RNA–Protein interactions for RNA: ENSMUST00000165443.2

Nup50-201, Transcript of Nuclear pore complex protein Nup50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup50, Length 4,741 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup50-201ENSMUST00000165443 Lrrc9Q8CDN9 1456 aa12.21□□□□□ -0.45
Nup50-201ENSMUST00000165443 Speer4dL7N216 212 aa12.21□□□□□ -0.45
Nup50-201ENSMUST00000165443 Vps18Q8R307 973 aa12.21□□□□□ -0.45
Nup50-201ENSMUST00000165443 Cwc25Q9DBF7 416 aa12.21□□□□□ -0.45
Nup50-201ENSMUST00000165443 Izumo3A6PWV3 263 aa12.21□□□□□ -0.46
Nup50-201ENSMUST00000165443 Bbof1Q3V079 533 aa12.21□□□□□ -0.46
Nup50-201ENSMUST00000165443 Smc1aQ9CU62 1233 aaKnown RBP12.21□□□□□ -0.46
Nup50-201ENSMUST00000165443 Fam208aQ69ZR9 1610 aaKnown RBP12.2□□□□□ -0.46
Nup50-201ENSMUST00000165443 Spg7Q3ULF4 781 aa12.2□□□□□ -0.46
Nup50-201ENSMUST00000165443 Gm21985Q6P6P5 1106 aa12.2□□□□□ -0.46
Nup50-201ENSMUST00000165443 Rai14Q9EP71 979 aaKnown RBP12.2□□□□□ -0.46
Nup50-201ENSMUST00000165443 Tbc1d8bA3KGB4 1114 aa12.2□□□□□ -0.46
Nup50-201ENSMUST00000165443 SfswapQ3USH5 945 aaKnown RBP12.2□□□□□ -0.46
Nup50-201ENSMUST00000165443 Tbc1d7Q9D0K0 293 aa12.2□□□□□ -0.46
Nup50-201ENSMUST00000165443 Rbm8a2A0A0N4SUH6 174 aa12.2□□□□□ -0.46
Nup50-201ENSMUST00000165443 Mcmdc2E9Q956 681 aa12.2□□□□□ -0.46
Nup50-201ENSMUST00000165443 Ccdc12Q8R344 166 aaKnown RBP12.2□□□□□ -0.46
Nup50-201ENSMUST00000165443 Rbm8aQ9CWZ3 174 aa12.2□□□□□ -0.46
Nup50-201ENSMUST00000165443 Plekho1Q9JIY0 408 aa12.2□□□□□ -0.46
Nup50-201ENSMUST00000165443 SphkapQ6NSW3 1687 aa12.19□□□□□ -0.46
Nup50-201ENSMUST00000165443 Cyb5rlB1AS42 316 aa12.19□□□□□ -0.46
Nup50-201ENSMUST00000165443 Slx4ipQ9D7Y9 413 aa12.19□□□□□ -0.46
Nup50-201ENSMUST00000165443 Tubb5P99024 444 aaKnown RBP12.19□□□□□ -0.46
Nup50-201ENSMUST00000165443 Snx13Q6PHS6 957 aa12.19□□□□□ -0.46
Nup50-201ENSMUST00000165443 Fam160b2Q80YR2 744 aa12.19□□□□□ -0.46
Nup50-201ENSMUST00000165443 Klf15Q9EPW2 415 aa12.19□□□□□ -0.46
Nup50-201ENSMUST00000165443 Zscan29E9Q5B4 869 aa12.19□□□□□ -0.46
Nup50-201ENSMUST00000165443 Zap70P43404 618 aa12.19□□□□□ -0.46
Nup50-201ENSMUST00000165443 Wdhd1P59328 1117 aa12.19□□□□□ -0.46
Nup50-201ENSMUST00000165443 Ctr9Q62018 1173 aaKnown RBP12.19□□□□□ -0.46
Nup50-201ENSMUST00000165443 Ppp1r10Q80W00 888 aaKnown RBP12.19□□□□□ -0.46
Nup50-201ENSMUST00000165443 Gtf3c5Q8R2T8 520 aa12.19□□□□□ -0.46
Nup50-201ENSMUST00000165443 Rnf17Q99MV7 1640 aa12.19□□□□□ -0.46
Nup50-201ENSMUST00000165443 Ccdc121E9Q6D3 323 aa12.19□□□□□ -0.46
Nup50-201ENSMUST00000165443 Cetn1P41209 172 aa12.19□□□□□ -0.46
Nup50-201ENSMUST00000165443 Zmym3Q9JLM4 1370 aa12.19□□□□□ -0.46
Nup50-201ENSMUST00000165443 Podxl2Q8CAE9 603 aa12.18□□□□□ -0.46
Nup50-201ENSMUST00000165443 Rbbp8nlA2ABX0 614 aa12.18□□□□□ -0.46
Nup50-201ENSMUST00000165443 Fbln2P37889 1221 aa12.18□□□□□ -0.46
Nup50-201ENSMUST00000165443 U2af1l4Q8BGJ9 220 aa12.18□□□□□ -0.46
Nup50-201ENSMUST00000165443 Hs2st1Q8R3H7 356 aa12.18□□□□□ -0.46
Nup50-201ENSMUST00000165443 Cnnm2Q3TWN3 875 aa12.18□□□□□ -0.46
Nup50-201ENSMUST00000165443 Kmt5bQ3U8K7 883 aa12.18□□□□□ -0.46
Nup50-201ENSMUST00000165443 Ddx46Q569Z5 1032 aaKnown RBP12.18□□□□□ -0.46
Nup50-201ENSMUST00000165443 Ccdc122Q8BVN0 290 aa12.18□□□□□ -0.46
Nup50-201ENSMUST00000165443 Fam135bQ9DAI6 1403 aa12.17□□□□□ -0.46
Nup50-201ENSMUST00000165443 Sycp2lA0A0M3U1B0 842 aa12.17□□□□□ -0.46
Nup50-201ENSMUST00000165443 Kdm4aQ8BW72 1064 aa12.17□□□□□ -0.46
Nup50-201ENSMUST00000165443 Pkd2l2Q9JLG4 621 aa12.17□□□□□ -0.46
Nup50-201ENSMUST00000165443 NhsB1AV60 1647 aa12.17□□□□□ -0.46
Nup50-201ENSMUST00000165443 PtprtQ99M80 1454 aa12.17□□□□□ -0.46
Nup50-201ENSMUST00000165443 Mcm10Q0VBD2 885 aa12.17□□□□□ -0.46
Nup50-201ENSMUST00000165443 Ccdc162pQ0VG85 912 aa12.17□□□□□ -0.46
Nup50-201ENSMUST00000165443 Ppp4r3aQ6P2K6 820 aa12.17□□□□□ -0.46
Nup50-201ENSMUST00000165443 Ccdc155Q80VJ8 648 aa12.17□□□□□ -0.46
Nup50-201ENSMUST00000165443 Ano2Q8CFW1 1002 aa12.17□□□□□ -0.46
Nup50-201ENSMUST00000165443 Rdm1Q9CQK3 281 aa12.17□□□□□ -0.46
Nup50-201ENSMUST00000165443 PtprgQ05909 1442 aa12.17□□□□□ -0.46
Nup50-201ENSMUST00000165443 NpcdF8VQB8 469 aa12.17□□□□□ -0.46
Nup50-201ENSMUST00000165443 Kcnj4P52189 445 aa12.17□□□□□ -0.46
Nup50-201ENSMUST00000165443 Smarcc1P97496 1104 aa12.17□□□□□ -0.46
Nup50-201ENSMUST00000165443 Igf2bp2Q5SF07 592 aaKnown RBP12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Ift88Q61371 824 aa12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Cul5Q9D5V5 780 aa12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Atp8b3Q6UQ17 1335 aa12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Vamp4O70480 141 aa12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Nop53Q8BK35 484 aaKnown RBP12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Als2cr12Q8BVM7 383 aa12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 ClasrpQ8CFC7 668 aa12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Kiaa1210E9Q0C6 1637 aa12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Znf608Q56A10 1511 aa12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Zfp853A0A1D5RM95 733 aa12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Tyro3P55144 880 aa12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Ppp1r21Q3TDD9 780 aa12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Esyt1Q3U7R1 1092 aaKnown RBP12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Amotl1Q9D4H4 968 aa12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Klhl10Q9D5V2 608 aa12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Cpsf1Q9EPU4 1441 aaKnown RBP12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 CebpzP53569 1052 aaKnown RBP12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Aplp1Q03157 653 aa12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Pde1cQ64338 706 aa12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Fam76aQ922G2 307 aa12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 Chd1lQ9CXF7 900 aa12.16□□□□□ -0.46
Nup50-201ENSMUST00000165443 GnaqP21279 359 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 Kif2aP28740 705 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 Dnm1P39053 867 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 Grm8P47743 908 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 Zkscan4Q5SZT6 480 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 Krt79Q8VED5 531 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 Syt10Q9R0N4 523 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 Prr29B1ARI9 187 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 Fam83gQ5SWY7 812 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 Ano1Q8BHY3 960 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 Klhl30Q8C3F7 581 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 WtapQ9ER69 396 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 Taf7Q9R1C0 341 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 Setdb1O88974 1307 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 Chd1P40201 1711 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 Serpinb6bO08804 377 aa12.15□□□□□ -0.46
Nup50-201ENSMUST00000165443 Hand2Q61039 217 aa12.15□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 60 ms