RNA–Protein interactions for RNA: ENSMUST00000111049.8

Bdnf-208, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,830 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-208ENSMUST00000111049 CebpzP53569 1052 aaKnown RBP9.72□□□□□ -0.85
Bdnf-208ENSMUST00000111049 Ripply1Q2WG77 201 aa9.72□□□□□ -0.85
Bdnf-208ENSMUST00000111049 Tbc1d31Q6NXY1 996 aa9.72□□□□□ -0.85
Bdnf-208ENSMUST00000111049 SympkQ80X82 1284 aa9.72□□□□□ -0.85
Bdnf-208ENSMUST00000111049 Srgap1Q91Z69 1062 aa9.72□□□□□ -0.85
Bdnf-208ENSMUST00000111049 PplQ9R269 1755 aa9.72□□□□□ -0.85
Bdnf-208ENSMUST00000111049 Msh6P54276 1358 aaKnown RBP9.72□□□□□ -0.85
Bdnf-208ENSMUST00000111049 Nol10Q5RJG1 687 aaKnown RBP9.72□□□□□ -0.85
Bdnf-208ENSMUST00000111049 Leo1Q5XJE5 667 aa9.72□□□□□ -0.85
Bdnf-208ENSMUST00000111049 Larp1Q6ZQ58 1072 aaKnown RBP9.72□□□□□ -0.85
Bdnf-208ENSMUST00000111049 Kdm6aO70546 1401 aa9.72□□□□□ -0.85
Bdnf-208ENSMUST00000111049 Aox1O54754 1333 aa9.72□□□□□ -0.85
Bdnf-208ENSMUST00000111049 Taf3Q5HZG4 932 aa9.72□□□□□ -0.85
Bdnf-208ENSMUST00000111049 Erc1Q99MI1 1120 aa9.72□□□□□ -0.85
Bdnf-208ENSMUST00000111049 Zfp804bA0A0G2JGH6 1343 aa9.72□□□□□ -0.85
Bdnf-208ENSMUST00000111049 Pik3c2bE9QAN8 1632 aa9.71□□□□□ -0.85
Bdnf-208ENSMUST00000111049 Gm45140A0A0N4SUM8 220 aa9.71□□□□□ -0.85
Bdnf-208ENSMUST00000111049 Rbbp8nlA2ABX0 614 aa9.71□□□□□ -0.85
Bdnf-208ENSMUST00000111049 Tmem87bQ8BKU8 555 aa9.71□□□□□ -0.85
Bdnf-208ENSMUST00000111049 Tbc1d8Q9Z1A9 1134 aa9.71□□□□□ -0.85
Bdnf-208ENSMUST00000111049 Ptgs1P22437 602 aa9.71□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Ano1Q8BHY3 960 aa9.71□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Rps6kb1Q8BSK8 525 aa9.71□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Srek1Q8BZX4 494 aaKnown RBP9.71□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Add2Q9QYB8 725 aa9.71□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Col1a2Q01149 1372 aa9.71□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Cfap99A0A140LIX9 648 aa9.71□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Ets1P27577 440 aa9.71□□□□□ -0.86
Bdnf-208ENSMUST00000111049 FanccP50652 591 aa9.71□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Bach1P97302 739 aa9.71□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Pkp1P97350 728 aaKnown RBP9.71□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Limch1Q3UH68 1057 aa9.71□□□□□ -0.86
Bdnf-208ENSMUST00000111049 HellsQ60848 821 aa9.71□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Jarid2Q62315 1234 aa9.71□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Pnma3Q8JZW8 466 aa9.71□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Fsd1Q7TPM6 496 aa9.7□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Sass6Q80UK7 654 aa9.7□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Rps6ka5Q8C050 863 aa9.7□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Cd22P35329 862 aa9.7□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Fkbp5Q64378 456 aa9.7□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Ppp1r10Q80W00 888 aaKnown RBP9.7□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Fam228bQ497Q6 232 aa9.7□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Soga3Q6NZL0 945 aa9.7□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Mx2Q9WVP9 655 aa9.7□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Gm21698A0A087WQP8 267 aa9.69□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Gm21671G3UY31 267 aa9.69□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Skap1Q3UUV5 355 aa9.69□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Dnajc5gQ8C632 165 aa9.69□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Spata31d1bE9QA57 1361 aa9.69□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Abcc12Q80WJ6 1366 aa9.69□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Ddx46Q569Z5 1032 aaKnown RBP9.69□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Nek11Q8C0Q4 628 aa9.69□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Pms1Q8K119 917 aa9.69□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Tmem119Q8R138 280 aa9.69□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Plcd1Q8R3B1 756 aa9.69□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Stard3nlQ9DCI3 235 aa9.69□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Pnpla7A2AJ88 1352 aa9.69□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Ugt1a5B2RT14 529 aa9.69□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Lekr1B2RVN1 116 aa9.69□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Ncoa4Q5U4H9 625 aa9.69□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Irx4Q9QY61 515 aa9.69□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Fam50bQ9WTJ8 334 aa9.69□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Cbx1P83917 185 aaKnown RBP9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Me3Q8BMF3 604 aa9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Zfp113Q8C689 439 aa9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Ttc27Q8CD92 847 aa9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Ccdc158Q8CDI6 1109 aa9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Mtmr3Q8K296 1196 aa9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Mrpl50Q8VDT9 159 aaKnown RBP9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Rrs1Q9CYH6 365 aaKnown RBP9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Abcc10Q8R4P9 1501 aa9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Eef2kO08796 724 aa9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 PnnO35691 725 aaKnown RBP9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Cct2P80314 535 aaKnown RBP9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Gnat3Q3V3I2 354 aa9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Ddx58Q6Q899 926 aa9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Rufy2Q8R4C2 606 aa9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Ccdc94Q9D6J3 314 aa9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Adcy9P51830 1353 aa9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Ubash3aQ3V3E1 624 aa9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Dzip1Q8BMD2 852 aa9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 4930504O13RikQ8C5Z9 145 aa9.68□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Ncbp1Q3UYV9 790 aaKnown RBP9.67□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Dmrt2Q8BG36 561 aa9.67□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Stk38Q91VJ4 465 aa9.67□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Mrpl44Q9CY73 333 aaKnown RBP9.67□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Zfp251Q6PCX8 632 aa9.67□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Golim4Q8BXA1 655 aa9.67□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Add3Q9QYB5 706 aaKnown RBP9.67□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Ccdc112A0AUP1 442 aa9.67□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Ppfia3P60469 1194 aa9.67□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Slu7Q8BHJ9 585 aa9.67□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Flad1Q8R123 492 aa9.67□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Dnaaf4Q8R368 420 aa9.67□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Lrrfip2Q91WK0 415 aa9.67□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Stx1aO35526 288 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Irf5P56477 497 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Nom1Q3UFM5 854 aaKnown RBP9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 Ankle2Q6P1H6 964 aa9.66□□□□□ -0.86
Bdnf-208ENSMUST00000111049 ThemisQ8BGW0 636 aa9.66□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms