RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Cyp2ab1S4R196 498 aa8.47□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Gpr101Q80T62 511 aa8.46□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Sh3tc1G3X9F6 1346 aa8.46□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Gdf11Q9Z1W4 405 aa8.46□□□□□ -1.05
Bdnf-201ENSMUST00000053317 Bcl9lQ67FY2 1494 aa8.46□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Large2Q5XPT3 690 aa8.46□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Scaf8Q6DID3 1268 aa8.46□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Tut1Q8R3F9 869 aa8.46□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Tnrc6cQ3UHC0 1690 aaKnown RBP8.46□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Nwd2Q6P5U7 1742 aa8.46□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Znf710Q3U288 666 aa8.46□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Itga6Q61739 1091 aa8.46□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Dhx38Q80X98 1228 aa8.46□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Znf18Q810A1 556 aa8.46□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Tmem119Q8R138 280 aa8.46□□□□□ -1.06
Bdnf-201ENSMUST00000053317 HnrnpuQ8VEK3 800 aaKnown RBP8.46□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Dydc2Q9D3X8 139 aa8.46□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Ltb4r2Q9JJL9 360 aa8.46□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Gja10Q9WUS4 505 aa8.46□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Disp3A3KFU9 1347 aa8.45□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Ltv1Q6NSQ7 470 aaKnown RBP8.45□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Chl1P70232 1209 aa8.45□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Chrna5Q2MKA5 467 aa8.45□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Gtpbp6Q3U6U5 514 aa8.45□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Trim52Q8CDV4 233 aa8.45□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Prr29B1ARI9 187 aa8.45□□□□□ -1.06
Bdnf-201ENSMUST00000053317 PrimpolQ6P1E7 537 aa8.45□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Fchsd1Q6PFY1 688 aa8.45□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Rbm17Q8JZX4 405 aaKnown RBP8.45□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Ppp1r42Q8R1Z4 357 aa8.45□□□□□ -1.06
Bdnf-201ENSMUST00000053317 CoblQ5NBX1 1337 aaKnown RBP8.45□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Mybbp1aQ7TPV4 1344 aaKnown RBP8.45□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Klrk1O54709 232 aa8.44□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Snai1Q02085 264 aa8.44□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Atp2b4Q6Q477 1205 aa8.44□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Rps8P62242 208 aaKnown RBP8.44□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Adora1Q60612 326 aa8.44□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Edc3Q8K2D3 508 aaKnown RBP8.44□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Tlr7P58681 1050 aa8.44□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Zbtb45Q52KG4 520 aa8.44□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Smarca5Q91ZW3 1051 aaKnown RBP8.44□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Marf1Q8BJ34 1730 aaKnown RBP8.44□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Cacna1sQ02789 1880 aa8.43□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Cyp2d11P24457 504 aa8.43□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Mex3cQ05A36 652 aaKnown RBP8.43□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Ncbp3Q8BZR9 615 aaKnown RBP8.43□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Cdca7Q9D0M2 382 aa8.43□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Tet3Q8BG87 1668 aa8.43□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Zbtb38Q3LR78 1197 aa8.43□□□□□ -1.06
Bdnf-201ENSMUST00000053317 SfswapQ3USH5 945 aaKnown RBP8.43□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Pdzph1Q8BGR1 1238 aa8.43□□□□□ -1.06
Bdnf-201ENSMUST00000053317 NsmfQ99NF2 532 aa8.43□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Eif3aP23116 1344 aaKnown RBP8.43□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Znf326O88291 580 aa8.43□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Hsp90b1P08113 802 aaKnown RBP8.43□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Celf1P28659 486 aaKnown RBP8.43□□□□□ -1.06
Bdnf-201ENSMUST00000053317 MvpQ9EQK5 861 aa8.43□□□□□ -1.06
Bdnf-201ENSMUST00000053317 ScaperF8VQ70 1398 aaKnown RBP8.42□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Timm10P62073 90 aa8.42□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Prom2Q3UUY6 835 aa8.42□□□□□ -1.06
Bdnf-201ENSMUST00000053317 ParvgQ9ERD8 331 aa8.42□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Plekho1Q9JIY0 408 aa8.42□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Usp48Q3V0C5 1052 aa8.42□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Bend3Q6PAL0 825 aa8.42□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Ncoa5Q91W39 579 aaKnown RBP8.42□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Ipo9Q91YE6 1041 aa8.42□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Tns2Q8CGB6 1400 aa8.42□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Ahnak2E9PYB0 1738 aaKnown RBP8.42□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Adamtsl1Q8BLI0 1745 aa8.42□□□□□ -1.06
Bdnf-201ENSMUST00000053317 MypnQ5DTJ9 1315 aa8.42□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Golgb1E9PVZ8 3238 aa8.42□□□□□ -1.06
Bdnf-201ENSMUST00000053317 ChgaP26339 463 aaKnown RBP8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Tom1l2Q5SRX1 507 aa8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Stk3Q9JI10 497 aa8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Adarb2Q9JI20 745 aa8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Ets1P27577 440 aa8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Cyp19a1P28649 503 aa8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Nedd4P46935 887 aaKnown RBP8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Gja5Q01231 358 aa8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 FktnQ8R507 461 aa8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Nphp1Q9QY53 687 aa8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 MetP16056 1379 aa8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Erbb4Q61527 1308 aa8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Oas2E9Q9A9 742 aa8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Snrpa1P57784 255 aaKnown RBP8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Tgfb1i1Q62219 461 aa8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Pram1Q6BCL1 675 aa8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Clca2Q8BG22 942 aa8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Strip1Q8C079 837 aa8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Slc26a8Q8R0C3 999 aa8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Sh3bp5Q9Z131 463 aa8.41□□□□□ -1.06
Bdnf-201ENSMUST00000053317 1700029H14RikE9PY36 240 aa8.4□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Erich6bQ9D4S6 220 aa8.4□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Letm1Q9Z2I0 738 aa8.4□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Siglec1Q62230 1695 aa8.4□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Zkscan8Q8BSL0 588 aa8.4□□□□□ -1.06
Bdnf-201ENSMUST00000053317 Rassf8Q8CJ96 419 aa8.4□□□□□ -1.06
Bdnf-201ENSMUST00000053317 XpcP51612 930 aa8.4□□□□□ -1.07
Bdnf-201ENSMUST00000053317 NfixP70257 488 aa8.4□□□□□ -1.07
Bdnf-201ENSMUST00000053317 RarsQ9D0I9 660 aaKnown RBP8.4□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 21.9 ms