RNA–Protein interactions for RNA: ENSMUST00000065005.4

Atg4d-201, Transcript of Cysteine protease ATG4D, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Atg4d, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4d-201ENSMUST00000065005 Cnot6lQ8VEG6 555 aa17.45■□□□□ 0.38
Atg4d-201ENSMUST00000065005 PrkcshO08795 521 aa17.44■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Dnm1P39053 867 aa17.44■□□□□ 0.38
Atg4d-201ENSMUST00000065005 MthfsQ9D110 203 aa17.44■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Crocc2F6XLV1 1638 aa17.44■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Ptcd1Q8C2E4 695 aaKnown RBP17.44■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Krt79Q8VED5 531 aa17.44■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Klhdc4Q921I2 584 aa17.44■□□□□ 0.38
Atg4d-201ENSMUST00000065005 L3mbtl2P59178 703 aa17.44■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Myl6bQ8CI43 207 aa17.44■□□□□ 0.38
Atg4d-201ENSMUST00000065005 RragbQ6NTA4 374 aa17.44■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Haus2Q9CQS9 234 aa17.44■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Gm1043A0A140LJC2 1431 aa17.44■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Jdp2P97875 163 aa17.43■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Ccdc73Q8CDM4 1066 aa17.43■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Ercc3P49135 783 aa17.43■□□□□ 0.38
Atg4d-201ENSMUST00000065005 U2af1l4Q8BGJ9 220 aa17.43■□□□□ 0.38
Atg4d-201ENSMUST00000065005 4921504E06RikQ8CET2 560 aa17.43■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Tut1Q8R3F9 869 aa17.43■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Hdhd2Q3UGR5 259 aa17.43■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Krt15Q61414 452 aa17.43■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Ranbp6Q8BIV3 1105 aa17.43■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Dydc2Q9D3X8 139 aa17.43■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Bbof1Q3V079 533 aa17.43■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Arid3aQ62431 601 aa17.43■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Bms1Q6PGF5 1284 aaKnown RBP17.43■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Slc4a8Q8JZR6 1089 aa17.43■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Cbx1P83917 185 aaKnown RBP17.43■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Ttc12Q8BW49 704 aa17.43■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Smco2Q9DA21 347 aa17.43■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Rasa1E9PYG6 1038 aa17.42■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Smc5Q8CG46 1101 aaKnown RBP17.42■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Mtmr3Q8K296 1196 aa17.42■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Xrcc4Q924T3 326 aa17.42■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Lmbr1lQ9D1E5 489 aa17.42■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Abcc5Q9R1X5 1436 aa17.42■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Paip2Q9D6V8 124 aa17.42■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Ctage5Q8R311 779 aa17.42■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Smc1bQ920F6 1248 aa17.42■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Zbtb43Q9DAI4 467 aa17.42■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Adcy5P84309 1262 aa17.42■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Ctr9Q62018 1173 aaKnown RBP17.42■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Shtn1Q8K2Q9 631 aa17.42■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Ppfia1B2RXQ2 1266 aa17.41■□□□□ 0.38
Atg4d-201ENSMUST00000065005 RalylQ8BTF8 293 aa17.41■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Lmod1Q8BVA4 595 aa17.41■□□□□ 0.38
Atg4d-201ENSMUST00000065005 NcapgE9PWG6 1004 aa17.41■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Ankrd40Q5SUE8 363 aa17.41■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Gm21985Q6P6P5 1106 aa17.41■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Fam160b2Q80YR2 744 aa17.41■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Rbbp8nlA2ABX0 614 aa17.41■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Als2cr12Q8BVM7 383 aa17.41■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Zmynd15Q8C0R7 736 aa17.41■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Atp2b3Q0VF55 1220 aa17.41■□□□□ 0.38
Atg4d-201ENSMUST00000065005 P4ha1Q60715 534 aa17.41■□□□□ 0.38
Atg4d-201ENSMUST00000065005 AdnpQ9Z103 1108 aaKnown RBP17.41■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Ankrd44B2RXR6 993 aa17.4■□□□□ 0.38
Atg4d-201ENSMUST00000065005 E9QMW4 1145 aa17.4■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Sept7O55131 436 aa17.4■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Smarcc2Q6PDG5 1213 aa17.4■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Snw1Q9CSN1 536 aaKnown RBP17.4■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Mrpl12Q9DB15 201 aaKnown RBP17.4■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Rab3il1Q8VDV3 383 aa17.4■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Calm1P0DP26 149 aaKnown RBP17.4■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Calm2P0DP27 149 aaKnown RBP17.4■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Calm3P0DP28 149 aaKnown RBP17.4■□□□□ 0.38
Atg4d-201ENSMUST00000065005 LarsQ8BMJ2 1178 aa17.4■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Sun3Q5SS91 320 aa17.4■□□□□ 0.38
Atg4d-201ENSMUST00000065005 Cyp4f39Q8BGU0 532 aa17.39■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Emilin2Q8K482 1074 aa17.39■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Fam177a1Q8BR63 207 aa17.39■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Tmem143Q8VD26 458 aa17.39■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Dennd3A2RT67 1274 aa17.39■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Cnnm2Q3TWN3 875 aa17.39■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Amotl2Q8K371 772 aa17.39■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Ccdc12Q8R344 166 aaKnown RBP17.39■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Tex19.1Q99MV2 351 aa17.39■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Naip2Q9QUK4 1447 aa17.39■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Gapvd1Q6PAR5 1458 aa17.38■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Dzip1lQ499E4 774 aa17.38■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Taf7Q9R1C0 341 aa17.38■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Anapc15-psA0A140T8L6 141 aa17.38■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Tbc1d5Q80XQ2 815 aa17.38■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Pde3aQ9Z0X4 1141 aa17.38■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Polr3aB2RXC6 1390 aa17.38■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Wdr63B2RY71 923 aa17.38■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Sde2Q8K1J5 448 aaKnown RBP17.38■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Ttc21aQ8C0S4 1314 aa17.38■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Zkscan7E9PVW1 718 aa17.38■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Serpinc1P32261 465 aa17.38■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Ube2hP62257 183 aa17.38■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Lrsam1Q80ZI6 727 aa17.38■□□□□ 0.37
Atg4d-201ENSMUST00000065005 PtprkP35822 1457 aa17.38■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Usp37Q8C0R0 979 aa17.37■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Ift122Q6NWV3 1182 aa17.37■□□□□ 0.37
Atg4d-201ENSMUST00000065005 SfpqQ8VIJ6 699 aaKnown RBP17.37■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Pik3ap1Q9EQ32 811 aa17.37■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Ppp1r9aH3BJD6 1292 aa17.37■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Casp1P29452 402 aa17.37■□□□□ 0.37
Atg4d-201ENSMUST00000065005 Paxbp1P58501 919 aa17.37■□□□□ 0.37
Retrieved 100 of 22,080 RNA–protein pairs in 40.6 ms