RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Gm12185Q5NCB2 835 aa22.06■■□□□ 1.12
Trim47-202ENSMUST00000106441 St18Q80TY4 1045 aa22.06■■□□□ 1.12
Trim47-202ENSMUST00000106441 Slc39a6Q8C145 765 aa22.06■■□□□ 1.12
Trim47-202ENSMUST00000106441 Ripk4Q9ERK0 786 aa22.06■■□□□ 1.12
Trim47-202ENSMUST00000106441 Adamtsl1Q8BLI0 1745 aa22.05■■□□□ 1.12
Trim47-202ENSMUST00000106441 Becn1O88597 448 aa22.05■■□□□ 1.12
Trim47-202ENSMUST00000106441 Hsp90b1P08113 802 aaKnown RBP22.05■■□□□ 1.12
Trim47-202ENSMUST00000106441 Col4a1P02463 1669 aa22.05■■□□□ 1.12
Trim47-202ENSMUST00000106441 Gm9992B2RWK3 458 aa22.05■■□□□ 1.12
Trim47-202ENSMUST00000106441 Unc93aQ710D3 458 aa22.05■■□□□ 1.12
Trim47-202ENSMUST00000106441 KinQ8K339 391 aa22.05■■□□□ 1.12
Trim47-202ENSMUST00000106441 Erbb4Q61527 1308 aa22.04■■□□□ 1.12
Trim47-202ENSMUST00000106441 Snapc4Q8BP86 1333 aa22.03■■□□□ 1.12
Trim47-202ENSMUST00000106441 MetP16056 1379 aa22.03■■□□□ 1.12
Trim47-202ENSMUST00000106441 Kif4P33174 1231 aa22.03■■□□□ 1.12
Trim47-202ENSMUST00000106441 Prune1Q8BIW1 454 aa22.03■■□□□ 1.12
Trim47-202ENSMUST00000106441 Erich6bQ9D4S6 220 aa22.03■■□□□ 1.12
Trim47-202ENSMUST00000106441 Disp3A3KFU9 1347 aa22.03■■□□□ 1.12
Trim47-202ENSMUST00000106441 Pdia4P08003 638 aaKnown RBP22.02■■□□□ 1.12
Trim47-202ENSMUST00000106441 Cwc27Q3TKY6 469 aa22.02■■□□□ 1.12
Trim47-202ENSMUST00000106441 Ddx19aQ61655 478 aaKnown RBP22.02■■□□□ 1.12
Trim47-202ENSMUST00000106441 Ankrd13dQ6PD24 605 aa22.02■■□□□ 1.12
Trim47-202ENSMUST00000106441 Miga2Q8BK03 593 aa22.02■■□□□ 1.12
Trim47-202ENSMUST00000106441 Gripap1Q8VD04 806 aa22.02■■□□□ 1.12
Trim47-202ENSMUST00000106441 Strn4P58404 760 aa22.02■■□□□ 1.12
Trim47-202ENSMUST00000106441 Trim52Q8CDV4 233 aa22.02■■□□□ 1.12
Trim47-202ENSMUST00000106441 Echdc1Q9D9V3 322 aa22.02■■□□□ 1.12
Trim47-202ENSMUST00000106441 Smarcc1P97496 1104 aa22.01■■□□□ 1.11
Trim47-202ENSMUST00000106441 Kdm4aQ8BW72 1064 aa22.01■■□□□ 1.11
Trim47-202ENSMUST00000106441 Ccdc7Q9D541 371 aa22.01■■□□□ 1.11
Trim47-202ENSMUST00000106441 Flt4P35917 1363 aa22.01■■□□□ 1.11
Trim47-202ENSMUST00000106441 Cyp2d11P24457 504 aa22.01■■□□□ 1.11
Trim47-202ENSMUST00000106441 Nip7Q9CXK8 180 aaKnown RBP22.01■■□□□ 1.11
Trim47-202ENSMUST00000106441 Rgs17Q9QZB0 210 aa22■■□□□ 1.11
Trim47-202ENSMUST00000106441 Ccdc6D3YZP9 469 aa21.99■■□□□ 1.11
Trim47-202ENSMUST00000106441 CalcaP70160 136 aa21.99■■□□□ 1.11
Trim47-202ENSMUST00000106441 Irf9Q61179 399 aa21.99■■□□□ 1.11
Trim47-202ENSMUST00000106441 Pim2Q62070 370 aa21.99■■□□□ 1.11
Trim47-202ENSMUST00000106441 Mum1Q6DID5 682 aa21.99■■□□□ 1.11
Trim47-202ENSMUST00000106441 Phactr2B1AVP0 632 aa21.99■■□□□ 1.11
Trim47-202ENSMUST00000106441 Igfbp6P47880 238 aa21.99■■□□□ 1.11
Trim47-202ENSMUST00000106441 Mknk2Q8CDB0 459 aa21.99■■□□□ 1.11
Trim47-202ENSMUST00000106441 EvcP57680 1005 aa21.98■■□□□ 1.11
Trim47-202ENSMUST00000106441 Zbtb1Q91VL9 713 aa21.98■■□□□ 1.11
Trim47-202ENSMUST00000106441 Gigyf1Q99MR1 1044 aaKnown RBP21.98■■□□□ 1.11
Trim47-202ENSMUST00000106441 Ttll7A4Q9F0 912 aa21.98■■□□□ 1.11
Trim47-202ENSMUST00000106441 Syce3B5KM66 88 aa21.98■■□□□ 1.11
Trim47-202ENSMUST00000106441 Utp18Q5SSI6 552 aaKnown RBP21.98■■□□□ 1.11
Trim47-202ENSMUST00000106441 Rbm10Q99KG3 930 aaKnown RBP21.98■■□□□ 1.11
Trim47-202ENSMUST00000106441 CoblQ5NBX1 1337 aaKnown RBP21.97■■□□□ 1.11
Trim47-202ENSMUST00000106441 Ankle2Q6P1H6 964 aa21.97■■□□□ 1.11
Trim47-202ENSMUST00000106441 Ints3Q7TPD0 1041 aaKnown RBP21.97■■□□□ 1.11
Trim47-202ENSMUST00000106441 Hmgb2P30681 210 aaKnown RBP21.96■■□□□ 1.11
Trim47-202ENSMUST00000106441 Pmfbp1Q9WVQ0 1022 aa21.96■■□□□ 1.11
Trim47-202ENSMUST00000106441 Gm13023A2A8N2 498 aa21.95■■□□□ 1.1
Trim47-202ENSMUST00000106441 Gadd45bP22339 160 aa21.95■■□□□ 1.1
Trim47-202ENSMUST00000106441 Tpx2A2APB8 745 aaKnown RBP21.95■■□□□ 1.1
Trim47-202ENSMUST00000106441 Ms4a2P20490 235 aa21.95■■□□□ 1.1
Trim47-202ENSMUST00000106441 Cct4P80315 539 aaKnown RBP21.95■■□□□ 1.1
Trim47-202ENSMUST00000106441 C4bP01029 1738 aa21.95■■□□□ 1.1
Trim47-202ENSMUST00000106441 Pdzrn3Q69ZS0 1063 aa21.94■■□□□ 1.1
Trim47-202ENSMUST00000106441 Rcan3Q9JKK0 239 aa21.94■■□□□ 1.1
Trim47-202ENSMUST00000106441 Sipa1l3G3X9J0 1776 aa21.94■■□□□ 1.1
Trim47-202ENSMUST00000106441 Lekr1B2RVN1 116 aa21.94■■□□□ 1.1
Trim47-202ENSMUST00000106441 Ier5O89113 308 aa21.94■■□□□ 1.1
Trim47-202ENSMUST00000106441 Map3k2Q61083 619 aa21.94■■□□□ 1.1
Trim47-202ENSMUST00000106441 Brpf1B2RRD7 1212 aa21.93■■□□□ 1.1
Trim47-202ENSMUST00000106441 Jakmip1Q8BVL9 626 aa21.93■■□□□ 1.1
Trim47-202ENSMUST00000106441 Rapgef4Q9EQZ6 1011 aa21.93■■□□□ 1.1
Trim47-202ENSMUST00000106441 Exoc6bA6H5Z3 810 aa21.92■■□□□ 1.1
Trim47-202ENSMUST00000106441 Unc5clQ6R653 518 aa21.92■■□□□ 1.1
Trim47-202ENSMUST00000106441 Bicc1Q99MQ1 977 aaKnown RBP21.92■■□□□ 1.1
Trim47-202ENSMUST00000106441 Apba2P98084 750 aa21.92■■□□□ 1.1
Trim47-202ENSMUST00000106441 Rad50P70388 1312 aa21.91■■□□□ 1.1
Trim47-202ENSMUST00000106441 Hspa2P17156 633 aa21.91■■□□□ 1.1
Trim47-202ENSMUST00000106441 Tshz3Q8CGV9 1081 aa21.91■■□□□ 1.1
Trim47-202ENSMUST00000106441 Zscan25B2RX31 543 aa21.89■■□□□ 1.1
Trim47-202ENSMUST00000106441 Gnl3lQ6PGG6 577 aaKnown RBP21.89■■□□□ 1.1
Trim47-202ENSMUST00000106441 Slfnl1Q8BHW9 410 aa21.89■■□□□ 1.1
Trim47-202ENSMUST00000106441 Ddx60E9PZQ1 1711 aa21.89■■□□□ 1.09
Trim47-202ENSMUST00000106441 Irf5P56477 497 aa21.89■■□□□ 1.09
Trim47-202ENSMUST00000106441 Pnma3Q8JZW8 466 aa21.89■■□□□ 1.09
Trim47-202ENSMUST00000106441 Ccdc173A0JLY1 547 aa21.88■■□□□ 1.09
Trim47-202ENSMUST00000106441 Lrrc43Q3V0L5 667 aa21.88■■□□□ 1.09
Trim47-202ENSMUST00000106441 Zbtb40Q6PCS8 1258 aa21.88■■□□□ 1.09
Trim47-202ENSMUST00000106441 Mphosph10Q810V0 681 aaKnown RBP21.88■■□□□ 1.09
Trim47-202ENSMUST00000106441 Prr5lA2AVJ5 370 aa21.88■■□□□ 1.09
Trim47-202ENSMUST00000106441 Prr29B1ARI9 187 aa21.88■■□□□ 1.09
Trim47-202ENSMUST00000106441 Pde3bQ61409 1100 aa21.88■■□□□ 1.09
Trim47-202ENSMUST00000106441 Slx4ipQ9D7Y9 413 aa21.88■■□□□ 1.09
Trim47-202ENSMUST00000106441 Elmsan1E9Q2I4 1089 aaKnown RBP21.87■■□□□ 1.09
Trim47-202ENSMUST00000106441 Gzf1Q4VBD9 706 aa21.87■■□□□ 1.09
Trim47-202ENSMUST00000106441 Ccar2Q8VDP4 922 aaKnown RBP21.87■■□□□ 1.09
Trim47-202ENSMUST00000106441 Fam184aE9PW83 1143 aa21.87■■□□□ 1.09
Trim47-202ENSMUST00000106441 Lama4P97927 1816 aa21.86■■□□□ 1.09
Trim47-202ENSMUST00000106441 NcapgE9PWG6 1004 aa21.86■■□□□ 1.09
Trim47-202ENSMUST00000106441 Tbc1d30Q69ZT9 766 aa21.86■■□□□ 1.09
Trim47-202ENSMUST00000106441 Bend3Q6PAL0 825 aa21.86■■□□□ 1.09
Trim47-202ENSMUST00000106441 Cpa2Q504N0 417 aa21.85■■□□□ 1.09
Trim47-202ENSMUST00000106441 Mindy4Q3UQI9 744 aa21.85■■□□□ 1.09
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms