RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Nlrp1aQ2LKU9 1182 aa12.23□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 RubcnlQ3TD16 648 aa12.23□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Jarid2Q62315 1234 aa12.23□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Unc93aQ710D3 458 aa12.23□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Dis3l2Q8CI75 870 aaKnown RBP12.23□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Rbm8aQ9CWZ3 174 aa12.23□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Ehd4Q9EQP2 541 aa12.23□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Syt1P46096 421 aa12.23□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Kif20aP97329 887 aa12.23□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Sp8Q8BMJ8 486 aa12.23□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 AbraQ8BUZ1 375 aa12.23□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Ltb4r2Q9JJL9 360 aa12.23□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Ppp4r3aQ6P2K6 820 aa12.22□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 PogkQ80TC5 607 aa12.22□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Dhx38Q80X98 1228 aa12.22□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Mylk2Q8VCR8 613 aa12.22□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Cdca7lQ922M5 438 aa12.22□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Zfp804bA0A0G2JGH6 1343 aa12.22□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Sos2Q02384 1333 aa12.22□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Mybbp1aQ7TPV4 1344 aaKnown RBP12.22□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Tnrc6cQ3UHC0 1690 aaKnown RBP12.22□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Prl3d3A0A0M6L0J6 224 aa12.21□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Gadd45bP22339 160 aa12.21□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Mdm2P23804 489 aa12.21□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Cers3Q1A3B0 383 aa12.21□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Atg9aQ68FE2 551 aa12.21□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Cchcr1Q8K2I2 770 aa12.21□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Pof1bQ8K4L4 587 aa12.21□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Bmp2kQ91Z96 1138 aa12.21□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Acsbg1Q99PU5 721 aa12.21□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Cwc25Q9DBF7 416 aa12.21□□□□□ -0.45
Cpsf3-211ENSMUST00000222968 Ugt1a5B2RT14 529 aa12.21□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Sult6b1P0CC03 303 aa12.21□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Cpa2Q504N0 417 aa12.21□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Fam102bQ8BQS4 339 aa12.21□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Q8C5K5 320 aa12.21□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Tmc2Q8R4P4 888 aa12.21□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 NfkbibQ60778 359 aa12.2□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 StrbpQ91WM1 672 aaKnown RBP12.2□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 4931400O07RikQ9D4M5 137 aa12.2□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Q9D9S1 216 aa12.2□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Nav1Q8CH77 1875 aa12.19□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Rbbp8nlA2ABX0 614 aa12.19□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Prl3d2F6R3P9 224 aa12.19□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Pkp1P97350 728 aaKnown RBP12.19□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 ZyxQ62523 564 aa12.19□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Gripap1Q8VD04 806 aa12.19□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Glipr1l2Q9CQ35 332 aa12.19□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Stard3nlQ9DCI3 235 aa12.19□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 LratQ9JI60 231 aa12.19□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Casz1Q9CWL2 1761 aa12.19□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Arap2Q8BZ05 1703 aa12.19□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Kcnh4A2A5F7 1018 aa12.19□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Neurod6P48986 337 aa12.19□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Gm12185Q5NCB2 835 aa12.19□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Atf7Q8R0S1 413 aa12.19□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Ccar2Q8VDP4 922 aaKnown RBP12.19□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Mrpl50Q8VDT9 159 aaKnown RBP12.19□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Fbxl16A2RT62 479 aa12.18□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 PrkcshO08795 521 aa12.18□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Myd88P22366 296 aa12.18□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Smim5Q8BT42 78 aa12.18□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Cap2Q9CYT6 476 aa12.18□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Eef2kO08796 724 aa12.17□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 SlkO54988 1233 aa12.17□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 F2rP30558 430 aa12.17□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Wdr93Q402B2 695 aa12.17□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Rbm27Q5SFM8 1060 aaKnown RBP12.17□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Vps54Q5SPW0 977 aa12.17□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Nek11Q8C0Q4 628 aa12.17□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Polr3dQ91WD1 398 aa12.17□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Fam213aQ9CYH2 218 aa12.17□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 PhaxQ9JJT9 385 aaKnown RBP12.17□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Stx6Q9JKK1 255 aa12.17□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Hmg20bQ9Z104 317 aa12.17□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 AppP12023 770 aa12.17□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Bms1Q6PGF5 1284 aaKnown RBP12.17□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 DpydQ8CHR6 1025 aa12.17□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Ciao1Q99KN2 339 aa12.17□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Smc3Q9CW03 1217 aaKnown RBP12.17□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Psma5Q9Z2U1 241 aaKnown RBP12.17□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Greb1lB9EJV3 1913 aa12.16□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 AU015836B2RUM3 263 aa12.16□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Eya2O08575 532 aa12.16□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 MecomP14404 1042 aa12.16□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Ccnl1Q52KE7 532 aaKnown RBP12.16□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Rnf20Q5DTM8 973 aa12.16□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Clcn1Q64347 994 aa12.16□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Rps6kb1Q8BSK8 525 aa12.16□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Lrp6O88572 1613 aa12.15□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Mb21d2Q8C525 428 aa12.15□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Gigyf1Q99MR1 1044 aaKnown RBP12.15□□□□□ -0.46
Cpsf3-211ENSMUST00000222968 Vsig10D3YX43 558 aa12.14□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Usp44Q8C2S0 711 aa12.14□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Smc4Q8CG47 1286 aa12.14□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Rrs1Q9CYH6 365 aaKnown RBP12.14□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Cyp2d10P24456 504 aa12.14□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Timm10P62073 90 aa12.14□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Kndc1Q0KK55 1742 aa12.14□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 NpeppsQ11011 920 aa12.14□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms