PDCD4-201ENST00000280154 CREB3O43889 395 aa11.56□□□□□ -0.56
PDCD4-201ENST00000280154 RIPK4P57078 832 aa11.56□□□□□ -0.56
PDCD4-201ENST00000280154 LRP10Q7Z4F1 713 aa11.56□□□□□ -0.56
PDCD4-201ENST00000280154 RAPGEF4Q8WZA2 1011 aa11.56□□□□□ -0.56
PDCD4-201ENST00000280154 U2SURPO15042 1029 aaKnown RBP11.55□□□□□ -0.56
PDCD4-201ENST00000280154 USHBP1Q8N6Y0 703 aa11.55□□□□□ -0.56
PDCD4-201ENST00000280154 RMI1Q9H9A7 625 aa11.55□□□□□ -0.56
PDCD4-201ENST00000280154 DIS3Q9Y2L1 958 aaKnown RBP11.55□□□□□ -0.56
PDCD4-201ENST00000280154 FANCIQ9NVI1 1328 aa11.55□□□□□ -0.56
PDCD4-201ENST00000280154 C8orf37Q96NL8 207 aa11.55□□□□□ -0.56
PDCD4-201ENST00000280154 NLRP2Q9NX02 1062 aa11.55□□□□□ -0.56
PDCD4-201ENST00000280154 GOLGA2Q08379 1002 aa11.54□□□□□ -0.56
PDCD4-201ENST00000280154 NGLY1Q96IV0 654 aa11.54□□□□□ -0.56
PDCD4-201ENST00000280154 PDCL3Q9H2J4 239 aa11.54□□□□□ -0.56
PDCD4-201ENST00000280154 ERBB4Q15303 1308 aa11.54□□□□□ -0.56
PDCD4-201ENST00000280154 ADAMTS2O95450 1211 aa11.54□□□□□ -0.56
PDCD4-201ENST00000280154 GNAI1P63096 354 aa11.54□□□□□ -0.56
PDCD4-201ENST00000280154 SF3A1Q15459 793 aaKnown RBP11.54□□□□□ -0.56
PDCD4-201ENST00000280154 CCDC146Q8IYE0 955 aa11.54□□□□□ -0.56
PDCD4-201ENST00000280154 NUP98P52948 1817 aa11.54□□□□□ -0.56
PDCD4-201ENST00000280154 ILDR1Q86SU0 546 aaPredicted RBP11.54□□□□□ -0.56
PDCD4-201ENST00000280154 SPATA32Q96LK8 384 aa11.54□□□□□ -0.56
PDCD4-201ENST00000280154 TAF7Q15545 349 aaPredicted RBP11.53□□□□□ -0.56
PDCD4-201ENST00000280154 TTC30AQ86WT1 665 aa11.53□□□□□ -0.56
PDCD4-201ENST00000280154 VASPP50552 380 aaPredicted RBP11.53□□□□□ -0.56
PDCD4-201ENST00000280154 HMGN5P82970 282 aaKnown RBP11.53□□□□□ -0.56
PDCD4-201ENST00000280154 FAM43AQ8N2R8 423 aa11.53□□□□□ -0.56
PDCD4-201ENST00000280154 EVA1CP58658 441 aa11.53□□□□□ -0.56
PDCD4-201ENST00000280154 ALDH1L2Q3SY69 923 aa11.53□□□□□ -0.56
PDCD4-201ENST00000280154 HELBQ8NG08 1087 aaPredicted RBP11.53□□□□□ -0.56
PDCD4-201ENST00000280154 DLEC1Q9Y238 1755 aa11.53□□□□□ -0.56
PDCD4-201ENST00000280154 ZNF530Q6P9A1 599 aaPredicted RBP11.52□□□□□ -0.56
PDCD4-201ENST00000280154 QTRT2Q9H974 415 aaKnown RBP11.52□□□□□ -0.56
PDCD4-201ENST00000280154 PUF60Q9UHX1 559 aaKnown RBP11.52□□□□□ -0.56
PDCD4-201ENST00000280154 KIAA1551Q9HCM1 1747 aa11.52□□□□□ -0.57
PDCD4-201ENST00000280154 NUTM2BA6NNL0 878 aaPredicted RBP11.52□□□□□ -0.57
PDCD4-201ENST00000280154 NUTM2EB1AL46 878 aaPredicted RBP11.52□□□□□ -0.57
PDCD4-201ENST00000280154 EIF4A1P60842 406 aaKnown RBP11.52□□□□□ -0.57
PDCD4-201ENST00000280154 SF3B2Q13435 895 aaKnown RBP11.52□□□□□ -0.57
PDCD4-201ENST00000280154 MEX3CQ5U5Q3 659 aaKnown RBP11.52□□□□□ -0.57
PDCD4-201ENST00000280154 POTEAQ6S8J7 498 aa11.52□□□□□ -0.57
PDCD4-201ENST00000280154 NUTM2AQ8IVF1 878 aaPredicted RBP11.52□□□□□ -0.57
PDCD4-201ENST00000280154 MICALL1Q8N3F8 863 aa11.52□□□□□ -0.57
PDCD4-201ENST00000280154 CXorf38Q8TB03 319 aa11.52□□□□□ -0.57
PDCD4-201ENST00000280154 PMM1Q92871 262 aa11.52□□□□□ -0.57
PDCD4-201ENST00000280154 A0A1B0GUL6 1792 aa11.52□□□□□ -0.57
PDCD4-201ENST00000280154 ATP10DQ9P241 1426 aa11.52□□□□□ -0.57
PDCD4-201ENST00000280154 CCDC189A1A4V9 331 aa11.52□□□□□ -0.57
PDCD4-201ENST00000280154 TNNT3P45378 269 aaPredicted RBP11.52□□□□□ -0.57
PDCD4-201ENST00000280154 GPATCH3Q96I76 525 aa11.52□□□□□ -0.57
PDCD4-201ENST00000280154 LGR6Q9HBX8 967 aa11.52□□□□□ -0.57
PDCD4-201ENST00000280154 MBIPQ9NS73 344 aa11.52□□□□□ -0.57
PDCD4-201ENST00000280154 NBPF9Q3BBW0 867 aa11.51□□□□□ -0.57
PDCD4-201ENST00000280154 DDX60Q8IY21 1712 aaKnown RBP11.51□□□□□ -0.57
PDCD4-201ENST00000280154 CENPOQ9BU64 300 aa11.51□□□□□ -0.57
PDCD4-201ENST00000280154 AFDNP55196 1824 aaKnown RBP11.51□□□□□ -0.57
PDCD4-201ENST00000280154 ARHGEF1Q92888 912 aaKnown RBP11.5□□□□□ -0.57
PDCD4-201ENST00000280154 COL15A1P39059 1388 aa11.5□□□□□ -0.57
PDCD4-201ENST00000280154 EXOC5O00471 708 aa11.5□□□□□ -0.57
PDCD4-201ENST00000280154 USP5P45974 858 aa11.5□□□□□ -0.57
PDCD4-201ENST00000280154 DDB1Q16531 1140 aa11.5□□□□□ -0.57
PDCD4-201ENST00000280154 FAM161AQ3B820 660 aa11.5□□□□□ -0.57
PDCD4-201ENST00000280154 LONRF3Q496Y0 759 aa11.5□□□□□ -0.57
PDCD4-201ENST00000280154 NBPF5PQ86XG9 351 aaPredicted RBP11.5□□□□□ -0.57
PDCD4-201ENST00000280154 TAF3Q5VWG9 929 aa11.5□□□□□ -0.57
PDCD4-201ENST00000280154 ARL10Q8N8L6 244 aa11.5□□□□□ -0.57
PDCD4-201ENST00000280154 PARNO95453 639 aaKnown RBP11.49□□□□□ -0.57
PDCD4-201ENST00000280154 KCNA1Q09470 495 aa11.49□□□□□ -0.57
PDCD4-201ENST00000280154 DDX46Q7L014 1031 aaKnown RBP11.49□□□□□ -0.57
PDCD4-201ENST00000280154 LRP5O75197 1615 aa11.49□□□□□ -0.57
PDCD4-201ENST00000280154 VAMP4O75379 141 aa11.49□□□□□ -0.57
PDCD4-201ENST00000280154 STRN4Q9NRL3 753 aa11.49□□□□□ -0.57
PDCD4-201ENST00000280154 CCT2P78371 535 aaKnown RBP11.48□□□□□ -0.57
PDCD4-201ENST00000280154 SEPT12Q8IYM1 358 aa11.48□□□□□ -0.57
PDCD4-201ENST00000280154 LTV1Q96GA3 475 aaPredicted RBP11.48□□□□□ -0.57
PDCD4-201ENST00000280154 HDAC1Q13547 482 aaPredicted RBP11.48□□□□□ -0.57
PDCD4-201ENST00000280154 E2F5Q15329 346 aa11.48□□□□□ -0.57
PDCD4-201ENST00000280154 RIC1Q4ADV7 1423 aa11.48□□□□□ -0.57
PDCD4-201ENST00000280154 C1orf141Q5JVX7 400 aa11.48□□□□□ -0.57
PDCD4-201ENST00000280154 ARHGAP45Q92619 1136 aa11.48□□□□□ -0.57
PDCD4-201ENST00000280154 IQSEC3Q9UPP2 1182 aaPredicted RBP11.48□□□□□ -0.57
PDCD4-201ENST00000280154 ATG3Q9NT62 314 aa11.48□□□□□ -0.57
PDCD4-201ENST00000280154 PLSCR1O15162 318 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms