RNA–Protein interactions for RNA: ENSMUST00000173347.7

Lig3-210, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-210ENSMUST00000173347 Zbtb45Q52KG4 520 aa13.12□□□□□ -0.31
Lig3-210ENSMUST00000173347 Ddx11Q6AXC6 880 aa13.12□□□□□ -0.31
Lig3-210ENSMUST00000173347 Il1rapl2Q9ERS6 686 aa13.12□□□□□ -0.31
Lig3-210ENSMUST00000173347 LratQ9JI60 231 aa13.12□□□□□ -0.31
Lig3-210ENSMUST00000173347 DaxxO35613 739 aa13.12□□□□□ -0.31
Lig3-210ENSMUST00000173347 AnlnQ8K298 1121 aaKnown RBP13.12□□□□□ -0.31
Lig3-210ENSMUST00000173347 Top1mtQ8R4U6 593 aa13.12□□□□□ -0.31
Lig3-210ENSMUST00000173347 Rrs1Q9CYH6 365 aaKnown RBP13.12□□□□□ -0.31
Lig3-210ENSMUST00000173347 Pmfbp1Q9WVQ0 1022 aa13.12□□□□□ -0.31
Lig3-210ENSMUST00000173347 InhbeO08717 350 aa13.11□□□□□ -0.31
Lig3-210ENSMUST00000173347 Hsp90aa1P07901 733 aaKnown RBP13.11□□□□□ -0.31
Lig3-210ENSMUST00000173347 DbnlQ62418 436 aa13.11□□□□□ -0.31
Lig3-210ENSMUST00000173347 Prr29B1ARI9 187 aa13.11□□□□□ -0.31
Lig3-210ENSMUST00000173347 LlphQ9D945 130 aaKnown RBP13.11□□□□□ -0.31
Lig3-210ENSMUST00000173347 Rad50P70388 1312 aa13.11□□□□□ -0.31
Lig3-210ENSMUST00000173347 Casq1O09165 405 aa13.11□□□□□ -0.31
Lig3-210ENSMUST00000173347 GptQ8QZR5 496 aa13.11□□□□□ -0.31
Lig3-210ENSMUST00000173347 Sipa1l3G3X9J0 1776 aa13.1□□□□□ -0.31
Lig3-210ENSMUST00000173347 Eya2O08575 532 aa13.1□□□□□ -0.31
Lig3-210ENSMUST00000173347 BcanQ61361 883 aa13.1□□□□□ -0.31
Lig3-210ENSMUST00000173347 Clca2Q8BG22 942 aa13.1□□□□□ -0.31
Lig3-210ENSMUST00000173347 Tmc2Q8R4P4 888 aa13.1□□□□□ -0.31
Lig3-210ENSMUST00000173347 Rtn4Q99P72 1162 aaKnown RBP13.1□□□□□ -0.31
Lig3-210ENSMUST00000173347 AtrnQ9WU60 1428 aa13.1□□□□□ -0.31
Lig3-210ENSMUST00000173347 Igflr1Q3U4N7 345 aa13.1□□□□□ -0.31
Lig3-210ENSMUST00000173347 NfkbibQ60778 359 aa13.1□□□□□ -0.31
Lig3-210ENSMUST00000173347 Nsfl1cQ9CZ44 370 aaKnown RBP13.1□□□□□ -0.31
Lig3-210ENSMUST00000173347 Cyp27a1Q9DBG1 533 aa13.1□□□□□ -0.31
Lig3-210ENSMUST00000173347 Prr5lA2AVJ5 370 aa13.09□□□□□ -0.31
Lig3-210ENSMUST00000173347 Gsdma2Q32M21 443 aa13.09□□□□□ -0.31
Lig3-210ENSMUST00000173347 Miga2Q8BK03 593 aa13.09□□□□□ -0.31
Lig3-210ENSMUST00000173347 Tshz3Q8CGV9 1081 aa13.09□□□□□ -0.31
Lig3-210ENSMUST00000173347 Plcb3P51432 1234 aaKnown RBP13.09□□□□□ -0.31
Lig3-210ENSMUST00000173347 Kndc1Q0KK55 1742 aa13.09□□□□□ -0.31
Lig3-210ENSMUST00000173347 Tnrc6cQ3UHC0 1690 aaKnown RBP13.09□□□□□ -0.31
Lig3-210ENSMUST00000173347 Bsdc1Q80Y55 427 aa13.09□□□□□ -0.31
Lig3-210ENSMUST00000173347 Rps6ka4Q9Z2B9 773 aa13.09□□□□□ -0.31
Lig3-210ENSMUST00000173347 Smarce1O54941 411 aaKnown RBP13.08□□□□□ -0.31
Lig3-210ENSMUST00000173347 Cyp19a1P28649 503 aa13.08□□□□□ -0.31
Lig3-210ENSMUST00000173347 Atg9aQ68FE2 551 aa13.08□□□□□ -0.31
Lig3-210ENSMUST00000173347 Phactr2B1AVP0 632 aa13.08□□□□□ -0.32
Lig3-210ENSMUST00000173347 MecomP14404 1042 aa13.08□□□□□ -0.32
Lig3-210ENSMUST00000173347 Fkbp1aP26883 108 aaKnown RBP13.08□□□□□ -0.32
Lig3-210ENSMUST00000173347 Slf2Q6P9P0 1278 aa13.08□□□□□ -0.32
Lig3-210ENSMUST00000173347 Ciao1Q99KN2 339 aa13.08□□□□□ -0.32
Lig3-210ENSMUST00000173347 Rbbp8nlA2ABX0 614 aa13.08□□□□□ -0.32
Lig3-210ENSMUST00000173347 Cops6O88545 324 aa13.08□□□□□ -0.32
Lig3-210ENSMUST00000173347 Trim34aQ99PP6 485 aa13.08□□□□□ -0.32
Lig3-210ENSMUST00000173347 Mlh1Q9JK91 760 aa13.08□□□□□ -0.32
Lig3-210ENSMUST00000173347 Mctp2Q5RJH2 878 aa13.07□□□□□ -0.32
Lig3-210ENSMUST00000173347 Esco1Q69Z69 843 aa13.07□□□□□ -0.32
Lig3-210ENSMUST00000173347 Ssc5dQ8BV57 1371 aa13.07□□□□□ -0.32
Lig3-210ENSMUST00000173347 Kdm3aQ6PCM1 1323 aa13.07□□□□□ -0.32
Lig3-210ENSMUST00000173347 Ms4a2P20490 235 aa13.07□□□□□ -0.32
Lig3-210ENSMUST00000173347 Strn4P58404 760 aa13.07□□□□□ -0.32
Lig3-210ENSMUST00000173347 Arap2Q8BZ05 1703 aa13.07□□□□□ -0.32
Lig3-210ENSMUST00000173347 Ric1Q69ZJ7 1422 aa13.06□□□□□ -0.32
Lig3-210ENSMUST00000173347 Bicdl1A0JNT9 577 aa13.06□□□□□ -0.32
Lig3-210ENSMUST00000173347 Trim34bJ3QNR8 485 aa13.06□□□□□ -0.32
Lig3-210ENSMUST00000173347 Atp6v1dP57746 247 aa13.06□□□□□ -0.32
Lig3-210ENSMUST00000173347 PhaxQ9JJT9 385 aaKnown RBP13.06□□□□□ -0.32
Lig3-210ENSMUST00000173347 Fam102bQ8BQS4 339 aa13.06□□□□□ -0.32
Lig3-210ENSMUST00000173347 Timm10P62073 90 aa13.06□□□□□ -0.32
Lig3-210ENSMUST00000173347 Zbtb38Q3LR78 1197 aa13.06□□□□□ -0.32
Lig3-210ENSMUST00000173347 Filip1lQ6P6L0 1131 aa13.06□□□□□ -0.32
Lig3-210ENSMUST00000173347 Tmem266Q8BZB3 538 aa13.06□□□□□ -0.32
Lig3-210ENSMUST00000173347 KinQ8K339 391 aa13.06□□□□□ -0.32
Lig3-210ENSMUST00000173347 Ifit2Q64112 472 aa13.05□□□□□ -0.32
Lig3-210ENSMUST00000173347 Sgsm1Q8BPQ7 1093 aa13.05□□□□□ -0.32
Lig3-210ENSMUST00000173347 Vps54Q5SPW0 977 aa13.05□□□□□ -0.32
Lig3-210ENSMUST00000173347 Cyp7a1Q64505 503 aa13.05□□□□□ -0.32
Lig3-210ENSMUST00000173347 Sema6bO54951 886 aa13.05□□□□□ -0.32
Lig3-210ENSMUST00000173347 Ints3Q7TPD0 1041 aaKnown RBP13.05□□□□□ -0.32
Lig3-210ENSMUST00000173347 Zkscan1Q8BGS3 561 aaKnown RBP13.05□□□□□ -0.32
Lig3-210ENSMUST00000173347 Mdm2P23804 489 aa13.04□□□□□ -0.32
Lig3-210ENSMUST00000173347 EvcP57680 1005 aa13.04□□□□□ -0.32
Lig3-210ENSMUST00000173347 MypopQ8R4U1 393 aa13.04□□□□□ -0.32
Lig3-210ENSMUST00000173347 Krt25Q8VCW2 446 aa13.04□□□□□ -0.32
Lig3-210ENSMUST00000173347 Ftl2P49945 183 aa13.04□□□□□ -0.32
Lig3-210ENSMUST00000173347 Smarcc1P97496 1104 aa13.04□□□□□ -0.32
Lig3-210ENSMUST00000173347 Atp8a2P98200 1148 aa13.03□□□□□ -0.32
Lig3-210ENSMUST00000173347 Ifit1bl2Q3U687 466 aa13.03□□□□□ -0.32
Lig3-210ENSMUST00000173347 Ncoa5Q91W39 579 aaKnown RBP13.03□□□□□ -0.32
Lig3-210ENSMUST00000173347 Ddx46Q569Z5 1032 aaKnown RBP13.03□□□□□ -0.32
Lig3-210ENSMUST00000173347 Antxr1Q9CZ52 562 aa13.03□□□□□ -0.32
Lig3-210ENSMUST00000173347 NgdnQ9DB96 315 aaKnown RBP13.03□□□□□ -0.32
Lig3-210ENSMUST00000173347 Foxo4Q9WVH3 505 aa13.03□□□□□ -0.32
Lig3-210ENSMUST00000173347 Pdzrn3Q69ZS0 1063 aa13.03□□□□□ -0.32
Lig3-210ENSMUST00000173347 Q8BT18 775 aa13.03□□□□□ -0.32
Lig3-210ENSMUST00000173347 Plcd4Q8K3R3 807 aa13.03□□□□□ -0.32
Lig3-210ENSMUST00000173347 Nyap1Q6PFX7 833 aa13.02□□□□□ -0.32
Lig3-210ENSMUST00000173347 Asap2Q7SIG6 958 aa13.02□□□□□ -0.32
Lig3-210ENSMUST00000173347 Slfnl1Q8BHW9 410 aa13.02□□□□□ -0.32
Lig3-210ENSMUST00000173347 Myh1Q5SX40 1942 aa13.02□□□□□ -0.32
Lig3-210ENSMUST00000173347 Rbm8a2A0A0N4SUH6 174 aa13.02□□□□□ -0.33
Lig3-210ENSMUST00000173347 Gjb2Q00977 226 aa13.02□□□□□ -0.33
Lig3-210ENSMUST00000173347 Rnf20Q5DTM8 973 aa13.02□□□□□ -0.33
Lig3-210ENSMUST00000173347 Rbm8aQ9CWZ3 174 aa13.02□□□□□ -0.33
Lig3-210ENSMUST00000173347 PtmsQ9D0J8 101 aaKnown RBP13.02□□□□□ -0.33
Lig3-210ENSMUST00000173347 Slx4ipQ9D7Y9 413 aa13.02□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 69.5 ms