RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 A1CFQ9NQ94 594 aaKnown RBP9.02□□□□□ -0.96
GPNMB-201ENST00000258733 ANKIB1Q9P2G1 1089 aa9.02□□□□□ -0.96
GPNMB-201ENST00000258733 RTN2O75298 545 aa9.02□□□□□ -0.97
GPNMB-201ENST00000258733 TGFB3P10600 412 aa9.02□□□□□ -0.97
GPNMB-201ENST00000258733 SFSWAPQ12872 951 aaKnown RBP9.02□□□□□ -0.97
GPNMB-201ENST00000258733 BHMTQ93088 406 aa9.02□□□□□ -0.97
GPNMB-201ENST00000258733 RBSNQ9H1K0 784 aa9.02□□□□□ -0.97
GPNMB-201ENST00000258733 PRIM1P49642 420 aaKnown RBP9.02□□□□□ -0.97
GPNMB-201ENST00000258733 CORO7P57737 925 aa9.02□□□□□ -0.97
GPNMB-201ENST00000258733 DEUP1Q05D60 604 aa9.02□□□□□ -0.97
GPNMB-201ENST00000258733 MPP3Q13368 585 aa9.02□□□□□ -0.97
GPNMB-201ENST00000258733 KMT5BQ4FZB7 885 aa9.02□□□□□ -0.97
GPNMB-201ENST00000258733 C20orf194Q5TEA3 1177 aa9.02□□□□□ -0.97
GPNMB-201ENST00000258733 ANKRD45Q5TZF3 282 aa9.02□□□□□ -0.97
GPNMB-201ENST00000258733 FBXW7Q969H0 707 aa9.02□□□□□ -0.97
GPNMB-201ENST00000258733 ZBTB10Q96DT7 871 aa9.02□□□□□ -0.97
GPNMB-201ENST00000258733 MTRQ99707 1265 aa9.02□□□□□ -0.97
GPNMB-201ENST00000258733 MMADHCQ9H3L0 296 aaPredicted RBP9.02□□□□□ -0.97
GPNMB-201ENST00000258733 KIF9Q9HAQ2 790 aa9.02□□□□□ -0.97
GPNMB-201ENST00000258733 COG6Q9Y2V7 657 aa9.02□□□□□ -0.97
GPNMB-201ENST00000258733 KDM6BO15054 1643 aa9.02□□□□□ -0.97
GPNMB-201ENST00000258733 RANBP1P43487 201 aa9.01□□□□□ -0.97
GPNMB-201ENST00000258733 TPM4P67936 248 aa9.01□□□□□ -0.97
GPNMB-201ENST00000258733 LMOD2Q6P5Q4 547 aa9.01□□□□□ -0.97
GPNMB-201ENST00000258733 C11orf96Q7Z7L8 435 aa9.01□□□□□ -0.97
GPNMB-201ENST00000258733 SPRYD3Q8NCJ5 442 aa9.01□□□□□ -0.97
GPNMB-201ENST00000258733 IVLP07476 585 aa9.01□□□□□ -0.97
GPNMB-201ENST00000258733 CDR1P51861 262 aa9.01□□□□□ -0.97
GPNMB-201ENST00000258733 CCDC80Q76M96 950 aa9.01□□□□□ -0.97
GPNMB-201ENST00000258733 MYO1HQ8N1T3 1032 aa9.01□□□□□ -0.97
GPNMB-201ENST00000258733 TRPV5Q9NQA5 729 aa9.01□□□□□ -0.97
GPNMB-201ENST00000258733 JADE2Q9NQC1 790 aa9.01□□□□□ -0.97
GPNMB-201ENST00000258733 KIAA1107Q9UPP5 1409 aa9□□□□□ -0.97
GPNMB-201ENST00000258733 BOLA2-SMG1P6H3BVE0 249 aa9□□□□□ -0.97
GPNMB-201ENST00000258733 RLBP1P12271 317 aa9□□□□□ -0.97
GPNMB-201ENST00000258733 PPP4CP60510 307 aa9□□□□□ -0.97
GPNMB-201ENST00000258733 NSUN2Q08J23 767 aaKnown RBP eCLIP9□□□□□ -0.97
GPNMB-201ENST00000258733 IQCB1Q15051 598 aa9□□□□□ -0.97
GPNMB-201ENST00000258733 CPLX2Q6PUV4 134 aaKnown RBP9□□□□□ -0.97
GPNMB-201ENST00000258733 CATIPQ7Z7H3 387 aa9□□□□□ -0.97
GPNMB-201ENST00000258733 PMFBP1Q8TBY8 1022 aa9□□□□□ -0.97
GPNMB-201ENST00000258733 SMARCE1Q969G3 411 aa9□□□□□ -0.97
GPNMB-201ENST00000258733 SCLT1Q96NL6 688 aa9□□□□□ -0.97
GPNMB-201ENST00000258733 MCM8Q9UJA3 840 aa9□□□□□ -0.97
GPNMB-201ENST00000258733 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9□□□□□ -0.97
GPNMB-201ENST00000258733 H7C1W4 665 aa9□□□□□ -0.97
GPNMB-201ENST00000258733 RTN3O95197 1032 aaPredicted RBP9□□□□□ -0.97
GPNMB-201ENST00000258733 TMED1Q13445 227 aa9□□□□□ -0.97
GPNMB-201ENST00000258733 LAMB3Q13751 1172 aa9□□□□□ -0.97
GPNMB-201ENST00000258733 RRP12Q5JTH9 1297 aaKnown RBP9□□□□□ -0.97
GPNMB-201ENST00000258733 GJC2Q5T442 439 aaPredicted RBP9□□□□□ -0.97
GPNMB-201ENST00000258733 FAAH2Q6GMR7 532 aa9□□□□□ -0.97
GPNMB-201ENST00000258733 CHMP7Q8WUX9 453 aaPredicted RBP9□□□□□ -0.97
GPNMB-201ENST00000258733 CENPOQ9BU64 300 aa9□□□□□ -0.97
GPNMB-201ENST00000258733 TSGA10Q9BZW7 698 aa9□□□□□ -0.97
GPNMB-201ENST00000258733 UBAP1Q9NZ09 502 aa9□□□□□ -0.97
GPNMB-201ENST00000258733 E2F6O75461 281 aa8.99□□□□□ -0.97
GPNMB-201ENST00000258733 NF2P35240 595 aa8.99□□□□□ -0.97
GPNMB-201ENST00000258733 CCDC73Q6ZRK6 1079 aa8.99□□□□□ -0.97
GPNMB-201ENST00000258733 OTUD6AQ7L8S5 288 aa8.99□□□□□ -0.97
GPNMB-201ENST00000258733 WDR63Q8IWG1 891 aa8.99□□□□□ -0.97
GPNMB-201ENST00000258733 VPS37AQ8NEZ2 397 aa8.99□□□□□ -0.97
GPNMB-201ENST00000258733 B4GALNT2Q8NHY0 566 aa8.99□□□□□ -0.97
GPNMB-201ENST00000258733 GPCPD1Q9NPB8 672 aa8.99□□□□□ -0.97
GPNMB-201ENST00000258733 V9GYY5 206 aaPredicted RBP8.99□□□□□ -0.97
GPNMB-201ENST00000258733 CGNL1Q0VF96 1302 aa8.99□□□□□ -0.97
GPNMB-201ENST00000258733 CUL7Q14999 1698 aa8.99□□□□□ -0.97
GPNMB-201ENST00000258733 AQRO60306 1485 aaKnown RBP eCLIP8.99□□□□□ -0.97
GPNMB-201ENST00000258733 BRD4O60885 1362 aaPredicted RBP8.99□□□□□ -0.97
GPNMB-201ENST00000258733 LRRC10BA6NIK2 292 aa8.99□□□□□ -0.97
GPNMB-201ENST00000258733 EIF4BP23588 611 aaKnown RBP8.99□□□□□ -0.97
GPNMB-201ENST00000258733 KLHL40Q2TBA0 621 aa8.99□□□□□ -0.97
GPNMB-201ENST00000258733 ENOX1Q8TC92 643 aaKnown RBP8.99□□□□□ -0.97
GPNMB-201ENST00000258733 JPH2Q9BR39 696 aaPredicted RBP8.99□□□□□ -0.97
GPNMB-201ENST00000258733 BARX2Q9UMQ3 279 aaPredicted RBP8.99□□□□□ -0.97
GPNMB-201ENST00000258733 ATP8A1Q9Y2Q0 1164 aa8.99□□□□□ -0.97
GPNMB-201ENST00000258733 EFCAB5A4FU69 1503 aa8.99□□□□□ -0.97
GPNMB-201ENST00000258733 TRIM64CA6NLI5 447 aa8.98□□□□□ -0.97
GPNMB-201ENST00000258733 ATP6V1G1O75348 118 aa8.98□□□□□ -0.97
GPNMB-201ENST00000258733 GTF3C6Q969F1 213 aa8.98□□□□□ -0.97
GPNMB-201ENST00000258733 SLC7A5P2Q9GIP4 190 aa8.98□□□□□ -0.97
GPNMB-201ENST00000258733 GABBR1Q9UBS5 961 aa8.98□□□□□ -0.97
GPNMB-201ENST00000258733 MAPK8IP1Q9UQF2 711 aa8.98□□□□□ -0.97
GPNMB-201ENST00000258733 CTTNBP2Q8WZ74 1663 aa8.98□□□□□ -0.97
GPNMB-201ENST00000258733 ZNF189O75820 626 aaPredicted RBP8.98□□□□□ -0.97
GPNMB-201ENST00000258733 ST5P78524 1137 aa8.98□□□□□ -0.97
GPNMB-201ENST00000258733 TBC1D10BQ4KMP7 808 aaPredicted RBP8.98□□□□□ -0.97
GPNMB-201ENST00000258733 TADA2BQ86TJ2 420 aa8.98□□□□□ -0.97
GPNMB-201ENST00000258733 CCDC65Q8IXS2 484 aa8.98□□□□□ -0.97
GPNMB-201ENST00000258733 C17orf53Q8N3J3 647 aaPredicted RBP8.98□□□□□ -0.97
GPNMB-201ENST00000258733 MRS2Q9HD23 443 aa8.98□□□□□ -0.97
GPNMB-201ENST00000258733 GINM1Q9NU53 330 aa8.98□□□□□ -0.97
GPNMB-201ENST00000258733 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.98□□□□□ -0.97
GPNMB-201ENST00000258733 MRPL12P52815 198 aaKnown RBP8.98□□□□□ -0.97
GPNMB-201ENST00000258733 FAM114A1Q8IWE2 563 aa8.98□□□□□ -0.97
GPNMB-201ENST00000258733 SLC43A3Q8NBI5 491 aa8.98□□□□□ -0.97
GPNMB-201ENST00000258733 MAP3K20Q9NYL2 800 aaKnown RBP8.98□□□□□ -0.97
GPNMB-201ENST00000258733 PTPRCP08575 1304 aa8.97□□□□□ -0.97
GPNMB-201ENST00000258733 MAPKBP1O60336 1514 aa8.97□□□□□ -0.97
GPNMB-201ENST00000258733 TOPBP1Q92547 1522 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms