RNA–Protein interactions for RNA: ENSMUST00000106118.9

Ebf3-202, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 3,736 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-202ENSMUST00000106118 CalcaP70160 136 aa13.49□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Adora1Q60612 326 aa13.49□□□□□ -0.25
Ebf3-202ENSMUST00000106118 KinQ8K339 391 aa13.49□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Nip7Q9CXK8 180 aaKnown RBP13.49□□□□□ -0.25
Ebf3-202ENSMUST00000106118 DmtnQ9WV69 405 aa13.49□□□□□ -0.25
Ebf3-202ENSMUST00000106118 AK157302I3ITR1 129 aa13.49□□□□□ -0.25
Ebf3-202ENSMUST00000106118 EngaseQ8BX80 734 aa13.49□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Bcl2l12Q9D3J3 255 aa13.49□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Isca1Q9D924 129 aa13.49□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Zkscan16A2ALW2 728 aa13.48□□□□□ -0.25
Ebf3-202ENSMUST00000106118 MecomP14404 1042 aa13.48□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Jakmip1Q8BVL9 626 aa13.48□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Rapgef4Q9EQZ6 1011 aa13.48□□□□□ -0.25
Ebf3-202ENSMUST00000106118 PhaxQ9JJT9 385 aaKnown RBP13.48□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Nlrp1aQ2LKU9 1182 aa13.48□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Mctp2Q5RJH2 878 aa13.48□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Ttc19Q8CC21 365 aa13.48□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Filip1lQ6P6L0 1131 aa13.47□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Gsdma2Q32M21 443 aa13.47□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Rrp9Q91WM3 475 aaKnown RBP13.47□□□□□ -0.25
Ebf3-202ENSMUST00000106118 PappaQ8R4K8 1624 aa13.47□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Pcmtd1P59913 357 aa13.47□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Fam228bQ497Q6 232 aa13.47□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Zkscan1Q8BGS3 561 aaKnown RBP13.47□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Ints3Q7TPD0 1041 aaKnown RBP13.46□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Emilin2Q8K482 1074 aa13.46□□□□□ -0.25
Ebf3-202ENSMUST00000106118 MsnP26041 577 aaKnown RBP13.46□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Cyp27a1Q9DBG1 533 aa13.46□□□□□ -0.25
Ebf3-202ENSMUST00000106118 Rad50P70388 1312 aa13.46□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Sult6b1P0CC03 303 aa13.46□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Ets1P27577 440 aa13.46□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Ccdc129Q14B48 1034 aa13.46□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Pmfbp1Q9WVQ0 1022 aa13.46□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Phactr2B1AVP0 632 aa13.45□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Edc3Q8K2D3 508 aaKnown RBP13.45□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Klc3Q91W40 508 aa13.45□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Kdm3aQ6PCM1 1323 aa13.45□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Nav1Q8CH77 1875 aa13.45□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Ltb4r2Q9JJL9 360 aa13.44□□□□□ -0.26
Ebf3-202ENSMUST00000106118 MetP16056 1379 aa13.44□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Sos2Q02384 1333 aa13.44□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Ddrgk1Q80WW9 315 aa13.44□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Rrs1Q9CYH6 365 aaKnown RBP13.44□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Il1rapl2Q9ERS6 686 aa13.44□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Lrp6O88572 1613 aa13.44□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Eya2O08575 532 aa13.43□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Rnf20Q5DTM8 973 aa13.43□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Cchcr1Q8K2I2 770 aa13.43□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Kat6bQ8BRB7 1872 aa13.43□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Mrc1Q61830 1456 aa13.43□□□□□ -0.26
Ebf3-202ENSMUST00000106118 NfkbibQ60778 359 aa13.42□□□□□ -0.26
Ebf3-202ENSMUST00000106118 St18Q80TY4 1045 aa13.42□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Rnf214Q8BFU3 668 aaKnown RBP13.42□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Tmem266Q8BZB3 538 aa13.42□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Psrc1Q9D0P7 329 aa13.42□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Trim34bJ3QNR8 485 aa13.42□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Pdia4P08003 638 aaKnown RBP13.42□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Strn4P58404 760 aa13.42□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Clcn1Q64347 994 aa13.42□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Dis3l2Q8CI75 870 aaKnown RBP13.42□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Ciao1Q99KN2 339 aa13.42□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Tmc2Q8R4P4 888 aa13.42□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Trim34aQ99PP6 485 aa13.42□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Rbbp8nlA2ABX0 614 aa13.41□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Plcb3P51432 1234 aaKnown RBP13.41□□□□□ -0.26
Ebf3-202ENSMUST00000106118 EspnlQ3UYR4 1005 aa13.41□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Casc1Q6TDU8 730 aa13.41□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Tshz3Q8CGV9 1081 aa13.41□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Nsfl1cQ9CZ44 370 aaKnown RBP13.41□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Jarid2Q62315 1234 aa13.41□□□□□ -0.26
Ebf3-202ENSMUST00000106118 BcanQ61361 883 aa13.41□□□□□ -0.26
Ebf3-202ENSMUST00000106118 DbnlQ62418 436 aa13.41□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Ddx19aQ61655 478 aaKnown RBP13.4□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Ssh1Q76I79 1042 aa13.4□□□□□ -0.26
Ebf3-202ENSMUST00000106118 GptQ8QZR5 496 aa13.4□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Zbtb1Q91VL9 713 aa13.4□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Psma5Q9Z2U1 241 aaKnown RBP13.4□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Hspa1lP16627 641 aa13.4□□□□□ -0.26
Ebf3-202ENSMUST00000106118 EvcP57680 1005 aa13.4□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Ifit2Q64112 472 aa13.4□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Dhx38Q80X98 1228 aa13.4□□□□□ -0.26
Ebf3-202ENSMUST00000106118 4930504O13RikQ8C5Z9 145 aa13.4□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Ms4a2P20490 235 aa13.4□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Mlh1Q9JK91 760 aa13.4□□□□□ -0.26
Ebf3-202ENSMUST00000106118 Clca2Q8BG22 942 aa13.39□□□□□ -0.27
Ebf3-202ENSMUST00000106118 Krt25Q8VCW2 446 aa13.39□□□□□ -0.27
Ebf3-202ENSMUST00000106118 LratQ9JI60 231 aa13.39□□□□□ -0.27
Ebf3-202ENSMUST00000106118 Erc1Q99MI1 1120 aa13.39□□□□□ -0.27
Ebf3-202ENSMUST00000106118 InhbeO08717 350 aa13.39□□□□□ -0.27
Ebf3-202ENSMUST00000106118 Cops6O88545 324 aa13.39□□□□□ -0.27
Ebf3-202ENSMUST00000106118 Fkbp1aP26883 108 aaKnown RBP13.39□□□□□ -0.27
Ebf3-202ENSMUST00000106118 Gjb2Q00977 226 aa13.39□□□□□ -0.27
Ebf3-202ENSMUST00000106118 Utp18Q5SSI6 552 aaKnown RBP13.39□□□□□ -0.27
Ebf3-202ENSMUST00000106118 Slf2Q6P9P0 1278 aa13.39□□□□□ -0.27
Ebf3-202ENSMUST00000106118 Rdm1Q9CQK3 281 aa13.39□□□□□ -0.27
Ebf3-202ENSMUST00000106118 Antxr1Q9CZ52 562 aa13.39□□□□□ -0.27
Ebf3-202ENSMUST00000106118 Esco1Q69Z69 843 aa13.38□□□□□ -0.27
Ebf3-202ENSMUST00000106118 Pdzrn3Q69ZS0 1063 aa13.38□□□□□ -0.27
Ebf3-202ENSMUST00000106118 Q9D9S1 216 aa13.38□□□□□ -0.27
Ebf3-202ENSMUST00000106118 Mybbp1aQ7TPV4 1344 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 21.2 ms