RNA–Protein interactions for RNA: ENSMUST00000106035.7

Ccdc28b-202, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

TSL 1 (best) BASIC

Gene Ccdc28b, Length 821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-202ENSMUST00000106035 Ddx58Q6Q899 926 aa15.72■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Ppm1mQ8BU27 406 aa15.72■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Gja10Q9WUS4 505 aa15.72■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Ank1Q02357 1862 aa15.71■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Vsig10D3YX43 558 aa15.71■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Cops6O88545 324 aa15.71■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Cyp2d11P24457 504 aa15.71■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 SobpQ0P5V2 864 aa15.71■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Neurod2Q62414 383 aa15.71■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Nup188Q6ZQH8 1759 aa15.71■□□□□ 0.11
Ccdc28b-202ENSMUST00000106035 Zfp646Q6NV66 1788 aa15.7■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Gm7347D3YYI9 267 aa15.7■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Speer4aF8VPX6 267 aa15.7■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Vamp4O70480 141 aa15.7■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Chl1P70232 1209 aa15.7■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Eif4g2Q62448 906 aaKnown RBP15.7■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Ehd4Q9EQP2 541 aa15.7■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Kank1E9Q238 1360 aa15.7■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Btaf1E9QAE3 1848 aa15.69■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Myh1Q5SX40 1942 aa15.69■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Fam83gQ5SWY7 812 aa15.69■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Fkbp5Q64378 456 aa15.69■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Gja3Q64448 417 aa15.69■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 NrdcQ8BHG1 1161 aa15.69■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Mybbp1aQ7TPV4 1344 aaKnown RBP15.68■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Cyp7a1Q64505 503 aa15.68■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Clca2Q8BG22 942 aa15.68■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Cwc25Q9DBF7 416 aa15.68■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Stard3nlQ9DCI3 235 aa15.68■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Slc4a9E9PUP3 929 aa15.67■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Map3k2Q61083 619 aa15.67■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Gpr101Q80T62 511 aa15.67■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Sv2bQ8BG39 683 aa15.67■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 GptQ8QZR5 496 aa15.67■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Fam213aQ9CYH2 218 aa15.67■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Ksr2Q3UVC0 959 aa15.66■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 DaglaQ6WQJ1 1044 aa15.66■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Sde2Q8K1J5 448 aaKnown RBP15.66■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Myo3bQ1EG27 1305 aa15.66■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Oas2E9Q9A9 742 aa15.65■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Hoxd11P23813 323 aa15.65■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 CanxP35564 591 aaKnown RBP15.65■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Igflr1Q3U4N7 345 aa15.65■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Best3Q6H1V1 669 aa15.65■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Znf428Q8C1M2 176 aa15.65■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Dydc2Q9D3X8 139 aa15.65■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Adarb2Q9JI20 745 aa15.65■□□□□ 0.1
Ccdc28b-202ENSMUST00000106035 Greb1lB9EJV3 1913 aa15.64■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Chrna5Q2MKA5 467 aa15.64■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Zbtb38Q3LR78 1197 aa15.64■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Psmd1Q3TXS7 953 aa15.64■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 NinQ61043 2035 aa15.64■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Ripor2Q80U16 1078 aa15.64■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 KarsQ99MN1 595 aaKnown RBP15.64■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Myoz2Q9JJW5 264 aa15.64■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Tspoap1Q7TNF8 1846 aa15.64■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Glt1d1A4FUP9 346 aa15.63■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Dcdc2bF7BCK0 340 aa15.63■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Rps8P62242 208 aaKnown RBP15.63■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Aplp1Q03157 653 aa15.63■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 HellsQ60848 821 aa15.63■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Glis2Q8VDL9 521 aa15.63■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Eif6O55135 245 aa15.62■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Atp6v1aP50516 617 aaKnown RBP15.62■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Plcb3P51432 1234 aaKnown RBP15.62■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 NfixP70257 488 aa15.62■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Map9Q3TRR0 646 aa15.62■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 EappQ5BU09 281 aa15.62■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Ccdc30Q8BVF4 654 aa15.62■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Map3k15A2AQW0 1331 aa15.62■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Mical3Q8CJ19 1993 aa15.62■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Kif2cQ922S8 721 aa15.61■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 PdgfdQ925I7 370 aa15.61■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Ly6iQ9WU67 134 aa15.61■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Lgr5Q9Z1P4 907 aa15.61■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Heg1E9Q7X6 1337 aa15.61■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Trpm7Q923J1 1863 aa15.61■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Pappa2E9PZ87 1789 aa15.6■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Gm6268A2A3U9 297 aa15.6■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Exoc6bA6H5Z3 810 aa15.6■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Trim34bJ3QNR8 485 aa15.6■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 NmiO35309 314 aa15.6■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Bend4P86174 541 aa15.6■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 VwdeQ6DFV8 926 aa15.6■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Ttc19Q8CC21 365 aa15.6■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Socs7Q8VHQ2 579 aa15.6■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Ltn1Q6A009 1767 aa15.59■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Eddm13E9Q7F5 164 aa15.59■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Cavin2Q63918 418 aaKnown RBP15.59■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Plekhg6Q8R0J1 787 aa15.59■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Naa16Q9DBB4 864 aa15.59■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 4931408C20RikE9PWP9 1381 aa15.59■□□□□ 0.09
Ccdc28b-202ENSMUST00000106035 Gas2l2Q5SSG4 860 aa15.58■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Rad21Q61550 635 aaKnown RBP15.58■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Ccdc93Q7TQK5 629 aa15.58■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Ccar1Q8CH18 1146 aaKnown RBP15.58■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Col1a1P11087 1453 aa15.58■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 EvplQ9D952 2035 aa15.57■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Tom1l2Q5SRX1 507 aa15.57■□□□□ 0.08
Ccdc28b-202ENSMUST00000106035 Ubxn2aQ99KJ0 258 aa15.57■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms