RNA–Protein interactions for RNA: ENST00000236017.5

APH1A-201, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-201ENST00000236017 ARFGEF2Q9Y6D5 1785 aa23.67■■□□□ 1.38
APH1A-201ENST00000236017 MYBBP1AQ9BQG0 1328 aaKnown RBP23.66■■□□□ 1.38
APH1A-201ENST00000236017 ZNF541Q9H0D2 1346 aa23.66■■□□□ 1.38
APH1A-201ENST00000236017 FZD9O00144 591 aa23.66■■□□□ 1.38
APH1A-201ENST00000236017 NTSR2O95665 410 aa23.66■■□□□ 1.38
APH1A-201ENST00000236017 NLRP3Q96P20 1036 aa23.66■■□□□ 1.38
APH1A-201ENST00000236017 CREBZFQ9NS37 354 aa23.66■■□□□ 1.38
APH1A-201ENST00000236017 HACL1Q9UJ83 578 aa23.66■■□□□ 1.38
APH1A-201ENST00000236017 NEUROD2Q15784 382 aa23.65■■□□□ 1.38
APH1A-201ENST00000236017 LRP10Q7Z4F1 713 aa23.65■■□□□ 1.38
APH1A-201ENST00000236017 UTP14AQ9BVJ6 771 aaKnown RBP23.65■■□□□ 1.38
APH1A-201ENST00000236017 TMX4Q9H1E5 349 aaPredicted RBP23.64■■□□□ 1.37
APH1A-201ENST00000236017 RIC1Q4ADV7 1423 aa23.64■■□□□ 1.37
APH1A-201ENST00000236017 CACNA1SQ13698 1873 aa23.64■■□□□ 1.37
APH1A-201ENST00000236017 EIF6P56537 245 aaKnown RBP23.63■■□□□ 1.37
APH1A-201ENST00000236017 WDR43Q15061 677 aaKnown RBP eCLIP23.63■■□□□ 1.37
APH1A-201ENST00000236017 EAPPQ56P03 285 aaPredicted RBP23.63■■□□□ 1.37
APH1A-201ENST00000236017 HSP90AB3PQ58FF7 597 aa23.63■■□□□ 1.37
APH1A-201ENST00000236017 SLC10A5Q5PT55 438 aa23.63■■□□□ 1.37
APH1A-201ENST00000236017 GPC2Q8N158 579 aa23.63■■□□□ 1.37
APH1A-201ENST00000236017 CLEC11AQ9Y240 323 aa23.63■■□□□ 1.37
APH1A-201ENST00000236017 ANXA1P04083 346 aa23.62■■□□□ 1.37
APH1A-201ENST00000236017 EPHX2P34913 555 aa23.62■■□□□ 1.37
APH1A-201ENST00000236017 PROSER3Q2NL68 480 aa23.62■■□□□ 1.37
APH1A-201ENST00000236017 COPS6Q7L5N1 327 aa23.62■■□□□ 1.37
APH1A-201ENST00000236017 PNMA8AQ86V59 439 aaPredicted RBP23.62■■□□□ 1.37
APH1A-201ENST00000236017 CCDC146Q8IYE0 955 aa23.62■■□□□ 1.37
APH1A-201ENST00000236017 RUNDC1Q96C34 613 aa23.62■■□□□ 1.37
APH1A-201ENST00000236017 PPEF1O14829 653 aaPredicted RBP23.61■■□□□ 1.37
APH1A-201ENST00000236017 NECTIN2Q92692 538 aa23.61■■□□□ 1.37
APH1A-201ENST00000236017 CHL1O00533 1208 aa23.6■■□□□ 1.37
APH1A-201ENST00000236017 TCERG1O14776 1098 aaKnown RBP23.6■■□□□ 1.37
APH1A-201ENST00000236017 AIMP1Q12904 312 aaKnown RBP23.6■■□□□ 1.37
APH1A-201ENST00000236017 COL13A1Q5TAT6 717 aaPredicted RBP23.6■■□□□ 1.37
APH1A-201ENST00000236017 LARGE2Q8N3Y3 721 aa23.6■■□□□ 1.37
APH1A-201ENST00000236017 LAS1LQ9Y4W2 734 aaKnown RBP23.6■■□□□ 1.37
APH1A-201ENST00000236017 RNF123Q5XPI4 1314 aa23.59■■□□□ 1.37
APH1A-201ENST00000236017 NUP98P52948 1817 aa23.59■■□□□ 1.37
APH1A-201ENST00000236017 HSPA1AP0DMV8 641 aaKnown RBP23.59■■□□□ 1.37
APH1A-201ENST00000236017 HSPA1BP0DMV9 641 aaKnown RBP23.59■■□□□ 1.37
APH1A-201ENST00000236017 C3orf67Q6ZVT6 689 aa23.59■■□□□ 1.37
APH1A-201ENST00000236017 XAGE3Q8WTP9 111 aa23.59■■□□□ 1.37
APH1A-201ENST00000236017 DDX21Q9NR30 783 aaKnown RBP eCLIP23.59■■□□□ 1.37
APH1A-201ENST00000236017 SNED1Q8TER0 1413 aa23.59■■□□□ 1.37
APH1A-201ENST00000236017 PASKQ96RG2 1323 aa23.59■■□□□ 1.37
APH1A-201ENST00000236017 MKRN1Q9UHC7 482 aaKnown RBP23.58■■□□□ 1.37
APH1A-201ENST00000236017 GJA3Q9Y6H8 435 aa23.58■■□□□ 1.37
APH1A-201ENST00000236017 ITGBL1O95965 494 aaPredicted RBP23.57■■□□□ 1.36
APH1A-201ENST00000236017 TCIRG1Q13488 830 aa23.57■■□□□ 1.36
APH1A-201ENST00000236017 TRIM35Q9UPQ4 493 aa23.57■■□□□ 1.36
APH1A-201ENST00000236017 LMOD1P29536 600 aaPredicted RBP23.56■■□□□ 1.36
APH1A-201ENST00000236017 NLRP10Q86W26 655 aa23.56■■□□□ 1.36
APH1A-201ENST00000236017 VPS33BQ9H267 617 aa23.56■■□□□ 1.36
APH1A-201ENST00000236017 ADAMTS8Q9UP79 889 aa23.56■■□□□ 1.36
APH1A-201ENST00000236017 ATP6V0A2Q9Y487 856 aa23.56■■□□□ 1.36
APH1A-201ENST00000236017 SCN4AP35499 1836 aa23.55■■□□□ 1.36
APH1A-201ENST00000236017 TMEM88BA6NKF7 163 aa23.55■■□□□ 1.36
APH1A-201ENST00000236017 BBOX1O75936 387 aa23.55■■□□□ 1.36
APH1A-201ENST00000236017 NIM1KQ8IY84 436 aa23.55■■□□□ 1.36
APH1A-201ENST00000236017 TRMT112Q9UI30 125 aaKnown RBP23.55■■□□□ 1.36
APH1A-201ENST00000236017 KRT24Q2M2I5 525 aa23.54■■□□□ 1.36
APH1A-201ENST00000236017 CNTROBQ8N137 903 aa23.54■■□□□ 1.36
APH1A-201ENST00000236017 SUPT20HQ8NEM7 779 aa23.54■■□□□ 1.36
APH1A-201ENST00000236017 PPIP5K2O43314 1243 aa23.53■■□□□ 1.36
APH1A-201ENST00000236017 HOXB7P09629 217 aa23.53■■□□□ 1.36
APH1A-201ENST00000236017 HDGFL1Q5TGJ6 251 aa23.53■■□□□ 1.36
APH1A-201ENST00000236017 DDX46Q7L014 1031 aaKnown RBP23.53■■□□□ 1.36
APH1A-201ENST00000236017 ABCC4O15439 1325 aa23.53■■□□□ 1.36
APH1A-201ENST00000236017 SH3TC1Q8TE82 1336 aa23.53■■□□□ 1.36
APH1A-201ENST00000236017 HCLS1P14317 486 aaPredicted RBP23.52■■□□□ 1.36
APH1A-201ENST00000236017 MAP1SQ66K74 1059 aaPredicted RBP23.52■■□□□ 1.36
APH1A-201ENST00000236017 SP8Q8IXZ3 490 aa23.52■■□□□ 1.36
APH1A-201ENST00000236017 TNS4Q8IZW8 715 aa23.52■■□□□ 1.36
APH1A-201ENST00000236017 CHPF2Q9P2E5 772 aa23.52■■□□□ 1.36
APH1A-201ENST00000236017 CNTNAP1P78357 1384 aa23.52■■□□□ 1.36
APH1A-201ENST00000236017 PLBD2Q8NHP8 589 aa23.51■■□□□ 1.35
APH1A-201ENST00000236017 CFAP44Q96MT7 982 aa23.51■■□□□ 1.35
APH1A-201ENST00000236017 DBF4Q9UBU7 674 aaPredicted RBP23.51■■□□□ 1.35
APH1A-201ENST00000236017 DPP8Q6V1X1 898 aaPredicted RBP23.5■■□□□ 1.35
APH1A-201ENST00000236017 ANKRD13DQ6ZTN6 518 aa23.5■■□□□ 1.35
APH1A-201ENST00000236017 SLC51AQ86UW1 340 aa23.5■■□□□ 1.35
APH1A-201ENST00000236017 MPNDQ8N594 471 aa23.5■■□□□ 1.35
APH1A-201ENST00000236017 RTFDC1Q9BY42 306 aaPredicted RBP23.5■■□□□ 1.35
APH1A-201ENST00000236017 GRAPQ13588 217 aa23.49■■□□□ 1.35
APH1A-201ENST00000236017 AOC3Q16853 763 aa23.49■■□□□ 1.35
APH1A-201ENST00000236017 GRAPLQ8TC17 118 aaPredicted RBP23.49■■□□□ 1.35
APH1A-201ENST00000236017 EPS15P42566 896 aa23.48■■□□□ 1.35
APH1A-201ENST00000236017 SCNN1DP51172 638 aa23.48■■□□□ 1.35
APH1A-201ENST00000236017 PRKRIP1Q9H875 184 aaPredicted RBP23.48■■□□□ 1.35
APH1A-201ENST00000236017 HYPKQ9NX55 129 aa23.48■■□□□ 1.35
APH1A-201ENST00000236017 ZNRF3Q9ULT6 936 aa23.48■■□□□ 1.35
APH1A-201ENST00000236017 DUSP27Q5VZP5 1158 aa23.47■■□□□ 1.35
APH1A-201ENST00000236017 USP50Q70EL3 339 aaPredicted RBP23.47■■□□□ 1.35
APH1A-201ENST00000236017 TMC4Q7Z404 712 aa23.47■■□□□ 1.35
APH1A-201ENST00000236017 COL4A5P29400 1685 aa23.46■■□□□ 1.35
APH1A-201ENST00000236017 VEGFBP49765 207 aa23.46■■□□□ 1.35
APH1A-201ENST00000236017 DEFB115Q30KQ5 88 aa23.46■■□□□ 1.35
APH1A-201ENST00000236017 ISCA1Q9BUE6 129 aa23.45■■□□□ 1.34
APH1A-201ENST00000236017 CALD1Q05682 793 aaKnown RBP23.44■■□□□ 1.34
APH1A-201ENST00000236017 CXCL9Q07325 125 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms