RNA–Protein interactions for RNA: ENSMUST00000106618.7

Ttc39a-202, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39a, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-202ENSMUST00000106618 Ddb1Q3U1J4 1140 aaKnown RBP13.02□□□□□ -0.32
Ttc39a-202ENSMUST00000106618 Gnl3lQ6PGG6 577 aaKnown RBP13.02□□□□□ -0.32
Ttc39a-202ENSMUST00000106618 Jakmip1Q8BVL9 626 aa13.02□□□□□ -0.32
Ttc39a-202ENSMUST00000106618 Zbtb1Q91VL9 713 aa13.02□□□□□ -0.32
Ttc39a-202ENSMUST00000106618 Ssc5dQ8BV57 1371 aa13.02□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Casq1O09165 405 aa13.01□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Neurod6P48986 337 aa13.01□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Ppp4r3aQ6P2K6 820 aa13.01□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Clca2Q8BG22 942 aa13.01□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Tmc2Q8R4P4 888 aa13.01□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Greb1lB9EJV3 1913 aa13.01□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 AppP12023 770 aa13.01□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 NexnQ7TPW1 607 aa13.01□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Top1mtQ8R4U6 593 aa13.01□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Ric1Q69ZJ7 1422 aa13.01□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Col22a1E9Q7P1 1613 aa13□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Vwa3bJ9JI28 736 aa13□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Cyp19a1P28649 503 aa13□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Smc4Q8CG47 1286 aa13□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 AnlnQ8K298 1121 aaKnown RBP13□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Ankrd31A0A140LI88 1765 aa13□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Ttc19Q8CC21 365 aa13□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Rhot2Q8JZN7 620 aa13□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Add2Q9QYB8 725 aa13□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Myh1Q5SX40 1942 aa12.99□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Eya2O08575 532 aa12.99□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Igflr1Q3U4N7 345 aa12.99□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 NfkbibQ60778 359 aa12.99□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Fam102bQ8BQS4 339 aa12.99□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Slc5a4bQ91ZP4 660 aa12.99□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Rrs1Q9CYH6 365 aaKnown RBP12.99□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Rbm27Q5SFM8 1060 aaKnown RBP12.98□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Pdzrn3Q69ZS0 1063 aa12.98□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Nlrp3Q8R4B8 1033 aa12.98□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Phactr2B1AVP0 632 aa12.98□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Plcb3P51432 1234 aaKnown RBP12.98□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Ifit2Q64112 472 aa12.98□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Ddx11Q6AXC6 880 aa12.98□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Ccdc7Q9D541 371 aa12.98□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 EvcP57680 1005 aa12.97□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Ggt6Q6PDE7 497 aa12.97□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Eno4Q8C042 619 aa12.97□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Ciao1Q99KN2 339 aa12.97□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Rbbp8nlA2ABX0 614 aa12.96□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Fkbp1aP26883 108 aaKnown RBP12.96□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Timm10P62073 90 aa12.96□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Utp18Q5SSI6 552 aaKnown RBP12.96□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Ssh1Q76I79 1042 aa12.96□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Ubxn10Q8BG34 277 aa12.96□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Zkscan1Q8BGS3 561 aaKnown RBP12.96□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 GptQ8QZR5 496 aa12.96□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Chmp3Q9CQ10 224 aa12.96□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Slx4ipQ9D7Y9 413 aa12.96□□□□□ -0.33
Ttc39a-202ENSMUST00000106618 Prr5lA2AVJ5 370 aa12.96□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Mdm2P23804 489 aa12.96□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Sf3b2Q3UJB0 878 aaKnown RBP12.96□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Vps54Q5SPW0 977 aa12.96□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Slfnl1Q8BHW9 410 aa12.96□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 ZyxQ62523 564 aa12.95□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 DiexfQ8BTT6 772 aaKnown RBP12.95□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Rapgef4Q9EQZ6 1011 aa12.95□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Ak2Q9WTP6 239 aa12.95□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Rbm8a2A0A0N4SUH6 174 aa12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Cops6O88545 324 aa12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Bsdc1Q80Y55 427 aa12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Miga2Q8BK03 593 aa12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 KinQ8K339 391 aa12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Bloc1s4Q8VED2 215 aa12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Ncoa5Q91W39 579 aaKnown RBP12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Rbm8aQ9CWZ3 174 aa12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Lama4P97927 1816 aa12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Kcnb2A6H8H5 907 aa12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Zdhhc9P59268 364 aa12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Gjb2Q00977 226 aa12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Gsdma2Q32M21 443 aa12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Asap2Q7SIG6 958 aa12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Ints3Q7TPD0 1041 aaKnown RBP12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Klc3Q91W40 508 aa12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Bmp2kQ91Z96 1138 aa12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Gdpd2Q9ESM6 539 aa12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Foxo4Q9WVH3 505 aa12.94□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Nphp3Q7TNH6 1325 aa12.93□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Smarce1O54941 411 aaKnown RBP12.93□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 BcanQ61361 883 aa12.93□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Esco1Q69Z69 843 aa12.93□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Dmrt2Q8BG36 561 aa12.93□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Chmp4cQ9D7F7 232 aa12.93□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Rps6ka4Q9Z2B9 773 aa12.93□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Ugt1a5B2RT14 529 aa12.92□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Slc4a1P04919 929 aa12.92□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Ftl2P49945 183 aa12.92□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Zbtb38Q3LR78 1197 aa12.92□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Ddx46Q569Z5 1032 aaKnown RBP12.92□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Nol10Q5RJG1 687 aaKnown RBP12.92□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Filip1lQ6P6L0 1131 aa12.92□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 StrbpQ91WM1 672 aaKnown RBP12.92□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Atp6v1dP57746 247 aa12.92□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Strn4P58404 760 aa12.92□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Sgsm2Q80U12 1005 aa12.92□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Tti2Q8BGV4 512 aa12.92□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 59 ms